Examples with JDialog javax.swing.JDialog used on opensource projects

Example 76 with JDialog

use of javax.swing.JDialog in project vcell by virtualcell.

the class PDEDataViewer method roiAction.

private void roiAction() {
    BeanUtils.setCursorThroughout(this, Cursor.getPredefinedCursor(Cursor.WAIT_CURSOR));
    try {
        final String[] ROI_COLUMN_NAMES = new String[] { "ROI source", "ROI source name", "ROI Description" };
        final Vector<Object> auxInfoV = new Vector<Object>();
        final DataIdentifier dataIdentifier = getPdeDataContext().getDataIdentifier();
        VariableType variableType = dataIdentifier.getVariableType();
        final boolean isVolume = variableType.equals(VariableType.VOLUME) || variableType.equals(VariableType.VOLUME_REGION);
        DefaultTableModel tableModel = new DefaultTableModel() {

            public boolean isCellEditable(int row, int column) {
                return false;
            }
        };
        for (int i = 0; i < ROI_COLUMN_NAMES.length; i++) {
            tableModel.addColumn(ROI_COLUMN_NAMES[i]);
        }
        // Add Snapshot ROI
        if ((isVolume ? volumeSnapshotROI : membraneSnapshotROI) != null) {
            tableModel.addRow(new Object[] { (isVolume ? "Volume" : "Membrane") + " Variables and Functions", "Snapshot", (isVolume ? volumeSnapshotROIDescription : membraneSnapshotROIDescription) + ", (values = 1.0)" });
            auxInfoV.add((isVolume ? volumeSnapshotROI : membraneSnapshotROI));
        }
        // Add user ROIs
        SpatialSelection[] userROIArr = getPDEDataContextPanel1().fetchSpatialSelections(true, false);
        for (int i = 0; userROIArr != null && i < userROIArr.length; i += 1) {
            String descr = null;
            boolean bPoint = false;
            if (isVolume) {
                if (userROIArr[i] instanceof SpatialSelectionVolume) {
                    Curve curve = ((SpatialSelectionVolume) userROIArr[i]).getCurveSelectionInfo().getCurve();
                    descr = curve.getDescription();
                    if (curve instanceof SinglePoint) {
                        bPoint = true;
                    }
                }
            } else {
                if (userROIArr[i] instanceof SpatialSelectionMembrane) {
                    SampledCurve selectionSource = ((SpatialSelectionMembrane) userROIArr[i]).getSelectionSource();
                    descr = selectionSource.getDescription();
                    if (selectionSource instanceof SinglePoint) {
                        bPoint = true;
                    }
                }
            }
            // Add Area User ROI
            BitSet fillBitSet = null;
            if (userROIArr[i] instanceof SpatialSelectionVolume) {
                fillBitSet = getFillROI((SpatialSelectionVolume) userROIArr[i]);
                if (fillBitSet != null) {
                    tableModel.addRow(new Object[] { "User Defined", descr, "Area Enclosed Volume ROI" });
                    auxInfoV.add(fillBitSet);
                }
            }
            // Add Point and Line User ROI
            if (fillBitSet == null) {
                tableModel.addRow(new Object[] { "User Defined", descr, (bPoint ? "Point" : "Line") + (isVolume ? " Volume" : " Membrane") + " ROI " });
                auxInfoV.add(userROIArr[i]);
            }
        }
        // Add sorted Geometry ROI
        final CartesianMesh cartesianMesh = getPdeDataContext().getCartesianMesh();
        HashMap<Integer, ?> regionMapSubvolumesHashMap = (isVolume ? cartesianMesh.getVolumeRegionMapSubvolume() : cartesianMesh.getMembraneRegionMapSubvolumesInOut());
        Set<?> regionMapSubvolumesEntrySet = regionMapSubvolumesHashMap.entrySet();
        Iterator<?> regionMapSubvolumesEntryIter = regionMapSubvolumesEntrySet.iterator();
        TreeSet<Object[]> sortedGeomROITreeSet = new TreeSet<Object[]>(new Comparator<Object[]>() {

