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Example 1 with ObjectIterator

use of it.unimi.dsi.fastutil.objects.ObjectIterator in project elki by elki-project.

the class ArffParser method loadSparseInstance.

private Object[] loadSparseInstance(StreamTokenizer tokenizer, int[] targ, int[] dimsize, TypeInformation[] elkitypes, int metaLength) throws IOException {
    Int2ObjectOpenHashMap<Object> map = new Int2ObjectOpenHashMap<>();
    while (true) {
        nextToken(tokenizer);
        assert (tokenizer.ttype != StreamTokenizer.TT_EOF && tokenizer.ttype != StreamTokenizer.TT_EOL);
        if (tokenizer.ttype == '}') {
            nextToken(tokenizer);
            assert (tokenizer.ttype == StreamTokenizer.TT_EOF || tokenizer.ttype == StreamTokenizer.TT_EOL);
            break;
        } else {
            // sparse token
            if (tokenizer.ttype != StreamTokenizer.TT_WORD) {
                throw new AbortException("Unexpected token type encountered: " + tokenizer.toString() + " type: " + tokenizer.ttype);
            }
            int dim = ParseUtil.parseIntBase10(tokenizer.sval);
            if (map.containsKey(dim)) {
                throw new AbortException("Duplicate key in sparse vector: " + tokenizer.toString());
            }
            nextToken(tokenizer);
            if (tokenizer.ttype == StreamTokenizer.TT_WORD) {
                map.put(dim, // 
                TypeUtil.NUMBER_VECTOR_FIELD.equals(elkitypes[targ[dim]]) ? (Double) ParseUtil.parseDouble(tokenizer.sval) : tokenizer.sval);
            } else {
                throw new AbortException("Unexpected token type encountered: " + tokenizer.toString());
            }
        }
    }
    Object[] data = new Object[metaLength];
    for (int out = 0; out < metaLength; out++) {
        // Find the first index
        int s = -1;
        for (int i = 0; i < targ.length; i++) {
            if (targ[i] == out && s < 0) {
                s = i;
                break;
            }
        }
        assert (s >= 0);
        if (TypeUtil.NUMBER_VECTOR_FIELD.equals(elkitypes[out])) {
            Int2DoubleOpenHashMap f = new Int2DoubleOpenHashMap(dimsize[out]);
            for (ObjectIterator<Int2ObjectMap.Entry<Object>> iter = map.int2ObjectEntrySet().fastIterator(); iter.hasNext(); ) {
                Int2ObjectMap.Entry<Object> entry = iter.next();
                int i = entry.getIntKey();
                if (i < s || i >= s + dimsize[out]) {
                    continue;
                }
                double v = ((Double) entry.getValue()).doubleValue();
                f.put(i - s, v);
            }
            data[out] = new SparseDoubleVector(f, dimsize[out]);
        } else if (TypeUtil.LABELLIST.equals(elkitypes[out])) {
            // Build a label list out of successive labels
            labels.clear();
            for (ObjectIterator<Int2ObjectMap.Entry<Object>> iter = map.int2ObjectEntrySet().fastIterator(); iter.hasNext(); ) {
                Int2ObjectMap.Entry<Object> entry = iter.next();
                int i = entry.getIntKey();
                if (i < s) {
                    continue;
                }
                if (i >= s + dimsize[out]) {
                    break;
                }
                if (labels.size() < i - s) {
                    LOG.warning("Sparse consecutive labels are currently not correctly supported.");
                }
                labels.add((String) entry.getValue());
            }
            data[out] = LabelList.make(labels);
        } else if (TypeUtil.EXTERNALID.equals(elkitypes[out])) {
            String val = (String) map.get(s);
            if (val == null) {
                throw new AbortException("External ID column not set in sparse instance." + tokenizer.toString());
            }
            data[out] = new ExternalID(val);
        } else if (TypeUtil.CLASSLABEL.equals(elkitypes[out])) {
            Object val = map.get(s);
            if (val == null) {
                throw new AbortException("Class label column not set in sparse instance." + tokenizer.toString());
            }
            // TODO: support other class label types.
            ClassLabel lbl = new SimpleClassLabel(String.valueOf(val));
            data[out] = lbl;
        } else {
            throw new AbortException("Unsupported type for column " + "->" + out + ": " + ((elkitypes[out] != null) ? elkitypes[out].toString() : "null"));
        }
    }
    return data;
}
Also used : Int2ObjectOpenHashMap(it.unimi.dsi.fastutil.ints.Int2ObjectOpenHashMap) ExternalID(de.lmu.ifi.dbs.elki.data.ExternalID) Int2ObjectMap(it.unimi.dsi.fastutil.ints.Int2ObjectMap) SimpleClassLabel(de.lmu.ifi.dbs.elki.data.SimpleClassLabel) SparseDoubleVector(de.lmu.ifi.dbs.elki.data.SparseDoubleVector) ObjectIterator(it.unimi.dsi.fastutil.objects.ObjectIterator) SimpleClassLabel(de.lmu.ifi.dbs.elki.data.SimpleClassLabel) ClassLabel(de.lmu.ifi.dbs.elki.data.ClassLabel) Int2DoubleOpenHashMap(it.unimi.dsi.fastutil.ints.Int2DoubleOpenHashMap) AbortException(de.lmu.ifi.dbs.elki.utilities.exceptions.AbortException)

