Examples with TransformationException eu.esdihumboldt.hale.common.align.transformation.function.TransformationException used on opensource projects

Example 26 with TransformationException

use of eu.esdihumboldt.hale.common.align.transformation.function.TransformationException in project hale by halestudio.

the class TargetCollector method toMultiValue.

/**
 * Transforms the closures added to this collector to a {@link MultiValue}
 * using the supplied builder.
 *
 * @param builder the instance builder for creating target instances
 * @param type the type of the instance to create
 * @param log the log
 * @return a result value for all closures added to this collector
 * @throws TransformationException if some of the collected targets do not
 *             match the specified type
 */
public MultiValue toMultiValue(InstanceBuilder builder, TypeDefinition type, SimpleLog log) throws TransformationException {
    MultiValue result = new MultiValue(size());
    // a) closures not allowed if the target is no instance
    if (containsClosures && type.getChildren().isEmpty()) {
        throw new TransformationException("An instance is not applicable for the target.");
    }
    // b) values not allowed if the target may not have a value
    if (containsValues && !type.getConstraint(HasValueFlag.class).isEnabled() && !type.getConstraint(AugmentedValueFlag.class).isEnabled()) {
        // this may be desired, e.g. when producing geometries for GML
        if (containsGeometries) {
            // only warning message for geometries
            log.warn("Value provided for target that does not allow a value according to the schema, contains geometries");
        } else {
            // instead of a hard error, we just log an error
            log.error("Value provided for target that does not allow a value according to the schema");
        }
    }
    for (TargetData data : targetData) {
        Object value;
        if (data.instance != null) {
            Instance instance = data.instance;
            // value as instance value
            if (data.value != null && instance instanceof MutableInstance) {
                ((MutableInstance) instance).setValue(data.value);
            }
            value = instance;
        } else {
            value = data.value;
        }
        result.add(value);
    }
    return result;
}

Example 27 with TransformationException

use of eu.esdihumboldt.hale.common.align.transformation.function.TransformationException in project hale by halestudio.

the class DateExtraction method evaluate.

/**
 * @see eu.esdihumboldt.hale.common.align.transformation.function.impl.AbstractSingleTargetPropertyTransformation#evaluate(java.lang.String,
 *      eu.esdihumboldt.hale.common.align.transformation.engine.TransformationEngine,
 *      com.google.common.collect.ListMultimap, java.lang.String,
 *      eu.esdihumboldt.hale.common.align.model.impl.PropertyEntityDefinition,
 *      java.util.Map,
 *      eu.esdihumboldt.hale.common.align.transformation.report.TransformationLog)
 */
@Override
protected Object evaluate(String transformationIdentifier, TransformationEngine engine, ListMultimap<String, PropertyValue> variables, String resultName, PropertyEntityDefinition resultProperty, Map<String, String> executionParameters, TransformationLog log) throws TransformationException {
    if (getParameters() == null || getParameters().get(PARAMETER_DATE_FORMAT) == null || getParameters().get(PARAMETER_DATE_FORMAT).isEmpty()) {
        throw new TransformationException(MessageFormat.format("Mandatory parameter {0} not defined", PARAMETER_DATE_FORMAT));
    }
    String dateFormat = getParameters().get(PARAMETER_DATE_FORMAT).get(0).as(String.class);
    // replace transformation variables in date format
    dateFormat = getExecutionContext().getVariables().replaceVariables(dateFormat);
    String sourceString = variables.values().iterator().next().getValueAs(String.class);
    SimpleDateFormat sdf = new SimpleDateFormat(dateFormat);
    try {
        return sdf.parse(sourceString);
    } catch (ParseException pe) {
        throw new TransformationException("Error parsing the source string", pe);
    }
}

Example 28 with TransformationException

use of eu.esdihumboldt.hale.common.align.transformation.function.TransformationException in project hale by halestudio.

the class ConceptualSchemaTransformer method doTypeTransformation.