            public int compare(Object[] o1, Object[] o2) {
                int result = ((String) ((Object[]) o1[0])[1]).compareToIgnoreCase((String) ((Object[]) o2[0])[1]);
                if (result == 0) {
                    result = (((Entry<Integer, ?>) o1[1]).getKey()).compareTo(((Entry<Integer, ?>) o2[1]).getKey());
                }
                return result;
            }
        });
        while (regionMapSubvolumesEntryIter.hasNext()) {
            Entry<Integer, ?> regionMapSubvolumesEntry = (Entry<Integer, ?>) regionMapSubvolumesEntryIter.next();
            sortedGeomROITreeSet.add(new Object[] { new Object[] { "Geometry", (isVolume ? getSimulationModelInfo().getVolumeNamePhysiology(((Integer) regionMapSubvolumesEntry.getValue())) : getSimulationModelInfo().getMembraneName(((int[]) regionMapSubvolumesEntry.getValue())[0], ((int[]) regionMapSubvolumesEntry.getValue())[1], false)), (isVolume ? "(svID=" + regionMapSubvolumesEntry.getValue() + " " : "(") + "vrID=" + regionMapSubvolumesEntry.getKey() + ") Predefined " + (isVolume ? "volume" : "membrane") + " region" }, regionMapSubvolumesEntry });
        }
        Iterator<Object[]> sortedGeomROIIter = sortedGeomROITreeSet.iterator();
        while (sortedGeomROIIter.hasNext()) {
            Object[] sortedGeomROIObjArr = (Object[]) sortedGeomROIIter.next();
            tableModel.addRow((Object[]) sortedGeomROIObjArr[0]);
            auxInfoV.add(sortedGeomROIObjArr[1]);
        }
        final ScrollTable roiTable = new ScrollTable();
        roiTable.setModel(tableModel);
        roiTable.setSelectionMode(ListSelectionModel.MULTIPLE_INTERVAL_SELECTION);
        roiTable.setPreferredScrollableViewportSize(new Dimension(500, 200));
        final JPanel mainJPanel = new JPanel();
        BoxLayout mainBL = new BoxLayout(mainJPanel, BoxLayout.Y_AXIS);
        mainJPanel.setLayout(mainBL);
        MiniTimePanel timeJPanel = new MiniTimePanel();
        ActionListener okAction = new ActionListener() {

            public void actionPerformed(ActionEvent e) {
                if (((Double) timeJPanel.jcb_time_begin.getSelectedItem()).compareTo((Double) timeJPanel.jcb_time_end.getSelectedItem()) > 0) {
                    PopupGenerator.showErrorDialog(PDEDataViewer.this, "Selected 'Begin Time' must be less than or equal to 'End Time'");
                    return;
                }
                int[] selectedRows = roiTable.getSelectedRows();
                if (selectedRows != null) {
                    try {
                        BitSet dataBitSet = new BitSet(getPdeDataContext().getDataValues().length);
                        for (int i = 0; i < selectedRows.length; i++) {
                            Object auxInfo = auxInfoV.elementAt(selectedRows[i]);
                            if (auxInfo instanceof BitSet) {
                                dataBitSet.or((BitSet) auxInfo);
                            } else if (auxInfo instanceof SpatialSelectionMembrane) {
                                int[] roiIndexes = ((SpatialSelectionMembrane) auxInfo).getIndexSamples().getSampledIndexes();
                                for (int j = 0; j < roiIndexes.length; j += 1) {
                                    dataBitSet.set(roiIndexes[j], true);
                                }
                            } else if (auxInfo instanceof SpatialSelectionVolume) {
                                int[] roiIndexes = ((SpatialSelectionVolume) auxInfo).getIndexSamples(0, 1).getSampledIndexes();
                                for (int j = 0; j < roiIndexes.length; j += 1) {
                                    dataBitSet.set(roiIndexes[j], true);
                                }
                            } else if (auxInfo instanceof Entry) {
                                Entry<Integer, Integer> entry = (Entry<Integer, Integer>) auxInfo;
                                if (isVolume) {
                                    int volumeRegionID = entry.getKey();
                                    dataBitSet.or(cartesianMesh.getVolumeROIFromVolumeRegionID(volumeRegionID));
                                } else {
                                    int membraneRegionID = entry.getKey();
                                    dataBitSet.or(cartesianMesh.getMembraneROIFromMembraneRegionID(membraneRegionID));
                                }
                            } else if (auxInfo instanceof BitSet) {
                                dataBitSet.or((BitSet) auxInfo);
                            } else {
                                throw new Exception("ROI table, Unknown data type: " + auxInfo.getClass().getName());
                            }
                        }
                        TimeSeriesJobSpec timeSeriesJobSpec = new TimeSeriesJobSpec(new String[] { dataIdentifier.getName() }, new BitSet[] { dataBitSet }, ((Double) timeJPanel.jcb_time_begin.getSelectedItem()).doubleValue(), 1, ((Double) timeJPanel.jcb_time_end.getSelectedItem()).doubleValue(), true, false, VCDataJobID.createVCDataJobID(getDataViewerManager().getUser(), true));
                        Hashtable<String, Object> hash = new Hashtable<String, Object>();
                        hash.put(StringKey_timeSeriesJobSpec, timeSeriesJobSpec);
                        AsynchClientTask task1 = new TimeSeriesDataRetrievalTask("Retrieve data for '" + dataIdentifier + "'", PDEDataViewer.this, getPdeDataContext());
                        AsynchClientTask task2 = new AsynchClientTask("Showing stat for '" + dataIdentifier + "'", AsynchClientTask.TASKTYPE_SWING_BLOCKING) {