Example 2 with ObjectIterator

use of it.unimi.dsi.fastutil.objects.ObjectIterator in project angel by Tencent.

the class MixedBinaryInZAExecutor method apply.

private static Vector apply(CompLongLongVector v1, LongIntVector v2, Binary op) {
    LongLongVector[] parts = v1.getPartitions();
    Storage[] resParts = StorageSwitch.applyComp(v1, v2, op);
    if (v2.isSparse()) {
        ObjectIterator<Long2IntMap.Entry> iter = v2.getStorage().entryIterator();
        if (v1.size() > v2.size()) {
            long subDim = (v1.getDim() + v1.getNumPartitions() - 1) / v1.getNumPartitions();
            while (iter.hasNext()) {
                Long2IntMap.Entry entry = iter.next();
                long idx = entry.getLongKey();
                int pidx = (int) (idx / subDim);
                long subidx = idx % subDim;
                if (parts[pidx].hasKey(subidx)) {
                    ((LongLongVectorStorage) resParts[pidx]).set(subidx, op.apply(parts[pidx].get(subidx), entry.getIntValue()));
                }
            }
        } else {
            long base = 0;
            for (int i = 0; i < parts.length; i++) {
                LongLongVector part = parts[i];
                LongLongVectorStorage resPart = (LongLongVectorStorage) resParts[i];
                if (part.isDense()) {
                    long[] partValues = part.getStorage().getValues();
                    long[] resPartValues = resPart.getValues();
                    for (int j = 0; j < partValues.length; j++) {
                        if (v2.hasKey(j + base)) {
                            resPartValues[j] = op.apply(partValues[j], v2.get(j + base));
                        }
                    }
                } else if (part.isSparse()) {
                    ObjectIterator<Long2LongMap.Entry> piter = part.getStorage().entryIterator();
                    while (piter.hasNext()) {
                        Long2LongMap.Entry entry = piter.next();
                        long idx = entry.getLongKey();
                        if (v2.hasKey(idx + base)) {
                            resPart.set(idx, op.apply(entry.getLongValue(), v2.get(idx + base)));
                        }
                    }
                } else {
                    // sorted
                    if (op.isKeepStorage()) {
                        long[] partIndices = part.getStorage().getIndices();
                        long[] partValues = part.getStorage().getValues();
                        long[] resPartIndices = resPart.getIndices();
                        long[] resPartValues = resPart.getValues();
                        for (int j = 0; j < partIndices.length; j++) {
                            long idx = partIndices[j];
                            if (v2.hasKey(idx + base)) {
                                resPartIndices[j] = idx;
                                resPartValues[j] = op.apply(partValues[j], v2.get(idx + base));
                            }
                        }
                    } else {
                        long[] partIndices = part.getStorage().getIndices();
                        long[] partValues = part.getStorage().getValues();
                        for (int j = 0; j < partIndices.length; j++) {
                            long idx = partIndices[j];
                            if (v2.hasKey(idx + base)) {
                                resPart.set(idx, op.apply(partValues[j], v2.get(idx + base)));
                            }
                        }
                    }
                }
                base += part.getDim();
            }
        }
    } else {
        // sorted
        if (v1.size() > v2.size()) {
            long subDim = (v1.getDim() + v1.getNumPartitions() - 1) / v1.getNumPartitions();
            long[] v2Indices = v2.getStorage().getIndices();
            int[] v2Values = v2.getStorage().getValues();
            for (int i = 0; i < v2Indices.length; i++) {
                long idx = v2Indices[i];
                int pidx = (int) (idx / subDim);
                long subidx = idx % subDim;
                if (parts[pidx].hasKey(subidx)) {
                    ((LongLongVectorStorage) resParts[pidx]).set(subidx, op.apply(parts[pidx].get(subidx), v2Values[i]));
                }
            }
        } else {
            long base = 0;
            for (int i = 0; i < parts.length; i++) {
                LongLongVector part = parts[i];
                LongLongVectorStorage resPart = (LongLongVectorStorage) resParts[i];
                if (part.isDense()) {
                    long[] partValues = part.getStorage().getValues();
                    long[] resPartValues = resPart.getValues();
                    for (int j = 0; j < partValues.length; j++) {
                        if (v2.hasKey(j + base)) {
                            resPartValues[j] = op.apply(partValues[j], v2.get(j + base));
                        }
                    }
                } else if (part.isSparse()) {
                    ObjectIterator<Long2LongMap.Entry> piter = part.getStorage().entryIterator();
                    while (piter.hasNext()) {
                        Long2LongMap.Entry entry = piter.next();
                        long idx = entry.getLongKey();
                        if (v2.hasKey(idx + base)) {
                            resPart.set(idx, op.apply(entry.getLongValue(), v2.get(idx + base)));
                        }
                    }
                } else {
                    // sorted
                    if (op.isKeepStorage()) {
                        long[] partIndices = part.getStorage().getIndices();
                        long[] partValues = part.getStorage().getValues();
                        long[] resPartIndices = resPart.getIndices();
                        long[] resPartValues = resPart.getValues();
                        for (int j = 0; j < partIndices.length; j++) {
                            long idx = partIndices[j];
                            if (v2.hasKey(idx + base)) {
                                resPartIndices[j] = idx;
                                resPartValues[j] = op.apply(partValues[j], v2.get(idx + base));
                            }
                        }
                    } else {
                        long[] partIndices = part.getStorage().getIndices();
                        long[] partValues = part.getStorage().getValues();
                        for (int j = 0; j < partIndices.length; j++) {
                            long idx = partIndices[j];
                            if (v2.hasKey(idx + base)) {
                                resPart.set(idx, op.apply(partValues[j], v2.get(idx + base)));
                            }
                        }
                    }
                }
                base += part.getDim();
            }
        }
    }
    LongLongVector[] res = new LongLongVector[parts.length];
    int i = 0;
    for (LongLongVector part : parts) {
        res[i] = new LongLongVector(part.getMatrixId(), part.getRowId(), part.getClock(), part.getDim(), (LongLongVectorStorage) resParts[i]);
        i++;
    }
    v1.setPartitions(res);
    return v1;
}
Also used : CompLongLongVector(com.tencent.angel.ml.math2.vector.CompLongLongVector) LongLongVector(com.tencent.angel.ml.math2.vector.LongLongVector) Long2IntMap(it.unimi.dsi.fastutil.longs.Long2IntMap) ObjectIterator(it.unimi.dsi.fastutil.objects.ObjectIterator) Long2LongMap(it.unimi.dsi.fastutil.longs.Long2LongMap) IntIntVectorStorage(com.tencent.angel.ml.math2.storage.IntIntVectorStorage) Storage(com.tencent.angel.ml.math2.storage.Storage) LongIntVectorStorage(com.tencent.angel.ml.math2.storage.LongIntVectorStorage) IntFloatVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatVectorStorage) LongDoubleVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleVectorStorage) IntDoubleVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleVectorStorage) LongLongVectorStorage(com.tencent.angel.ml.math2.storage.LongLongVectorStorage) LongFloatVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatVectorStorage) IntLongVectorStorage(com.tencent.angel.ml.math2.storage.IntLongVectorStorage) LongLongVectorStorage(com.tencent.angel.ml.math2.storage.LongLongVectorStorage)

