Examples with StripeFooter io.prestosql.orc.metadata.StripeFooter used on opensource projects

Example 1 with StripeFooter

use of io.prestosql.orc.metadata.StripeFooter in project hetu-core by openlookeng.

the class OrcWriter method bufferStripeData.

/**
 * Collect the data for for the stripe.  This is not the actual data, but
 * instead are functions that know how to write the data.
 */
private List<OrcDataOutput> bufferStripeData(long stripeStartOffset, FlushReason flushReason) throws IOException {
    if (stripeRowCount == 0) {
        verify(flushReason == CLOSED, "An empty stripe is not allowed");
        // column writers must be closed or the reset call will fail
        columnWriters.forEach(ColumnWriter::close);
        return ImmutableList.of();
    }
    if (rowGroupRowCount > 0) {
        finishRowGroup();
    }
    // convert any dictionary encoded column with a low compression ratio to direct
    dictionaryCompressionOptimizer.finalOptimize(bufferedBytes);
    columnWriters.forEach(ColumnWriter::close);
    List<OrcDataOutput> outputData = new ArrayList<>();
    List<Stream> allStreams = new ArrayList<>(columnWriters.size() * 3);
    // get index streams
    long indexLength = 0;
    for (ColumnWriter columnWriter : columnWriters) {
        for (StreamDataOutput indexStream : columnWriter.getIndexStreams(metadataWriter)) {
            // The ordering is critical because the stream only contain a length with no offset.
            outputData.add(indexStream);
            allStreams.add(indexStream.getStream());
            indexLength += indexStream.size();
        }
    }
    // data streams (sorted by size)
    long dataLength = 0;
    List<StreamDataOutput> dataStreams = new ArrayList<>(columnWriters.size() * 2);
    for (ColumnWriter columnWriter : columnWriters) {
        List<StreamDataOutput> streams = columnWriter.getDataStreams();
        dataStreams.addAll(streams);
        dataLength += streams.stream().mapToLong(StreamDataOutput::size).sum();
    }
    Collections.sort(dataStreams);
    // add data streams
    for (StreamDataOutput dataStream : dataStreams) {
        // The ordering is critical because the stream only contain a length with no offset.
        outputData.add(dataStream);
        allStreams.add(dataStream.getStream());
    }
    Map<OrcColumnId, ColumnEncoding> columnEncodings = new HashMap<>();
    columnWriters.forEach(columnWriter -> columnEncodings.putAll(columnWriter.getColumnEncodings()));
    Map<OrcColumnId, ColumnStatistics> columnStatistics = new HashMap<>();
    columnWriters.forEach(columnWriter -> columnStatistics.putAll(columnWriter.getColumnStripeStatistics()));
    // the 0th column is a struct column for the whole row
    columnEncodings.put(ROOT_COLUMN, new ColumnEncoding(DIRECT, 0));
    columnStatistics.put(ROOT_COLUMN, new ColumnStatistics((long) stripeRowCount, 0, null, null, null, null, null, null, null, null));
    // add footer
    StripeFooter stripeFooter = new StripeFooter(allStreams, toColumnMetadata(columnEncodings, orcTypes.size()), ZoneId.of("UTC"));
    Slice footer = metadataWriter.writeStripeFooter(stripeFooter);
    outputData.add(createDataOutput(footer));
    // create final stripe statistics
    StripeStatistics statistics = new StripeStatistics(toColumnMetadata(columnStatistics, orcTypes.size()));
    recordValidation(validation -> validation.addStripeStatistics(stripeStartOffset, statistics));
    StripeInformation stripeInformation = new StripeInformation(stripeRowCount, stripeStartOffset, indexLength, dataLength, footer.length());
    ClosedStripe closedStripe = new ClosedStripe(stripeInformation, statistics);
    closedStripes.add(closedStripe);
    closedStripesRetainedBytes += closedStripe.getRetainedSizeInBytes();
    recordValidation(validation -> validation.addStripe(stripeInformation.getNumberOfRows()));
    stats.recordStripeWritten(flushReason, stripeInformation.getTotalLength(), stripeInformation.getNumberOfRows(), dictionaryCompressionOptimizer.getDictionaryMemoryBytes());
    return outputData;
}