                            @Override
                            public void run(Hashtable<String, Object> hashTable) throws Exception {
                                TSJobResultsSpaceStats tsJobResultsSpaceStats = (TSJobResultsSpaceStats) hashTable.get(StringKey_timeSeriesJobResults);
                                plotSpaceStats(tsJobResultsSpaceStats);
                            }
                        };
                        ClientTaskDispatcher.dispatch(PDEDataViewer.this, hash, new AsynchClientTask[] { task1, task2 }, true, true, null);
                    } catch (Exception e1) {
                        e1.printStackTrace();
                        PopupGenerator.showErrorDialog(PDEDataViewer.this, "ROI Error.\n" + e1.getMessage(), e1);
                    }
                }
                BeanUtils.disposeParentWindow(mainJPanel);
            }
        };
        ActionListener cancelAction = new ActionListener() {

            public void actionPerformed(ActionEvent e) {
                BeanUtils.disposeParentWindow(mainJPanel);
            }
        };
        OkCancelSubPanel okCancelJPanel = new OkCancelSubPanel(okAction, cancelAction);
        roiTable.getSelectionModel().addListSelectionListener(new ListSelectionListener() {

            public void valueChanged(ListSelectionEvent e) {
                if (roiTable.getSelectedRows() != null && roiTable.getSelectedRows().length > 0) {
                    okCancelJPanel.okButton.setEnabled(true);
                } else {
                    okCancelJPanel.okButton.setEnabled(false);
                }
            }
        });
        mainJPanel.add(timeJPanel);
        mainJPanel.add(roiTable.getEnclosingScrollPane());
        mainJPanel.add(okCancelJPanel);
        // showComponentInFrame(mainJPanel,
        // "Calculate "+(isVolume?"volume":"membrane")+" statistics for '"+getPdeDataContext().getVariableName()+"'."+
        // "  Choose times and 1 or more ROI(s).");
        Frame dialogOwner = JOptionPane.getFrameForComponent(this);
        JOptionPane inputDialog = new JOptionPane(mainJPanel, JOptionPane.PLAIN_MESSAGE, 0, null, new Object[0]);
        final JDialog d = inputDialog.createDialog(dialogOwner, "Calculate " + (isVolume ? "volume" : "membrane") + " statistics for '" + getPdeDataContext().getVariableName() + "'." + "  Choose times and 1 or more ROI(s).");
        d.setResizable(true);
        try {
            DialogUtils.showModalJDialogOnTop(d, PDEDataViewer.this);
        } finally {
            d.dispose();
        }
    } finally {
        BeanUtils.setCursorThroughout(this, Cursor.getDefaultCursor());
    }
}

Example 77 with JDialog

use of javax.swing.JDialog in project vcell by virtualcell.

the class DialogUtils method showErrorDialog.

