Examples with Document ihe.iti.xds_b._2007.ProvideAndRegisterDocumentSetRequestType.Document used on opensource projects

Example 1 with Document

use of ihe.iti.xds_b._2007.ProvideAndRegisterDocumentSetRequestType.Document in project nhin-d by DirectProject.

the class DirectDocuments method toProvideAndRegisterDocumentSetRequestType.

public ProvideAndRegisterDocumentSetRequestType toProvideAndRegisterDocumentSetRequestType() throws IOException {
    ProvideAndRegisterDocumentSetRequestType request = new ProvideAndRegisterDocumentSetRequestType();
    request.setSubmitObjectsRequest(this.getSubmitObjectsRequest());
    for (DirectDocument2 document : documents) {
        if (document.getData() != null) {
            DataSource source = new ByteArrayDataSource(document.getData(), document.getMetadata().getMimeType());
            DataHandler dhnew = new DataHandler(source);
            Document pdoc = new Document();
            pdoc.setValue(dhnew);
            String id = document.getMetadata().getId();
            pdoc.setId(id);
            request.getDocument().add(pdoc);
        }
    }
    return request;
}

Example 2 with Document

use of ihe.iti.xds_b._2007.ProvideAndRegisterDocumentSetRequestType.Document in project nhin-d by DirectProject.

the class DefaultXdmXdsTransformer method transform.

/*
     * (non-Javadoc)
     * 
     * @see org.nhindirect.transform.XdmXdsTransformer#transform(java.io.File)
     */
@Override
public ProvideAndRegisterDocumentSetRequestType transform(File file) throws TransformationException {
    LOGGER.trace("Begin transformation of XDM to XDS (file)");
    String docId = null;
    ZipFile zipFile = null;
    String docName = getDocName(file);
    if (docName != null) {
        XDM_FILENAME_DATA = docName;
    }
    ProvideAndRegisterDocumentSetRequestType prsr = new ProvideAndRegisterDocumentSetRequestType();
    try {
        zipFile = new ZipFile(file, ZipFile.OPEN_READ);
        Enumeration<? extends ZipEntry> zipEntries = zipFile.entries();
        ZipEntry zipEntry = null;
        // load the ZIP archive into memory
        while (zipEntries.hasMoreElements()) {
            zipEntry = zipEntries.nextElement();
            String zname = zipEntry.getName();
            LOGGER.trace("Processing a ZipEntry " + zname);
            if (!zipEntry.isDirectory()) {
                String subsetDirspec = getSubmissionSetDirspec(zipEntry.getName());
                // Read metadata
                if (matchName(zname, subsetDirspec, XDM_FILENAME_METADATA)) {
                    ByteArrayOutputStream byteArrayOutputStream = readData(zipFile, zipEntry);
                    SubmitObjectsRequest submitObjectRequest = (SubmitObjectsRequest) XmlUtils.unmarshal(byteArrayOutputStream.toString(), oasis.names.tc.ebxml_regrep.xsd.lcm._3.ObjectFactory.class);
                    prsr.setSubmitObjectsRequest(submitObjectRequest);
                    docId = getDocId(submitObjectRequest);
                } else // Read data
                if (matchName(zname, subsetDirspec, XDM_FILENAME_DATA)) {
                    ByteArrayOutputStream byteArrayOutputStream = readData(zipFile, zipEntry);
                    DataSource source = new ByteArrayDataSource(byteArrayOutputStream.toByteArray(), MimeType.APPLICATION_XML + "; charset=UTF-8");
                    DataHandler dhnew = new DataHandler(source);
                    Document pdoc = new Document();
                    pdoc.setValue(dhnew);
                    pdoc.setId(docId);
                    List<Document> docs = prsr.getDocument();
                    docs.add(pdoc);
                }
            }
            if (!prsr.getDocument().isEmpty()) {
                ((Document) prsr.getDocument().get(0)).setId(zname);
            }
        }
        zipFile.close();
    } catch (Exception e) {
        if (LOGGER.isErrorEnabled()) {
            LOGGER.error("Unable to complete transformation.", e);
        }
        throw new TransformationException("Unable to complete transformation.", e);
    }
    return prsr;
}

Example 3 with Document

use of ihe.iti.xds_b._2007.ProvideAndRegisterDocumentSetRequestType.Document in project nhin-d by DirectProject.

the class DefaultXdsDirectDocumentsTransformer method transform.