Example 3 with ObjectIterator

use of it.unimi.dsi.fastutil.objects.ObjectIterator in project angel by Tencent.

the class MixedBinaryOutNonZAExecutor method apply.

private static Vector apply(CompIntDoubleVector v1, IntIntVector v2, Binary op) {
    IntDoubleVector[] parts = v1.getPartitions();
    Storage[] resParts = StorageSwitch.applyComp(v1, v2, op);
    if (v2.isDense()) {
        int[] v2Values = v2.getStorage().getValues();
        int base = 0, k = 0;
        for (IntDoubleVector part : parts) {
            IntDoubleVectorStorage resPart = (IntDoubleVectorStorage) resParts[k];
            double[] newValues = resPart.getValues();
            if (part.isDense()) {
                double[] partValue = part.getStorage().getValues();
                for (int i = 0; i < partValue.length; i++) {
                    int idx = i + base;
                    newValues[i] = op.apply(partValue[i], v2Values[idx]);
                }
            } else if (part.isSparse()) {
                if (part.size() < Constant.denseLoopThreshold * part.getDim()) {
                    for (int i = 0; i < part.getDim(); i++) {
                        resPart.set(i, op.apply(0, v2Values[i + base]));
                    }
                    ObjectIterator<Int2DoubleMap.Entry> iter = part.getStorage().entryIterator();
                    while (iter.hasNext()) {
                        Int2DoubleMap.Entry entry = iter.next();
                        int idx = entry.getIntKey();
                        resPart.set(idx, op.apply(entry.getDoubleValue(), v2Values[idx + base]));
                    }
                } else {
                    for (int i = 0; i < newValues.length; i++) {
                        if (part.getStorage().hasKey(i)) {
                            resPart.set(i, op.apply(part.get(i), v2Values[i + base]));
                        } else {
                            resPart.set(i, op.apply(0, v2Values[i + base]));
                        }
                    }
                }
            } else {
                // sorted
                if (op.isKeepStorage()) {
                    int dim = part.getDim();
                    int[] resIndices = resPart.getIndices();
                    double[] resValues = resPart.getValues();
                    int[] partIndices = part.getStorage().getIndices();
                    double[] partValues = part.getStorage().getValues();
                    for (int i = 0; i < dim; i++) {
                        resIndices[i] = i;
                        resValues[i] = op.apply(0, v2Values[i + base]);
                    }
                    int size = part.size();
                    for (int i = 0; i < size; i++) {
                        int idx = partIndices[i];
                        resValues[idx] = op.apply(partValues[i], v2Values[idx + base]);
                    }
                } else {
                    if (part.size() < Constant.denseLoopThreshold * part.getDim()) {
                        int[] partIndices = part.getStorage().getIndices();
                        double[] partValues = part.getStorage().getValues();
                        for (int i = 0; i < part.getDim(); i++) {
                            newValues[i] = op.apply(0, v2Values[i + base]);
                        }
                        int size = part.size();
                        for (int i = 0; i < size; i++) {
                            int idx = partIndices[i];
                            newValues[idx] = op.apply(partValues[i], v2Values[idx + base]);
                        }
                    } else {
                        IntDoubleVectorStorage partStorage = part.getStorage();
                        for (int i = 0; i < newValues.length; i++) {
                            if (partStorage.hasKey(i)) {
                                newValues[i] = op.apply(partStorage.get(i), v2Values[i + base]);
                            } else {
                                newValues[i] = op.apply(0, v2Values[i + base]);
                            }
                        }
                    }
                }
            }
            base += part.getDim();
            k++;
        }
    } else {
        if (v2.isSparse()) {
            if (!op.isKeepStorage()) {
                for (int i = 0; i < parts.length; i++) {
                    if (parts[i].getStorage() instanceof IntDoubleSortedVectorStorage) {
                        resParts[i] = new IntDoubleSparseVectorStorage(parts[i].getDim(), parts[i].getStorage().getIndices(), parts[i].getStorage().getValues());
                    }
                }
            }
            int subDim = (v1.getDim() + v1.getNumPartitions() - 1) / v1.getNumPartitions();
            ObjectIterator<Int2IntMap.Entry> iter = v2.getStorage().entryIterator();
            while (iter.hasNext()) {
                Int2IntMap.Entry entry = iter.next();
                int gidx = entry.getIntKey();
                int pidx = (int) (gidx / subDim);
                int subidx = gidx % subDim;
                ((IntDoubleVectorStorage) resParts[pidx]).set(subidx, op.apply(parts[pidx].get(subidx), entry.getIntValue()));
            }
        } else {
            // sorted
            if (!op.isKeepStorage()) {
                for (int i = 0; i < parts.length; i++) {
                    if (parts[i].getStorage() instanceof IntDoubleSortedVectorStorage) {
                        resParts[i] = new IntDoubleSparseVectorStorage(parts[i].getDim(), parts[i].getStorage().getIndices(), parts[i].getStorage().getValues());
                    }
                }
            }
            int subDim = (v1.getDim() + v1.getNumPartitions() - 1) / v1.getNumPartitions();
            int[] v2Indices = v2.getStorage().getIndices();
            int[] v2Values = v2.getStorage().getValues();
            for (int i = 0; i < v2Indices.length; i++) {
                int gidx = v2Indices[i];
                int pidx = (int) (gidx / subDim);
                int subidx = gidx % subDim;
                ((IntDoubleVectorStorage) resParts[pidx]).set(subidx, op.apply(parts[pidx].get(subidx), v2Values[i]));
            }
        }
    }
    IntDoubleVector[] res = new IntDoubleVector[parts.length];
    int i = 0;
    for (IntDoubleVector part : parts) {
        res[i] = new IntDoubleVector(part.getMatrixId(), part.getRowId(), part.getClock(), part.getDim(), (IntDoubleVectorStorage) resParts[i]);
        i++;
    }
    return new CompIntDoubleVector(v1.getMatrixId(), v1.getRowId(), v1.getClock(), v1.getDim(), res, v1.getSubDim());
}
Also used : Int2DoubleMap(it.unimi.dsi.fastutil.ints.Int2DoubleMap) CompIntDoubleVector(com.tencent.angel.ml.math2.vector.CompIntDoubleVector) IntDoubleVector(com.tencent.angel.ml.math2.vector.IntDoubleVector) ObjectIterator(it.unimi.dsi.fastutil.objects.ObjectIterator) IntDoubleSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleSparseVectorStorage) IntIntVectorStorage(com.tencent.angel.ml.math2.storage.IntIntVectorStorage) Storage(com.tencent.angel.ml.math2.storage.Storage) IntDoubleSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleSparseVectorStorage) LongIntVectorStorage(com.tencent.angel.ml.math2.storage.LongIntVectorStorage) LongLongSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongLongSparseVectorStorage) IntDoubleSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleSortedVectorStorage) LongDoubleSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleSparseVectorStorage) LongDoubleSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleSortedVectorStorage) LongLongVectorStorage(com.tencent.angel.ml.math2.storage.LongLongVectorStorage) LongFloatVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatVectorStorage) IntLongVectorStorage(com.tencent.angel.ml.math2.storage.IntLongVectorStorage) IntIntSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntIntSortedVectorStorage) LongIntSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongIntSortedVectorStorage) IntLongSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntLongSortedVectorStorage) IntLongSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntLongSparseVectorStorage) LongIntSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongIntSparseVectorStorage) IntFloatVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatVectorStorage) IntFloatSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSortedVectorStorage) LongLongSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongLongSortedVectorStorage) LongDoubleVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleVectorStorage) IntDoubleVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleVectorStorage) IntIntSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntIntSparseVectorStorage) IntFloatSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSparseVectorStorage) LongFloatSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatSparseVectorStorage) LongFloatSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatSortedVectorStorage) IntDoubleVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleVectorStorage) IntDoubleSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleSortedVectorStorage) CompIntDoubleVector(com.tencent.angel.ml.math2.vector.CompIntDoubleVector) Int2IntMap(it.unimi.dsi.fastutil.ints.Int2IntMap)