Example 2 with StripeFooter

use of io.prestosql.orc.metadata.StripeFooter in project hetu-core by openlookeng.

the class StripeReader method readStripe.

public Stripe readStripe(StripeInformation stripe, AggregatedMemoryContext systemMemoryUsage) throws IOException {
    // read the stripe footer
    OrcStripeFooterCacheKey cacheKey = new OrcStripeFooterCacheKey();
    cacheKey.setOrcDataSourceId(new OrcDataSourceIdWithTimeStamp(orcDataSource.getId(), orcDataSource.getLastModifiedTime()));
    cacheKey.setStripeOffset(stripe.getOffset());
    StripeFooter stripeFooter;
    if (orcCacheProperties.isStripeFooterCacheEnabled()) {
        try {
            stripeFooter = orcCacheStore.getStripeFooterCache().get(cacheKey, () -> this.readStripeFooter(stripe, systemMemoryUsage));
        } catch (UncheckedExecutionException | ExecutionException executionException) {
            handleCacheLoadException(executionException);
            log.debug(executionException.getCause(), "Error while caching ORC stripe footer. Falling back to default flow");
            stripeFooter = readStripeFooter(stripe, systemMemoryUsage);
        }
    } else {
        stripeFooter = readStripeFooter(stripe, systemMemoryUsage);
    }
    ColumnMetadata<ColumnEncoding> columnEncodings = stripeFooter.getColumnEncodings();
    if (writeValidation.isPresent()) {
        writeValidation.get().validateTimeZone(orcDataSource.getId(), stripeFooter.getTimeZone());
    }
    ZoneId fileTimeZone = stripeFooter.getTimeZone();
    // get streams for selected columns
    Map<StreamId, Stream> streams = new HashMap<>();
    for (Stream stream : stripeFooter.getStreams()) {
        if (includedOrcColumnIds.contains(stream.getColumnId()) && isSupportedStreamType(stream, types.get(stream.getColumnId()).getOrcTypeKind())) {
            streams.put(new StreamId(stream), stream);
        }
    }
    // handle stripes with more than one row group
    boolean invalidCheckPoint = false;
    if (stripe.getNumberOfRows() > rowsInRowGroup) {
        // determine ranges of the stripe to read
        Map<StreamId, DiskRange> diskRanges = getDiskRanges(stripeFooter.getStreams());
        diskRanges = Maps.filterKeys(diskRanges, Predicates.in(streams.keySet()));
        // read the file regions
        Map<StreamId, OrcChunkLoader> streamsData = readDiskRanges(stripe.getOffset(), diskRanges, systemMemoryUsage);
        // read the bloom filter for each column
        Map<OrcColumnId, List<HashableBloomFilter>> bloomFilterIndexes = readBloomFilterIndexes(streams, streamsData, stripe);
        // read the row index for each column
        Map<StreamId, List<RowGroupIndex>> columnIndexes = readColumnIndexes(streams, streamsData, bloomFilterIndexes, stripe);
        if (writeValidation.isPresent()) {
            writeValidation.get().validateRowGroupStatistics(orcDataSource.getId(), stripe.getOffset(), columnIndexes);
        }
        // select the row groups matching the tuple domain
        Set<Integer> selectedRowGroups = selectRowGroups(stripe, columnIndexes);
        // if all row groups are skipped, return null
        if (selectedRowGroups.isEmpty()) {
            // set accounted memory usage to zero
            systemMemoryUsage.close();
            return null;
        }
        // value streams
        Map<StreamId, ValueInputStream<?>> valueStreams = createValueStreams(streams, streamsData, columnEncodings);
        // build the dictionary streams
        InputStreamSources dictionaryStreamSources = createDictionaryStreamSources(streams, valueStreams, columnEncodings);
        // build the row groups
        try {
            List<RowGroup> rowGroups = createRowGroups(stripe.getNumberOfRows(), streams, valueStreams, columnIndexes, selectedRowGroups, columnEncodings);
            return new Stripe(stripe.getNumberOfRows(), fileTimeZone, columnEncodings, rowGroups, dictionaryStreamSources);