/**
 * Execute a type transformation based on single type cell
 *
 * @param transformation the transformation to use
 * @param typeCell the type cell
 * @param target the target instance sink
 * @param source the source instances
 * @param alignment the alignment
 * @param engines the engine manager
 * @param transformer the property transformer
 * @param context the transformation execution context
 * @param reporter the reporter
 * @param progressIndicator the progress indicator
 */
@SuppressWarnings({ "rawtypes", "unchecked" })
protected void doTypeTransformation(TypeTransformationFactory transformation, Cell typeCell, InstanceCollection source, InstanceSink target, Alignment alignment, EngineManager engines, PropertyTransformer transformer, TransformationContext context, TransformationReporter reporter, ProgressIndicator progressIndicator) {
    TransformationLog cellLog = new CellLog(reporter, typeCell);
    TypeTransformation<?> function;
    try {
        function = transformation.createExtensionObject();
    } catch (Exception e) {
        reporter.error(new TransformationMessageImpl(typeCell, "Error creating transformation function.", e));
        return;
    }
    TransformationEngine engine = engines.get(transformation.getEngineId(), cellLog);
    if (engine == null) {
        // TODO instead try another transformation
        cellLog.error(cellLog.createMessage("Skipping type transformation: No matching transformation engine found", null));
        return;
    }
    // prepare transformation configuration
    ListMultimap<String, Type> targetTypes = ArrayListMultimap.create();
    for (Entry<String, ? extends Entity> entry : typeCell.getTarget().entries()) {
        targetTypes.put(entry.getKey(), (Type) entry.getValue());
    }
    ListMultimap<String, ParameterValue> parameters = typeCell.getTransformationParameters();
    if (parameters != null) {
        parameters = Multimaps.unmodifiableListMultimap(parameters);
    }
    Map<String, String> executionParameters = transformation.getExecutionParameters();
    // break on cancel
    if (progressIndicator.isCanceled()) {
        return;
    }
    ResourceIterator<FamilyInstance> iterator;
    if (typeCell.getSource() == null || typeCell.getSource().isEmpty()) {
        // type cell w/o source
        // -> execute exactly once w/ null source
        source = null;
        iterator = new GenericResourceIteratorAdapter<Object, FamilyInstance>(Collections.singleton(null).iterator()) {

            @Override
            protected FamilyInstance convert(Object next) {
                return null;
            }
        };
    } else {
        // Step 1: selection
        // Select only instances that are relevant for the transformation.
        source = source.select(new TypeCellFilter(typeCell));
        // Step 2: partition
        // use InstanceHandler if available - for example merge or join
        function.setExecutionContext(context.getCellContext(typeCell));
        InstanceHandler instanceHandler = function.getInstanceHandler();
        if (instanceHandler != null) {
            injectTransformationContext(instanceHandler, context);
            progressIndicator.setCurrentTask("Perform instance partitioning");
            try {
                iterator = instanceHandler.partitionInstances(source, transformation.getFunctionId(), engine, parameters, executionParameters, cellLog);
            } catch (TransformationException e) {
                cellLog.error(cellLog.createMessage("Type transformation: partitioning failed", e));
                return;
            }
        } else {
            // else just use every instance as is
            iterator = new GenericResourceIteratorAdapter<Instance, FamilyInstance>(source.iterator()) {

                @Override
                protected FamilyInstance convert(Instance next) {
                    return new FamilyInstanceImpl(next);
                }
            };
        }
    }
    progressIndicator.setCurrentTask("Execute type transformations");
    try {
        while (iterator.hasNext()) {
            // break on cancel
            if (progressIndicator.isCanceled()) {
                return;
            }
            function.setSource(iterator.next());
            function.setPropertyTransformer(transformer);
            function.setParameters(parameters);
            function.setTarget(targetTypes);
            function.setExecutionContext(context.getCellContext(typeCell));
            try {
                ((TypeTransformation) function).execute(transformation.getFunctionId(), engine, executionParameters, cellLog, typeCell);
            } catch (TransformationException e) {
                cellLog.error(cellLog.createMessage("Type transformation failed, skipping instance.", e));
            }
        }
    } finally {
        iterator.close();
    }
}

Example 29 with TransformationException

use of eu.esdihumboldt.hale.common.align.transformation.function.TransformationException in project hale by halestudio.

the class AssignFromCollector method evaluate.