/**
 * show error dialog in standard way. If modelInfo is not null user is prompted to allow sending of context information
 * @param requester parent Component, may be null
 * @param message message to display
 * @param exception exception to dialog and possibility email to VCellSupport; may be null
 * @param modelInfo information to include in email to VCellSupport; may be null
 */
public static void showErrorDialog(final Component requester, final String message, final Throwable exception, final ErrorContext errorContext) {
    checkForNull(requester);
    LWContainerHandle lwParent = LWNamespace.findLWOwner(requester);
    Doer doer = () -> {
        String errMsg = message;
        boolean sendErrorReport = false;
        if (errMsg == null || errMsg.trim().length() == 0) {
            errMsg = "Virtual Cell has encountered a problem. Please tell Virtual Cell about this problem to help improve Virtual Cell.";
            if (exception != null) {
                sendErrorReport = true;
            }
        }
        if (exception instanceof ClassCastException || exception instanceof ArrayIndexOutOfBoundsException || exception instanceof NullPointerException || exception instanceof Error) {
            sendErrorReport = true;
        }
        final boolean goingToEmail = sendErrorReport && VCellClientTest.getVCellClient() != null;
        DialogMessagePanel dialogMessagePanel;
        if (goingToEmail) {
            dialogMessagePanel = MessagePanelFactory.createExtended(errMsg, errorContext);
        } else {
            dialogMessagePanel = MessagePanelFactory.createNonSending(errMsg);
        }
        Collection<String> suggestions = ExceptionInterpreter.instance().suggestions(message);
        if (suggestions != null) {
            SuggestionPanel sp = new SuggestionPanel();
            sp.setSuggestedSolution(suggestions);
            dialogMessagePanel.add(sp, BorderLayout.NORTH);
        }
        JOptionPane pane = new JOptionPane(dialogMessagePanel, JOptionPane.ERROR_MESSAGE, dialogMessagePanel.optionType());
        JDialog dialog = new LWTitledOptionPaneDialog(lwParent, "Error", pane);
        dialog.setResizable(true);
        try {
            dialog.setVisible(true);
            if (goingToEmail) {
                Object ro = pane.getValue();
                Integer reply = BeanUtils.downcast(Integer.class, ro);
                boolean userSaidYes = reply != null ? reply == JOptionPane.YES_OPTION : false;
                if (userSaidYes) {
                    Throwable throwableToSend = exception;
                    String extra = dialogMessagePanel.getSupplemental();
                    extra = BeanUtils.PLAINTEXT_EMAIL_NEWLINE + (extra == null ? "" : extra) + collectRecordedUserEvents();
                    throwableToSend = new RuntimeException(extra, exception);
                    VCellClientTest.getVCellClient().getClientServerManager().sendErrorReport(throwableToSend);
                }
            }
        } finally {
            dialog.dispose();
        }
    };
    VCSwingFunction.executeConsumeException(doer);
}

Example 78 with JDialog

use of javax.swing.JDialog in project vcell by virtualcell.

the class DialogUtils method showComponentOKCancelDialog.

public static int showComponentOKCancelDialog(final Component requester, final Component stayOnTopComponent, final String title, final OKEnabler okEnabler, boolean isResizeable) {
    checkForNull(requester);
    LWContainerHandle lwParent = LWNamespace.findLWOwner(requester);
    Producer<Integer> prod = () -> {
        JOptionPane inputDialog = new JOptionPane(stayOnTopComponent, JOptionPane.PLAIN_MESSAGE, JOptionPane.DEFAULT_OPTION, null, new String[] { getOKText(), getCancelText() });
        JDialog d = new LWTitledOptionPaneDialog(lwParent, title, inputDialog);
        d.setResizable(isResizeable);
        if (okEnabler != null) {
            okEnabler.setJOptionPane(inputDialog);
        }
        try {
            d.setVisible(true);
            if (inputDialog.getValue() instanceof String) {
                if (inputDialog.getValue().equals(getOKText())) {
                    return JOptionPane.OK_OPTION;
                }
                if (inputDialog.getValue().equals(getCancelText())) {
                    return JOptionPane.CANCEL_OPTION;
                }
            } else if (inputDialog.getValue() == null) {
                return JOptionPane.CLOSED_OPTION;
            } else if (inputDialog.getValue().equals(JOptionPane.UNINITIALIZED_VALUE)) {
                return JOptionPane.CLOSED_OPTION;
            }
            throw new RuntimeException("Unexpected return value=" + inputDialog.getValue().toString());
        } finally {
            d.dispose();
        }
    };
    return VCSwingFunction.executeAsRuntimeException(prod);
}