Example 4 with ObjectIterator

use of it.unimi.dsi.fastutil.objects.ObjectIterator in project angel by Tencent.

the class MixedBinaryOutNonZAExecutor method apply.

private static Vector apply(CompIntFloatVector v1, IntFloatVector v2, Binary op) {
    IntFloatVector[] parts = v1.getPartitions();
    Storage[] resParts = StorageSwitch.applyComp(v1, v2, op);
    if (v2.isDense()) {
        float[] v2Values = v2.getStorage().getValues();
        int base = 0, k = 0;
        for (IntFloatVector part : parts) {
            IntFloatVectorStorage resPart = (IntFloatVectorStorage) resParts[k];
            float[] newValues = resPart.getValues();
            if (part.isDense()) {
                float[] partValue = part.getStorage().getValues();
                for (int i = 0; i < partValue.length; i++) {
                    int idx = i + base;
                    newValues[i] = op.apply(partValue[i], v2Values[idx]);
                }
            } else if (part.isSparse()) {
                if (part.size() < Constant.denseLoopThreshold * part.getDim()) {
                    for (int i = 0; i < part.getDim(); i++) {
                        resPart.set(i, op.apply(0, v2Values[i + base]));
                    }
                    ObjectIterator<Int2FloatMap.Entry> iter = part.getStorage().entryIterator();
                    while (iter.hasNext()) {
                        Int2FloatMap.Entry entry = iter.next();
                        int idx = entry.getIntKey();
                        resPart.set(idx, op.apply(entry.getFloatValue(), v2Values[idx + base]));
                    }
                } else {
                    for (int i = 0; i < newValues.length; i++) {
                        if (part.getStorage().hasKey(i)) {
                            resPart.set(i, op.apply(part.get(i), v2Values[i + base]));
                        } else {
                            resPart.set(i, op.apply(0, v2Values[i + base]));
                        }
                    }
                }
            } else {
                // sorted
                if (op.isKeepStorage()) {
                    int dim = part.getDim();
                    int[] resIndices = resPart.getIndices();
                    float[] resValues = resPart.getValues();
                    int[] partIndices = part.getStorage().getIndices();
                    float[] partValues = part.getStorage().getValues();
                    for (int i = 0; i < dim; i++) {
                        resIndices[i] = i;
                        resValues[i] = op.apply(0, v2Values[i + base]);
                    }
                    int size = part.size();
                    for (int i = 0; i < size; i++) {
                        int idx = partIndices[i];
                        resValues[idx] = op.apply(partValues[i], v2Values[idx + base]);
                    }
                } else {
                    if (part.size() < Constant.denseLoopThreshold * part.getDim()) {
                        int[] partIndices = part.getStorage().getIndices();
                        float[] partValues = part.getStorage().getValues();
                        for (int i = 0; i < part.getDim(); i++) {
                            newValues[i] = op.apply(0, v2Values[i + base]);
                        }
                        int size = part.size();
                        for (int i = 0; i < size; i++) {
                            int idx = partIndices[i];
                            newValues[idx] = op.apply(partValues[i], v2Values[idx + base]);
                        }
                    } else {
                        IntFloatVectorStorage partStorage = part.getStorage();
                        for (int i = 0; i < newValues.length; i++) {
                            if (partStorage.hasKey(i)) {
                                newValues[i] = op.apply(partStorage.get(i), v2Values[i + base]);
                            } else {
                                newValues[i] = op.apply(0, v2Values[i + base]);
                            }
                        }
                    }
                }
            }
            base += part.getDim();
            k++;
        }
    } else {
        if (v2.isSparse()) {
            if (!op.isKeepStorage()) {
                for (int i = 0; i < parts.length; i++) {
                    if (parts[i].getStorage() instanceof IntFloatSortedVectorStorage) {
                        resParts[i] = new IntFloatSparseVectorStorage(parts[i].getDim(), parts[i].getStorage().getIndices(), parts[i].getStorage().getValues());
                    }
                }
            }
            int subDim = (v1.getDim() + v1.getNumPartitions() - 1) / v1.getNumPartitions();