/**
 * @see eu.esdihumboldt.hale.common.align.transformation.function.impl.AbstractSingleTargetPropertyTransformation#evaluate(java.lang.String,
 *      eu.esdihumboldt.hale.common.align.transformation.engine.TransformationEngine,
 *      com.google.common.collect.ListMultimap, java.lang.String,
 *      eu.esdihumboldt.hale.common.align.model.impl.PropertyEntityDefinition,
 *      java.util.Map,
 *      eu.esdihumboldt.hale.common.align.transformation.report.TransformationLog)
 */
@Override
protected Object evaluate(String transformationIdentifier, TransformationEngine engine, ListMultimap<String, PropertyValue> variables, String resultName, PropertyEntityDefinition resultProperty, Map<String, String> executionParameters, TransformationLog log) throws TransformationException, NoResultException {
    // XXX check anchor?
    final Collector mainCollector = (Collector) getExecutionContext().getTransformationContext().get(ContextHelpers.KEY_COLLECTOR);
    if (mainCollector == null) {
        throw new TransformationException("Fatal: No collector has been created yet. Check function priority.");
    }
    final ParameterValue collectorName = getParameterChecked(PARAMETER_COLLECTOR);
    if (collectorName == null || collectorName.isEmpty()) {
        throw new TransformationException("Fatal: No collector name was specified.");
    }
    final Collector collector = mainCollector.getAt(collectorName.getValue().toString());
    if (collector == null) {
        throw new TransformationException(MessageFormat.format("Error retrieving collector \"{0}\"", collectorName.getValue().toString()));
    } else if (collector.values().isEmpty()) {
        log.warn(new TransformationMessageImpl(getCell(), MessageFormat.format("Collector \"{0}\" contains no values. If this is unexpected, check the spelling of the collector name and the priority of the transformation function.", collectorName.getStringRepresentation()), null));
    }
    // Determine where to assign the collected values
    final TypeDefinition resultPropertyType = resultProperty.getDefinition().getPropertyType();
    final PropertyDefinition targetProperty;
    final ResultStrategy resultStrategy;
    if (resultPropertyType.getConstraint(HasValueFlag.class).isEnabled()) {
        // The result property can take values, therefore assign directly to
        // property
        targetProperty = resultProperty.getDefinition();
        // No instance creation is required in this case
        resultStrategy = ResultStrategy.USE_VALUE;
    } else {
        // Find child element/attribute that can be assigned the reference
        targetProperty = Optional.ofNullable(findReferenceChildProperty(resultPropertyType)).orElseThrow(() -> new TransformationException("Fatal: No child property could be found to assign a reference to."));
        resultStrategy = ResultStrategy.BUILD_INSTANCE;
    }
    List<Object> collectedReferences = helper.extractCollectedValues(collector);
    // Process collected values if target property is a reference, otherwise
    // use plain values
    final Function<Object, Object> referenceStrategy;
    if (targetProperty.getConstraint(Reference.class).isReference()) {
        final Reference referenceConstraint = targetProperty.getConstraint(Reference.class);
        // Use the idToReference method to construct the reference
        referenceStrategy = referenceConstraint::idToReference;
    } else {
        referenceStrategy = Function.identity();
    }
    MultiValue result = new MultiValue();
    collectedReferences.forEach(ref -> result.add(resultStrategy.createResult(resultPropertyType, targetProperty, referenceStrategy.apply(ref))));
    return result;
}

Example 30 with TransformationException

use of eu.esdihumboldt.hale.common.align.transformation.function.TransformationException in project hale by halestudio.

the class InlineTransformation method evaluate.