@Override
public DirectDocuments transform(ProvideAndRegisterDocumentSetRequestType provideAndRegisterDocumentSetRequestType) throws TransformationException {
    DirectDocuments documents = new DirectDocuments();
    try {
        documents.setValues(provideAndRegisterDocumentSetRequestType.getSubmitObjectsRequest());
    } catch (MetadataException e) {
        throw new TransformationException("Unable to complete transformation due to metadata error", e);
    }
    for (ihe.iti.xds_b._2007.ProvideAndRegisterDocumentSetRequestType.Document document : provideAndRegisterDocumentSetRequestType.getDocument()) {
        byte[] data = null;
        try {
            DataHandler dataHandler = document.getValue();
            ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
            dataHandler.writeTo(outputStream);
            data = outputStream.toByteArray();
        } catch (IOException e) {
            throw new TransformationException("Unable to complete transformation due to document IO error", e);
        }
        DirectDocument2 doc = documents.getDocumentByUniqueId(document.getId());
        if (doc != null) {
            doc.setData(data);
        } else {
            documents.getDocumentById(document.getId()).setData(data);
        }
    }
    return documents;
}

Example 4 with Document

use of ihe.iti.xds_b._2007.ProvideAndRegisterDocumentSetRequestType.Document in project hale by halestudio.

the class TestModelRifToRifTranslator method testTranslateExample3CPComplexFilter.

/**
 * Tests that it is possible to translate the example 3 CP source dataset,
 * including a slightly more complex predicate filter.
 *
 * @throws TranslationException
 *             if any errors occurred during the translation
 * @throws JAXBException
 *             if unable to write out a DOM document containing the RIF-PRD
 */
@Test
public void testTranslateExample3CPComplexFilter() throws TranslationException, JAXBException {
    URL url = getClass().getClassLoader().getResource(// $NON-NLS-1$
    "com/onespatial/jrc/tnstg/proto/oml_to_rif/alignments/example3_complex_logical_filter.goml");
    org.w3._2007.rif.Document doc = translator.translate(url);
    assertNotNull(doc);
    assertNotNull(doc.getPayload());
    assertNotNull(doc.getPayload().getGroup());
    assertNotNull(doc.getPayload().getGroup().getSentence());
    assertThat(doc.getPayload().getGroup().getSentence().size(), is(1));
    assertNotNull(doc.getPayload().getGroup().getSentence().get(0));
    checkJavaBindings(doc);
    writeDom(getDomFromRif(doc), System.out);
}

Example 5 with Document

use of ihe.iti.xds_b._2007.ProvideAndRegisterDocumentSetRequestType.Document in project hale by halestudio.

the class TestModelRifToRifTranslator method testTranslateExample3CPSimpleFilter.

/**
 * Tests that it is possible to translate the example 3 CP source dataset,
 * including a simple predicate filter.
 *
 * @throws TranslationException
 *             if any errors occurred during the translation
 * @throws JAXBException
 *             if unable to write out a DOM document containing the RIF-PRD
 */
@Test
public void testTranslateExample3CPSimpleFilter() throws TranslationException, JAXBException {
    URL url = getClass().getClassLoader().getResource(// $NON-NLS-1$
    "com/onespatial/jrc/tnstg/proto/oml_to_rif/alignments/example3_cp_filter.goml");
    org.w3._2007.rif.Document doc = translator.translate(url);
    assertNotNull(doc);
    assertNotNull(doc.getPayload());
    assertNotNull(doc.getPayload().getGroup());
    assertNotNull(doc.getPayload().getGroup().getSentence());
    assertThat(doc.getPayload().getGroup().getSentence().size(), is(1));
    assertNotNull(doc.getPayload().getGroup().getSentence().get(0));
    checkJavaBindings(doc);
    writeDom(getDomFromRif(doc), System.out);
}