            ObjectIterator<Int2FloatMap.Entry> iter = v2.getStorage().entryIterator();
            while (iter.hasNext()) {
                Int2FloatMap.Entry entry = iter.next();
                int gidx = entry.getIntKey();
                int pidx = (int) (gidx / subDim);
                int subidx = gidx % subDim;
                ((IntFloatVectorStorage) resParts[pidx]).set(subidx, op.apply(parts[pidx].get(subidx), entry.getFloatValue()));
            }
        } else {
            // sorted
            if (!op.isKeepStorage()) {
                for (int i = 0; i < parts.length; i++) {
                    if (parts[i].getStorage() instanceof IntFloatSortedVectorStorage) {
                        resParts[i] = new IntFloatSparseVectorStorage(parts[i].getDim(), parts[i].getStorage().getIndices(), parts[i].getStorage().getValues());
                    }
                }
            }
            int subDim = (v1.getDim() + v1.getNumPartitions() - 1) / v1.getNumPartitions();
            int[] v2Indices = v2.getStorage().getIndices();
            float[] v2Values = v2.getStorage().getValues();
            for (int i = 0; i < v2Indices.length; i++) {
                int gidx = v2Indices[i];
                int pidx = (int) (gidx / subDim);
                int subidx = gidx % subDim;
                ((IntFloatVectorStorage) resParts[pidx]).set(subidx, op.apply(parts[pidx].get(subidx), v2Values[i]));
            }
        }
    }
    IntFloatVector[] res = new IntFloatVector[parts.length];
    int i = 0;
    for (IntFloatVector part : parts) {
        res[i] = new IntFloatVector(part.getMatrixId(), part.getRowId(), part.getClock(), part.getDim(), (IntFloatVectorStorage) resParts[i]);
        i++;
    }
    return new CompIntFloatVector(v1.getMatrixId(), v1.getRowId(), v1.getClock(), v1.getDim(), res, v1.getSubDim());
}
Also used : IntFloatSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSparseVectorStorage) CompIntFloatVector(com.tencent.angel.ml.math2.vector.CompIntFloatVector) IntFloatVector(com.tencent.angel.ml.math2.vector.IntFloatVector) ObjectIterator(it.unimi.dsi.fastutil.objects.ObjectIterator) IntFloatSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSortedVectorStorage) CompIntFloatVector(com.tencent.angel.ml.math2.vector.CompIntFloatVector) IntFloatVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatVectorStorage) IntIntVectorStorage(com.tencent.angel.ml.math2.storage.IntIntVectorStorage) Storage(com.tencent.angel.ml.math2.storage.Storage) IntDoubleSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleSparseVectorStorage) LongIntVectorStorage(com.tencent.angel.ml.math2.storage.LongIntVectorStorage) LongLongSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongLongSparseVectorStorage) IntDoubleSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleSortedVectorStorage) LongDoubleSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleSparseVectorStorage) LongDoubleSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleSortedVectorStorage) LongLongVectorStorage(com.tencent.angel.ml.math2.storage.LongLongVectorStorage) LongFloatVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatVectorStorage) IntLongVectorStorage(com.tencent.angel.ml.math2.storage.IntLongVectorStorage) IntIntSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntIntSortedVectorStorage) LongIntSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongIntSortedVectorStorage) IntLongSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntLongSortedVectorStorage) IntLongSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntLongSparseVectorStorage) LongIntSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongIntSparseVectorStorage) IntFloatVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatVectorStorage) IntFloatSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSortedVectorStorage) LongLongSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongLongSortedVectorStorage) LongDoubleVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleVectorStorage) IntDoubleVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleVectorStorage) IntIntSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntIntSparseVectorStorage) IntFloatSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSparseVectorStorage) LongFloatSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatSparseVectorStorage) LongFloatSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatSortedVectorStorage) Int2FloatMap(it.unimi.dsi.fastutil.ints.Int2FloatMap)

Example 5 with ObjectIterator

use of it.unimi.dsi.fastutil.objects.ObjectIterator in project angel by Tencent.

the class MixedBinaryOutNonZAExecutor method apply.