@Override
protected Object evaluate(String transformationIdentifier, TransformationEngine engine, ListMultimap<String, PropertyValue> variables, String resultName, PropertyEntityDefinition resultProperty, Map<String, String> executionParameters, TransformationLog log) throws TransformationException, NoResultException {
    List<PropertyValue> sources = variables.get(null);
    if (sources.isEmpty()) {
        throw new NoResultException("No source available to transform");
    }
    PropertyValue source = sources.get(0);
    Object sourceValue = source.getValue();
    if (sourceValue == null) {
        throw new NoResultException("Source value is null");
    }
    if (!(sourceValue instanceof Instance)) {
        throw new TransformationException("Sources for inline transformation must be instances");
    }
    Instance sourceInstance = (Instance) sourceValue;
    TypeDefinition sourceType = sourceInstance.getDefinition();
    // get the original alignment
    Alignment orgAlignment = getExecutionContext().getAlignment();
    MutableAlignment alignment = new DefaultAlignment(orgAlignment);
    // identify relevant type cell(s)
    MutableCell queryCell = new DefaultCell();
    ListMultimap<String, Type> sourceEntities = ArrayListMultimap.create();
    sourceEntities.put(null, new DefaultType(new TypeEntityDefinition(sourceType, SchemaSpaceID.SOURCE, null)));
    queryCell.setSource(sourceEntities);
    ListMultimap<String, Type> targetEntities = ArrayListMultimap.create();
    targetEntities.put(null, new DefaultType(new TypeEntityDefinition(resultProperty.getDefinition().getPropertyType(), SchemaSpaceID.TARGET, null)));
    queryCell.setTarget(targetEntities);
    Collection<? extends Cell> candidates = alignment.getTypeCells(queryCell);
    if (candidates.isEmpty()) {
        log.error(log.createMessage("No type transformations found for inline transformation", null));
        throw new NoResultException();
    }
    // filter alignment -> only keep relevant type relations
    List<Cell> allTypeCells = new ArrayList<>(alignment.getTypeCells());
    for (Cell cell : allTypeCells) {
        // remove cell
        alignment.removeCell(cell);
        if (!cell.getTransformationMode().equals(TransformationMode.disabled)) {
            // only readd if not disabled
            MutableCell copy = new DefaultCell(cell);
            if (candidates.contains(cell)) {
                // readd as active
                copy.setTransformationMode(TransformationMode.active);
            } else {
                // readd as passive
                copy.setTransformationMode(TransformationMode.passive);
            }
            alignment.addCell(copy);
        }
    }
    // prepare transformation input/output
    DefaultInstanceCollection sourceInstances = new DefaultInstanceCollection();
    sourceInstances.add(sourceInstance);
    DefaultInstanceSink target = new DefaultInstanceSink();
    // run transformation
    TransformationService ts = getExecutionContext().getService(TransformationService.class);
    if (ts == null) {
        throw new TransformationException("Transformation service not available for inline transformation");
    }
    ProgressIndicator progressIndicator = new LogProgressIndicator();
    TransformationReport report = ts.transform(alignment, sourceInstances, new ThreadSafeInstanceSink<InstanceSink>(target), getExecutionContext(), progressIndicator);
    // copy report messages
    log.importMessages(report);
    if (!report.isSuccess()) {
        // copy report messages
        log.importMessages(report);
        throw new TransformationException("Inline transformation failed");
    }
    // extract result
    List<Instance> targetList = target.getInstances();
    if (targetList.isEmpty()) {
        log.error(log.createMessage("Inline transformation yielded no result", null));
        throw new NoResultException("No result from inline transformation");
    }
    if (targetList.size() > 1) {
        log.error(log.createMessage("Inline transformation yielded multiple results, only first result is used", null));
    }
    return targetList.get(0);
}