        } catch (InvalidCheckpointException e) {
            // The ORC file contains a corrupt checkpoint stream treat the stripe as a single row group.
            invalidCheckPoint = true;
        }
    }
    // stripe only has one row group
    ImmutableMap.Builder<StreamId, DiskRange> diskRangesBuilder = ImmutableMap.builder();
    for (Entry<StreamId, DiskRange> entry : getDiskRanges(stripeFooter.getStreams()).entrySet()) {
        StreamId streamId = entry.getKey();
        if (streams.containsKey(streamId)) {
            diskRangesBuilder.put(entry);
        }
    }
    ImmutableMap<StreamId, DiskRange> diskRanges = diskRangesBuilder.build();
    // read the file regions
    Map<StreamId, OrcChunkLoader> streamsData = readDiskRanges(stripe.getOffset(), diskRanges, systemMemoryUsage);
    long minAverageRowBytes = 0;
    for (Entry<StreamId, Stream> entry : streams.entrySet()) {
        if (entry.getKey().getStreamKind() == ROW_INDEX) {
            List<RowGroupIndex> rowGroupIndexes;
            if (orcCacheProperties.isRowIndexCacheEnabled()) {
                OrcRowIndexCacheKey indexCacheKey = new OrcRowIndexCacheKey();
                indexCacheKey.setOrcDataSourceId(new OrcDataSourceIdWithTimeStamp(orcDataSource.getId(), orcDataSource.getLastModifiedTime()));
                indexCacheKey.setStripeOffset(stripe.getOffset());
                indexCacheKey.setStreamId(entry.getKey());
                try {
                    rowGroupIndexes = orcCacheStore.getRowIndexCache().get(indexCacheKey, () -> metadataReader.readRowIndexes(hiveWriterVersion, new OrcInputStream(streamsData.get(entry.getKey()))));
                } catch (UncheckedExecutionException | ExecutionException executionException) {
                    handleCacheLoadException(executionException);
                    log.debug(executionException.getCause(), "Error while caching row group indexes. Falling back to default flow");
                    rowGroupIndexes = metadataReader.readRowIndexes(hiveWriterVersion, new OrcInputStream(streamsData.get(entry.getKey())));
                }
            } else {
                rowGroupIndexes = metadataReader.readRowIndexes(hiveWriterVersion, new OrcInputStream(streamsData.get(entry.getKey())));
            }
            checkState(rowGroupIndexes.size() == 1 || invalidCheckPoint, "expect a single row group or an invalid check point");
            long totalBytes = 0;
            long totalRows = 0;
            for (RowGroupIndex rowGroupIndex : rowGroupIndexes) {
                ColumnStatistics columnStatistics = rowGroupIndex.getColumnStatistics();
                if (columnStatistics.hasMinAverageValueSizeInBytes()) {
                    totalBytes += columnStatistics.getMinAverageValueSizeInBytes() * columnStatistics.getNumberOfValues();
                    totalRows += columnStatistics.getNumberOfValues();
                }
            }
            if (totalRows > 0) {
                minAverageRowBytes += totalBytes / totalRows;
            }
        }
    }
    // value streams
    Map<StreamId, ValueInputStream<?>> valueStreams = createValueStreams(streams, streamsData, columnEncodings);
    // build the dictionary streams
    InputStreamSources dictionaryStreamSources = createDictionaryStreamSources(streams, valueStreams, columnEncodings);
    // build the row group
    ImmutableMap.Builder<StreamId, InputStreamSource<?>> builder = ImmutableMap.builder();
    for (Entry<StreamId, ValueInputStream<?>> entry : valueStreams.entrySet()) {
        builder.put(entry.getKey(), new ValueInputStreamSource<>(entry.getValue()));
    }
    RowGroup rowGroup = new RowGroup(0, 0, stripe.getNumberOfRows(), minAverageRowBytes, new InputStreamSources(builder.build()));
    return new Stripe(stripe.getNumberOfRows(), fileTimeZone, columnEncodings, ImmutableList.of(rowGroup), dictionaryStreamSources);
}

