Examples with ISpeciesRoot forestry.api.genetics.ISpeciesRoot used on opensource projects

Example 41 with ISpeciesRoot

use of forestry.api.genetics.ISpeciesRoot in project ForestryMC by ForestryMC.

the class FilterLogic method getValidDirections.

public Collection<EnumFacing> getValidDirections(ItemStack itemStack, EnumFacing from) {
    ISpeciesRoot root = AlleleManager.alleleRegistry.getSpeciesRoot(itemStack);
    IIndividual individual = null;
    ISpeciesType type = null;
    if (root != null) {
        individual = root.getMember(itemStack);
        type = root.getType(itemStack);
    }
    IFilterData filterData = new FilterData(root, individual, type);
    List<EnumFacing> validFacings = new LinkedList<>();
    for (EnumFacing facing : EnumFacing.VALUES) {
        if (facing == from) {
            continue;
        }
        if (isValid(facing, itemStack, filterData)) {
            validFacings.add(facing);
        }
    }
    return validFacings;
}

Example 42 with ISpeciesRoot

use of forestry.api.genetics.ISpeciesRoot in project Binnie by ForestryMC.

the class IsolatorLogic method onFinishTask.

@Override
protected void onFinishTask() {
    super.onFinishTask();
    final Random rand = this.getMachine().getWorld().rand;
    MachineUtil util = this.getUtil();
    final ISpeciesRoot root = AlleleManager.alleleRegistry.getSpeciesRoot(util.getStack(Isolator.SLOT_TARGET));
    if (root == null) {
        return;
    }
    final IIndividual individual = root.getMember(util.getStack(Isolator.SLOT_TARGET));
    if (individual == null) {
        return;
    }
    IChromosomeType[] karyotype = root.getKaryotype();
    IChromosomeType chromosome = karyotype[rand.nextInt(karyotype.length)];
    IGenome genome = individual.getGenome();
    IAllele allele = rand.nextBoolean() ? genome.getActiveAllele(chromosome) : genome.getInactiveAllele(chromosome);
    Gene gene = Gene.create(allele, chromosome, root);
    final ItemStack serum = ItemSequence.create(gene);
    util.setStack(Isolator.SLOT_RESULUT, serum);
    util.decreaseStack(Isolator.SLOT_SEQUENCER_VIAL, 1);
    if (rand.nextFloat() < TARGET_LOSS_CHANCE) {
        util.decreaseStack(Isolator.SLOT_TARGET, 1);
    }
    util.drainTank(Isolator.TANK_ETHANOL, ETHANOL_PER_PROCESS);
}

Example 43 with ISpeciesRoot

use of forestry.api.genetics.ISpeciesRoot in project Binnie by ForestryMC.

the class ToleranceSystem method alter.

public ItemStack alter(final ItemStack stack, final ItemStack acc) {
    final Random rand = new Random();
    final float effect = this.type.getEffect(acc);
    if (rand.nextFloat() > Math.abs(effect)) {
        return stack;
    }
    final IIndividual member = AlleleManager.alleleRegistry.getIndividual(stack);
    final IGenome genome = member.getGenome();
    final IAlleleTolerance tolAllele = (IAlleleTolerance) genome.getActiveAllele(this.chromosomeType);
    final Tolerance tol = Tolerance.get(tolAllele.getValue());
    final Tolerance newTol = Acclimatiser.alterTolerance(tol, effect);
    if (rand.nextFloat() > 1.0f / (-newTol.getBounds()[0] + newTol.getBounds()[1])) {
        return stack;
    }
    final ISpeciesRoot root = AlleleManager.alleleRegistry.getSpeciesRoot(stack);
    boolean setPrimary = rand.nextBoolean();
    boolean setSecondary = !setPrimary;
    Gene gene = new Gene(newTol.getAllele(), this.chromosomeType, root);
    Splicer.setGene(gene, stack, setPrimary, setSecondary);
    return stack;
}

Example 44 with ISpeciesRoot

use of forestry.api.genetics.ISpeciesRoot in project Binnie by ForestryMC.

the class ControlIndividualDisplay method setSpecies.

public void setSpecies(final IAlleleSpecies species, EnumDiscoveryState state) {
    final ISpeciesRoot speciesRoot = Binnie.GENETICS.getSpeciesRoot(species);
    final IBreedingSystem system = Binnie.GENETICS.getSystem(speciesRoot);
    final IAllele[] template = system.getSpeciesRoot().getTemplate(species);
    final IIndividual ind = system.getSpeciesRoot().templateAsIndividual(template);
    super.setItemStack(system.getSpeciesRoot().getMemberStack(ind, system.getDefaultType()));
    this.species = species;
    final GameProfile username = Window.get(this).getUsername();
    if (state == EnumDiscoveryState.UNDETERMINED) {
        state = (system.isSpeciesDiscovered(species, Window.get(this).getWorld(), username) ? EnumDiscoveryState.DISCOVERED : EnumDiscoveryState.UNDISCOVERED);
    }
    if (Window.get(this) instanceof WindowAbstractDatabase && ((WindowAbstractDatabase) Window.get(this)).isMaster()) {
        state = EnumDiscoveryState.SHOW;
    }
    this.discovered = state;
    this.addAttribute(Attribute.MOUSE_OVER);
}

Example 45 with ISpeciesRoot

use of forestry.api.genetics.ISpeciesRoot in project Binnie by ForestryMC.

the class ManagerGenetics method analyse.

public static ItemStack analyse(ItemStack stack, World world, GameProfile username) {
    if (!stack.isEmpty()) {
        ItemStack conv = Binnie.GENETICS.getConversionStack(stack).copy();
        if (!conv.isEmpty()) {
            conv.setCount(stack.getCount());
            stack = conv;
        }
        ISpeciesRoot root = AlleleManager.alleleRegistry.getSpeciesRoot(stack);
        if (root != null) {
            final IIndividual ind = root.getMember(stack);
            ind.analyze();
            IBreedingTracker breedingTracker = ind.getGenome().getSpeciesRoot().getBreedingTracker(world, username);
            breedingTracker.registerBirth(ind);
            final NBTTagCompound nbttagcompound = new NBTTagCompound();
            ind.writeToNBT(nbttagcompound);
            stack.setTagCompound(nbttagcompound);
            return stack;
        }
        if (stack.getItem() instanceof IItemAnalysable) {
            return ((IItemAnalysable) stack.getItem()).analyse(stack);
        }
    }
    return stack;
}