private static Vector apply(CompIntFloatVector v1, IntIntVector v2, Binary op) {
    IntFloatVector[] parts = v1.getPartitions();
    Storage[] resParts = StorageSwitch.applyComp(v1, v2, op);
    if (v2.isDense()) {
        int[] v2Values = v2.getStorage().getValues();
        int base = 0, k = 0;
        for (IntFloatVector part : parts) {
            IntFloatVectorStorage resPart = (IntFloatVectorStorage) resParts[k];
            float[] newValues = resPart.getValues();
            if (part.isDense()) {
                float[] partValue = part.getStorage().getValues();
                for (int i = 0; i < partValue.length; i++) {
                    int idx = i + base;
                    newValues[i] = op.apply(partValue[i], v2Values[idx]);
                }
            } else if (part.isSparse()) {
                if (part.size() < Constant.denseLoopThreshold * part.getDim()) {
                    for (int i = 0; i < part.getDim(); i++) {
                        resPart.set(i, op.apply(0, v2Values[i + base]));
                    }
                    ObjectIterator<Int2FloatMap.Entry> iter = part.getStorage().entryIterator();
                    while (iter.hasNext()) {
                        Int2FloatMap.Entry entry = iter.next();
                        int idx = entry.getIntKey();
                        resPart.set(idx, op.apply(entry.getFloatValue(), v2Values[idx + base]));
                    }
                } else {
                    for (int i = 0; i < newValues.length; i++) {
                        if (part.getStorage().hasKey(i)) {
                            resPart.set(i, op.apply(part.get(i), v2Values[i + base]));
                        } else {
                            resPart.set(i, op.apply(0, v2Values[i + base]));
                        }
                    }
                }
            } else {
                // sorted
                if (op.isKeepStorage()) {
                    int dim = part.getDim();
                    int[] resIndices = resPart.getIndices();
                    float[] resValues = resPart.getValues();
                    int[] partIndices = part.getStorage().getIndices();
                    float[] partValues = part.getStorage().getValues();
                    for (int i = 0; i < dim; i++) {
                        resIndices[i] = i;
                        resValues[i] = op.apply(0, v2Values[i + base]);
                    }
                    int size = part.size();
                    for (int i = 0; i < size; i++) {
                        int idx = partIndices[i];
                        resValues[idx] = op.apply(partValues[i], v2Values[idx + base]);
                    }
                } else {
                    if (part.size() < Constant.denseLoopThreshold * part.getDim()) {
                        int[] partIndices = part.getStorage().getIndices();
                        float[] partValues = part.getStorage().getValues();
                        for (int i = 0; i < part.getDim(); i++) {
                            newValues[i] = op.apply(0, v2Values[i + base]);
                        }
                        int size = part.size();
                        for (int i = 0; i < size; i++) {
                            int idx = partIndices[i];
                            newValues[idx] = op.apply(partValues[i], v2Values[idx + base]);
                        }
                    } else {
                        IntFloatVectorStorage partStorage = part.getStorage();
                        for (int i = 0; i < newValues.length; i++) {
                            if (partStorage.hasKey(i)) {
                                newValues[i] = op.apply(partStorage.get(i), v2Values[i + base]);
                            } else {
                                newValues[i] = op.apply(0, v2Values[i + base]);
                            }
                        }
                    }
                }
            }
            base += part.getDim();
            k++;
        }
    } else {
        if (v2.isSparse()) {
            if (!op.isKeepStorage()) {
                for (int i = 0; i < parts.length; i++) {
                    if (parts[i].getStorage() instanceof IntFloatSortedVectorStorage) {
                        resParts[i] = new IntFloatSparseVectorStorage(parts[i].getDim(), parts[i].getStorage().getIndices(), parts[i].getStorage().getValues());
                    }
                }
            }
            int subDim = (v1.getDim() + v1.getNumPartitions() - 1) / v1.getNumPartitions();