Example 79 with JDialog

use of javax.swing.JDialog in project vcell by virtualcell.

the class DialogUtils method showComponentCloseDialog.

/**
 * Insert the method's description here.
 * Creation date: (5/21/2004 3:17:45 AM)
 * @param owner java.awt.Component
 * @param message java.lang.Object
 */
public static void showComponentCloseDialog(final Component requester, final Component stayOnTopComponent, final String title) {
    checkForNull(requester);
    LWContainerHandle lwParent = LWNamespace.findLWOwner(requester);
    Doer doer = () -> {
        JOptionPane inputDialog = new JOptionPane(stayOnTopComponent, JOptionPane.PLAIN_MESSAGE, 0, null, new Object[] { "Close" });
        final JDialog d = new LWTitledOptionPaneDialog(lwParent, title, inputDialog);
        d.setResizable(true);
        try {
            d.setVisible(true);
        } finally {
            d.dispose();
        }
    };
    VCSwingFunction.executeAsRuntimeException(doer);
}

Example 80 with JDialog

use of javax.swing.JDialog in project vcell by virtualcell.

the class DialogUtils method showComponentOptionsTableList.

public static TableListResult showComponentOptionsTableList(final Component requester, final String title, final String[] columnNames, final Object[][] rowDataOrig, final Integer listSelectionModel_SelectMode, final ListSelectionListener listSelectionListener, final String[] options, final String initOption, final Comparator<Object> rowSortComparator, final boolean bModal) throws UserCancelException {
    // //Create hidden column with original row index so original row index can
    // //be returned for user selections even if rows are sorted
    // final int hiddenColumnIndex = rowDataOrig[0].length;
    // final Object[][] rowDataHiddenIndex = new Object[rowDataOrig.length][hiddenColumnIndex+1];
    // for (int i = 0; i < rowDataHiddenIndex.length; i++) {
    // for (int j = 0; j < rowDataOrig[i].length; j++) {
    // rowDataHiddenIndex[i][j] = rowDataOrig[i][j];
    // }
    // rowDataHiddenIndex[i][hiddenColumnIndex] = i;
    // }
    Producer<TableListResult> prod = () -> {
        // Create hidden column with original row index so original row index can
        // be returned for user selections even if rows are sorted
        int hiddenColumnIndex = rowDataOrig[0].length;
        Object[][] rowDataHiddenIndex = rowDataOrig;
        if (rowSortComparator != null) {
            rowDataHiddenIndex = new Object[rowDataOrig.length][hiddenColumnIndex + 1];
            for (int i = 0; i < rowDataHiddenIndex.length; i++) {
                for (int j = 0; j < rowDataOrig[i].length; j++) {
                    rowDataHiddenIndex[i][j] = rowDataOrig[i][j];
                }
                rowDataHiddenIndex[i][hiddenColumnIndex] = i;
            }
        }
        @SuppressWarnings("serial") VCellSortTableModel<Object[]> tableModel = new VCellSortTableModel<Object[]>(columnNames, rowDataOrig.length) {

            @Override
            public boolean isSortable(int col) {
                if (rowSortComparator != null) {
                    return true;
                }
                return false;
            }

            public Object getValueAt(int row, int column) {
                return getValueAt(row)[column];
            }