Example 3 with StripeFooter

use of io.prestosql.orc.metadata.StripeFooter in project hetu-core by openlookeng.

the class TestOrcWriter method testWriteOutputStreamsInOrder.

@Test
public void testWriteOutputStreamsInOrder() throws IOException {
    for (OrcWriteValidationMode validationMode : OrcWriteValidationMode.values()) {
        TempFile tempFile = new TempFile();
        OrcWriter writer = new OrcWriter(new OutputStreamOrcDataSink(new FileOutputStream(tempFile.getFile())), ImmutableList.of("test1", "test2", "test3", "test4", "test5"), ImmutableList.of(VARCHAR, VARCHAR, VARCHAR, VARCHAR, VARCHAR), NONE, new OrcWriterOptions().withStripeMinSize(new DataSize(0, MEGABYTE)).withStripeMaxSize(new DataSize(32, MEGABYTE)).withStripeMaxRowCount(ORC_STRIPE_SIZE).withRowGroupMaxRowCount(ORC_ROW_GROUP_SIZE).withDictionaryMaxMemory(new DataSize(32, MEGABYTE)), false, ImmutableMap.of(), true, validationMode, new OrcWriterStats(), Optional.empty(), Optional.empty());
        // write down some data with unsorted streams
        String[] data = new String[] { "a", "bbbbb", "ccc", "dd", "eeee" };
        Block[] blocks = new Block[data.length];
        int entries = 65536;
        BlockBuilder blockBuilder = VARCHAR.createBlockBuilder(null, entries);
        for (int i = 0; i < data.length; i++) {
            byte[] bytes = data[i].getBytes();
            for (int j = 0; j < entries; j++) {
                // force to write different data
                bytes[0] = (byte) ((bytes[0] + 1) % 128);
                blockBuilder.writeBytes(Slices.wrappedBuffer(bytes, 0, bytes.length), 0, bytes.length);
                blockBuilder.closeEntry();
            }
            blocks[i] = blockBuilder.build();
            blockBuilder = blockBuilder.newBlockBuilderLike(null);
        }
        writer.write(new Page(blocks));
        writer.close();
        // read the footer and verify the streams are ordered by size
        DataSize dataSize = new DataSize(1, MEGABYTE);
        OrcDataSource orcDataSource = new FileOrcDataSource(tempFile.getFile(), dataSize, dataSize, dataSize, true, tempFile.getFile().lastModified());
        Footer footer = new OrcReader(orcDataSource, dataSize, dataSize, dataSize).getFooter();
        for (StripeInformation stripe : footer.getStripes()) {
            // read the footer
            Slice tailBuffer = orcDataSource.readFully(stripe.getOffset() + stripe.getIndexLength() + stripe.getDataLength(), toIntExact(stripe.getFooterLength()));
            try (InputStream inputStream = new OrcInputStream(OrcChunkLoader.create(orcDataSource.getId(), tailBuffer, Optional.empty(), newSimpleAggregatedMemoryContext()))) {
                StripeFooter stripeFooter = new OrcMetadataReader().readStripeFooter(footer.getTypes(), inputStream, ZoneId.of("UTC"));
                int size = 0;
                boolean dataStreamStarted = false;
                for (Stream stream : stripeFooter.getStreams()) {
                    if (isIndexStream(stream)) {
                        assertFalse(dataStreamStarted);
                        continue;
                    }
                    dataStreamStarted = true;
                    // verify sizes in order
                    assertGreaterThanOrEqual(stream.getLength(), size);
                    size = stream.getLength();
                }
            }
        }
    }
}