            ObjectIterator<Int2IntMap.Entry> iter = v2.getStorage().entryIterator();
            while (iter.hasNext()) {
                Int2IntMap.Entry entry = iter.next();
                int gidx = entry.getIntKey();
                int pidx = (int) (gidx / subDim);
                int subidx = gidx % subDim;
                ((IntFloatVectorStorage) resParts[pidx]).set(subidx, op.apply(parts[pidx].get(subidx), entry.getIntValue()));
            }
        } else {
            // sorted
            if (!op.isKeepStorage()) {
                for (int i = 0; i < parts.length; i++) {
                    if (parts[i].getStorage() instanceof IntFloatSortedVectorStorage) {
                        resParts[i] = new IntFloatSparseVectorStorage(parts[i].getDim(), parts[i].getStorage().getIndices(), parts[i].getStorage().getValues());
                    }
                }
            }
            int subDim = (v1.getDim() + v1.getNumPartitions() - 1) / v1.getNumPartitions();
            int[] v2Indices = v2.getStorage().getIndices();
            int[] v2Values = v2.getStorage().getValues();
            for (int i = 0; i < v2Indices.length; i++) {
                int gidx = v2Indices[i];
                int pidx = (int) (gidx / subDim);
                int subidx = gidx % subDim;
                ((IntFloatVectorStorage) resParts[pidx]).set(subidx, op.apply(parts[pidx].get(subidx), v2Values[i]));
            }
        }
    }
    IntFloatVector[] res = new IntFloatVector[parts.length];
    int i = 0;
    for (IntFloatVector part : parts) {
        res[i] = new IntFloatVector(part.getMatrixId(), part.getRowId(), part.getClock(), part.getDim(), (IntFloatVectorStorage) resParts[i]);
        i++;
    }
    return new CompIntFloatVector(v1.getMatrixId(), v1.getRowId(), v1.getClock(), v1.getDim(), res, v1.getSubDim());
}
Also used : IntFloatSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSparseVectorStorage) CompIntFloatVector(com.tencent.angel.ml.math2.vector.CompIntFloatVector) IntFloatVector(com.tencent.angel.ml.math2.vector.IntFloatVector) ObjectIterator(it.unimi.dsi.fastutil.objects.ObjectIterator) IntFloatSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSortedVectorStorage) CompIntFloatVector(com.tencent.angel.ml.math2.vector.CompIntFloatVector) IntFloatVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatVectorStorage) IntIntVectorStorage(com.tencent.angel.ml.math2.storage.IntIntVectorStorage) Storage(com.tencent.angel.ml.math2.storage.Storage) IntDoubleSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleSparseVectorStorage) LongIntVectorStorage(com.tencent.angel.ml.math2.storage.LongIntVectorStorage) LongLongSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongLongSparseVectorStorage) IntDoubleSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleSortedVectorStorage) LongDoubleSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleSparseVectorStorage) LongDoubleSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleSortedVectorStorage) LongLongVectorStorage(com.tencent.angel.ml.math2.storage.LongLongVectorStorage) LongFloatVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatVectorStorage) IntLongVectorStorage(com.tencent.angel.ml.math2.storage.IntLongVectorStorage) IntIntSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntIntSortedVectorStorage) LongIntSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongIntSortedVectorStorage) IntLongSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntLongSortedVectorStorage) IntLongSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntLongSparseVectorStorage) LongIntSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongIntSparseVectorStorage) IntFloatVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatVectorStorage) IntFloatSortedVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSortedVectorStorage) LongLongSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongLongSortedVectorStorage) LongDoubleVectorStorage(com.tencent.angel.ml.math2.storage.LongDoubleVectorStorage) IntDoubleVectorStorage(com.tencent.angel.ml.math2.storage.IntDoubleVectorStorage) IntIntSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntIntSparseVectorStorage) IntFloatSparseVectorStorage(com.tencent.angel.ml.math2.storage.IntFloatSparseVectorStorage) LongFloatSparseVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatSparseVectorStorage) LongFloatSortedVectorStorage(com.tencent.angel.ml.math2.storage.LongFloatSortedVectorStorage) Int2FloatMap(it.unimi.dsi.fastutil.ints.Int2FloatMap) Int2IntMap(it.unimi.dsi.fastutil.ints.Int2IntMap)