            @Override
            public Comparator<Object[]> getComparator(final int col, final boolean ascending) {
                return new Comparator<Object[]>() {

                    public int compare(Object[] o1, Object[] o2) {
                        if (ascending) {
                            return rowSortComparator.compare(o1[col], o2[col]);
                        }
                        return rowSortComparator.compare(o2[col], o1[col]);
                    }
                };
            }
        };
        final JSortTable table = new JSortTable();
        // table.setAutoResizeMode(JTable.AUTO_RESIZE_ALL_COLUMNS);
        table.setModel(tableModel);
        tableModel.setData(Arrays.asList(rowDataHiddenIndex));
        if (listSelectionModel_SelectMode != null) {
            table.setSelectionMode(listSelectionModel_SelectMode);
        } else {
            table.setRowSelectionAllowed(false);
            table.setColumnSelectionAllowed(false);
        }
        table.setPreferredScrollableViewportSize(new Dimension(500, 250));
        table.disableUneditableForeground();
        OKEnabler tableListOKEnabler = null;
        if (listSelectionModel_SelectMode != null) {
            tableListOKEnabler = new OKEnabler() {

                private JOptionPane jop;

                public void setJOptionPane(JOptionPane joptionPane) {
                    jop = joptionPane;
                    setInternalNotCancelEnabled(joptionPane, false, false);
                    table.getSelectionModel().addListSelectionListener(new ListSelectionListener() {

                        public void valueChanged(ListSelectionEvent e) {
                            if (!e.getValueIsAdjusting()) {
                                if (table.getSelectedRowCount() != 0) {
                                    setInternalNotCancelEnabled(jop, true, false);
                                } else {
                                    setInternalNotCancelEnabled(jop, false, false);
                                }
                            }
                        }
                    });
                }
            };
        }
        if (listSelectionListener != null) {
            table.getSelectionModel().addListSelectionListener(listSelectionListener);
        }
        TableListResult tableListResult = new TableListResult();
        // HACK to fix horizontal scrollbar not showing for large horizontal tables
        // workaround code from: http://bugs.sun.com/view_bug.do?bug_id=4127936
        final JScrollPane[] jScrollPaneArr = new JScrollPane[1];
        Component[] components = table.getEnclosingScrollPane().getComponents();
        for (int i = 0; i < components.length; i++) {
            if (components[i] instanceof JScrollPane) {
                jScrollPaneArr[0] = (JScrollPane) components[i];
                break;
            }
        }
        if (jScrollPaneArr[0] != null) {
            jScrollPaneArr[0].addComponentListener(new ComponentAdapter() {

                @Override
                public void componentResized(ComponentEvent e) {
                    super.componentResized(e);
                    if (table.getPreferredSize().width <= jScrollPaneArr[0].getViewport().getExtentSize().width) {
                        table.setAutoResizeMode(JTable.AUTO_RESIZE_ALL_COLUMNS);
                    } else {
                        table.setAutoResizeMode(JTable.AUTO_RESIZE_OFF);
                    }
                }
            });
        }
        if (options == null) {
            if (bModal) {
                if (showComponentOKCancelDialog(requester, table.getEnclosingScrollPane(), title, tableListOKEnabler) != JOptionPane.OK_OPTION) {
                    throw UserCancelException.CANCEL_GENERIC;
                }
            } else {
                // display non-modal
                JOptionPane jOptionPane = new JOptionPane(table.getEnclosingScrollPane(), JOptionPane.INFORMATION_MESSAGE);
                JDialog jDialog = jOptionPane.createDialog(requester, title);
                jDialog.setResizable(true);
                jDialog.setModal(false);
                jDialog.pack();
                jDialog.setDefaultCloseOperation(JDialog.DISPOSE_ON_CLOSE);
                jDialog.setVisible(true);
            }
            tableListResult.selectedTableRows = table.getSelectedRows();
        } else {
            tableListResult.selectedOption = showOptionsDialog(requester, table.getEnclosingScrollPane(), JOptionPane.QUESTION_MESSAGE, options, initOption, tableListOKEnabler, title);
            tableListResult.selectedTableRows = table.getSelectedRows();
        }
        if (rowSortComparator != null) {
            // return the index of the original unsorted object array that corresponds to the user row selections
            for (int i = 0; i < tableListResult.selectedTableRows.length; i++) {
                tableListResult.selectedTableRows[i] = (Integer) (tableModel.getValueAt(tableListResult.selectedTableRows[i])[hiddenColumnIndex]);
            }
        }
        return tableListResult;
    };
    return VCSwingFunction.executeAsRuntimeException(prod);
}