Examples with SingleAstigmatismErfGaussian2DFunction gdsc.smlm.function.gaussian.erf.SingleAstigmatismErfGaussian2DFunction used on opensource projects

Example 1 with SingleAstigmatismErfGaussian2DFunction

use of gdsc.smlm.function.gaussian.erf.SingleAstigmatismErfGaussian2DFunction in project GDSC-SMLM by aherbert.

the class FastMLEGradient2ProcedureTest method gradientCalculatorComputesGradient.

@Test
public void gradientCalculatorComputesGradient() {
    gradientCalculatorComputesGradient(new SingleFreeCircularErfGaussian2DFunction(blockWidth, blockWidth));
    // Use a reasonable z-depth function from the Smith, et al (2010) paper (page 377)
    double gamma = 0.389;
    double d = 0.531;
    double Ax = -0.0708;
    double Bx = -0.073;
    double Ay = 0.164;
    double By = 0.0417;
    HoltzerAstimatismZModel zModel = HoltzerAstimatismZModel.create(gamma, d, Ax, Bx, Ay, By);
    gradientCalculatorComputesGradient(new SingleAstigmatismErfGaussian2DFunction(blockWidth, blockWidth, zModel));
}

Example 2 with SingleAstigmatismErfGaussian2DFunction

use of gdsc.smlm.function.gaussian.erf.SingleAstigmatismErfGaussian2DFunction in project GDSC-SMLM by aherbert.

the class FastMLEJacobianGradient2ProcedureTest method gradientCalculatorComputesGradient.

@Test
public void gradientCalculatorComputesGradient() {
    gradientCalculatorComputesGradient(1, new SingleFreeCircularErfGaussian2DFunction(blockWidth, blockWidth));
    gradientCalculatorComputesGradient(2, new MultiFreeCircularErfGaussian2DFunction(2, blockWidth, blockWidth));
    // Use a reasonable z-depth function from the Smith, et al (2010) paper (page 377)
    double gamma = 0.389;
    double d = 0.531;
    double Ax = -0.0708;
    double Bx = -0.073;
    double Ay = 0.164;
    double By = 0.0417;
    HoltzerAstimatismZModel zModel = HoltzerAstimatismZModel.create(gamma, d, Ax, Bx, Ay, By);
    gradientCalculatorComputesGradient(1, new SingleAstigmatismErfGaussian2DFunction(blockWidth, blockWidth, zModel));
}