Aggregations

ObjectIterator (it.unimi.dsi.fastutil.objects.ObjectIterator)254 IntDoubleVectorStorage (com.tencent.angel.ml.math2.storage.IntDoubleVectorStorage)115 IntFloatVectorStorage (com.tencent.angel.ml.math2.storage.IntFloatVectorStorage)114 IntLongVectorStorage (com.tencent.angel.ml.math2.storage.IntLongVectorStorage)111 IntIntVectorStorage (com.tencent.angel.ml.math2.storage.IntIntVectorStorage)110 AngelException (com.tencent.angel.exception.AngelException)100 LongDoubleVectorStorage (com.tencent.angel.ml.math2.storage.LongDoubleVectorStorage)100 LongFloatVectorStorage (com.tencent.angel.ml.math2.storage.LongFloatVectorStorage)99 LongLongVectorStorage (com.tencent.angel.ml.math2.storage.LongLongVectorStorage)98 LongIntVectorStorage (com.tencent.angel.ml.math2.storage.LongIntVectorStorage)97 Storage (com.tencent.angel.ml.math2.storage.Storage)96 Int2FloatMap (it.unimi.dsi.fastutil.ints.Int2FloatMap)62 Int2LongMap (it.unimi.dsi.fastutil.ints.Int2LongMap)57 Int2DoubleMap (it.unimi.dsi.fastutil.ints.Int2DoubleMap)56 Int2IntMap (it.unimi.dsi.fastutil.ints.Int2IntMap)55 IntDoubleVector (com.tencent.angel.ml.math2.vector.IntDoubleVector)47 IntDoubleSortedVectorStorage (com.tencent.angel.ml.math2.storage.IntDoubleSortedVectorStorage)44 LongDoubleSortedVectorStorage (com.tencent.angel.ml.math2.storage.LongDoubleSortedVectorStorage)44 IntFloatSortedVectorStorage (com.tencent.angel.ml.math2.storage.IntFloatSortedVectorStorage)43 LongFloatSortedVectorStorage (com.tencent.angel.ml.math2.storage.LongFloatSortedVectorStorage)43