Examples with Knowledge2 edu.cmu.tetrad.data.Knowledge2 used on opensource projects

Example 21 with Knowledge2

use of edu.cmu.tetrad.data.Knowledge2 in project tetrad by cmu-phil.

the class VcpcFastRunner method execute.

// ===================PUBLIC METHODS OVERRIDING ABSTRACT================//
public void execute() {
    IKnowledge knowledge = (IKnowledge) getParams().get("knowledge", new Knowledge2());
    Parameters searchParams = getParams();
    Parameters params = searchParams;
    VcpcFast fvcpc = new VcpcFast(getIndependenceTest());
    fvcpc.setKnowledge(knowledge);
    fvcpc.setAggressivelyPreventCycles(this.isAggressivelyPreventCycles());
    fvcpc.setDepth(params.getInt("depth", -1));
    if (independenceFactsModel != null) {
        fvcpc.setFacts(independenceFactsModel.getFacts());
    }
    Graph graph = fvcpc.search();
    if (getSourceGraph() != null) {
        GraphUtils.arrangeBySourceGraph(graph, getSourceGraph());
    } else if (knowledge.isDefaultToKnowledgeLayout()) {
        SearchGraphUtils.arrangeByKnowledgeTiers(graph, knowledge);
    } else {
        GraphUtils.circleLayout(graph, 200, 200, 150);
    }
    setResultGraph(graph);
    setVcpcFastFields(fvcpc);
}

Example 22 with Knowledge2

use of edu.cmu.tetrad.data.Knowledge2 in project tetrad by cmu-phil.

the class VcpcFastRunner method getMeekRules.

public ImpliedOrientation getMeekRules() {
    MeekRules meekRules = new MeekRules();
    meekRules.setAggressivelyPreventCycles(this.isAggressivelyPreventCycles());
    meekRules.setKnowledge((IKnowledge) getParams().get("knowledge", new Knowledge2()));
    return meekRules;
}

Example 23 with Knowledge2

use of edu.cmu.tetrad.data.Knowledge2 in project tetrad by cmu-phil.

the class PcLocalRunner method getMeekRules.

public ImpliedOrientation getMeekRules() {
    MeekRules rules = new MeekRules();
    rules.setAggressivelyPreventCycles(isAggressivelyPreventCycles());
    rules.setKnowledge((IKnowledge) getParams().get("knowledge", new Knowledge2()));
    return rules;
}

Example 24 with Knowledge2

use of edu.cmu.tetrad.data.Knowledge2 in project tetrad by cmu-phil.

the class VcpcAltRunner method getMeekRules.

public ImpliedOrientation getMeekRules() {
    MeekRules meekRules = new MeekRules();
    meekRules.setAggressivelyPreventCycles(this.isAggressivelyPreventCycles());
    meekRules.setKnowledge((IKnowledge) getParams().get("knowledge", new Knowledge2()));
    return meekRules;
}

Example 25 with Knowledge2

use of edu.cmu.tetrad.data.Knowledge2 in project tetrad by cmu-phil.

the class VcpcRunner method getMeekRules.

public ImpliedOrientation getMeekRules() {
    MeekRules meekRules = new MeekRules();
    meekRules.setAggressivelyPreventCycles(this.isAggressivelyPreventCycles());
    meekRules.setKnowledge((IKnowledge) getParams().get("knowledge", new Knowledge2()));
    return meekRules;
}