use of javax.xml.transform.TransformerConfigurationException in project goci by EBISPOT.
the class ChromosomeRenderlet method render.
public void render(RenderletNexus nexus, C context, E entity) {
int position = getPosition();
int height = SVGCanvas.canvasHeight;
int width = SVGCanvas.canvasWidth;
double chromWidth = (double) width / 12;
double chromHeight = (double) height / 2;
double xCoordinate;
double yCoordinate = 0;
if (position < 12) {
xCoordinate = position * chromWidth;
} else {
xCoordinate = (position - 12) * chromWidth;
yCoordinate = (double) height / 2;
}
InputStream in = null;
try {
in = getSVGFile().openStream();
DocumentBuilderFactory dbf = DocumentBuilderFactory.newInstance();
DocumentBuilder db = dbf.newDocumentBuilder();
Document chromSVG = db.parse(in);
Element root = chromSVG.getDocumentElement();
Element g = (Element) root.getElementsByTagName("g").item(0).cloneNode(true);
setChromBands(g, nexus);
StringBuilder builder = new StringBuilder();
builder.append("translate(");
builder.append(Double.toString(xCoordinate));
builder.append(",");
builder.append(Double.toString(yCoordinate));
builder.append(")");
g.setAttribute("transform", builder.toString());
g.setAttribute("gwasname", getName());
g.removeAttribute("title");
SVGArea currentArea = new SVGArea(xCoordinate, yCoordinate, chromWidth, chromHeight, 0);
TransformerFactory transFactory = TransformerFactory.newInstance();
Transformer transformer = transFactory.newTransformer();
StringWriter buffer = new StringWriter();
transformer.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "yes");
transformer.transform(new DOMSource(g), new StreamResult(buffer));
String str = buffer.toString();
RenderingEvent<E> event = new RenderingEvent<E>(entity, str, currentArea, this);
nexus.renderingEventOccurred(event);
} catch (ParserConfigurationException e) {
throw new RuntimeException("Failed to read in template chromosome SVG from original resource", e);
} catch (SAXException e) {
throw new RuntimeException("Failed to read in template chromosome SVG from original resource", e);
} catch (IOException e) {
throw new RuntimeException("Failed to render chromosome SVG", e);
} catch (TransformerConfigurationException e) {
throw new RuntimeException("Failed to render chromosome SVG", e);
} catch (TransformerException e) {
throw new RuntimeException("Failed to render chromosome SVG", e);
} finally {
if (in != null) {
try {
in.close();
} catch (IOException e) {
// tried our best!
}
}
}
}
use of javax.xml.transform.TransformerConfigurationException in project OpenClinica by OpenClinica.
the class XsltTransformJob method executeInternal.
@Override
protected void executeInternal(JobExecutionContext context) {
logger.info("Job " + context.getJobDetail().getDescription() + " started.");
initDependencies(context.getScheduler());
// need to generate a Locale for emailing users with i18n
// TODO make dynamic?
Locale locale = new Locale("en-US");
ResourceBundleProvider.updateLocale(locale);
ResourceBundle pageMessages = ResourceBundleProvider.getPageMessagesBundle();
List<File> markForDelete = new LinkedList<File>();
Boolean zipped = true;
Boolean deleteOld = true;
Boolean exceptions = false;
JobDataMap dataMap = context.getMergedJobDataMap();
String localeStr = dataMap.getString(LOCALE);
String[] doNotDeleteUntilExtract = new String[4];
int cnt = dataMap.getInt("count");
DatasetBean datasetBean = null;
if (localeStr != null) {
locale = new Locale(localeStr);
ResourceBundleProvider.updateLocale(locale);
pageMessages = ResourceBundleProvider.getPageMessagesBundle();
}
// get the file information from the job
String alertEmail = dataMap.getString(EMAIL);
java.io.InputStream in = null;
FileOutputStream endFileStream = null;
UserAccountBean userBean = null;
try {
// init all fields from the data map
int userAccountId = dataMap.getInt(USER_ID);
int studyId = dataMap.getInt(STUDY_ID);
String outputPath = dataMap.getString(POST_FILE_PATH);
// get all user info, generate xml
logger.debug("found output path: " + outputPath);
String generalFileDir = dataMap.getString(XML_FILE_PATH);
int dsId = dataMap.getInt(DATASET_ID);
// JN: Change from earlier versions, cannot get static reference as
// static references don't work. Reason being for example there could be
// datasetId as a variable which is different for each dataset and
// that needs to be loaded dynamically
ExtractPropertyBean epBean = (ExtractPropertyBean) dataMap.get(EP_BEAN);
File doNotDelDir = new File(generalFileDir);
if (doNotDelDir.isDirectory()) {
doNotDeleteUntilExtract = doNotDelDir.list();
}
zipped = epBean.getZipFormat();
deleteOld = epBean.getDeleteOld();
long sysTimeBegin = System.currentTimeMillis();
userBean = (UserAccountBean) userAccountDao.findByPK(userAccountId);
StudyBean currentStudy = (StudyBean) studyDao.findByPK(studyId);
StudyBean parentStudy = (StudyBean) studyDao.findByPK(currentStudy.getParentStudyId());
String successMsg = epBean.getSuccessMessage();
String failureMsg = epBean.getFailureMessage();
final long start = System.currentTimeMillis();
datasetBean = (DatasetBean) datasetDao.findByPK(dsId);
ExtractBean eb = generateFileService.generateExtractBean(datasetBean, currentStudy, parentStudy);
// generate file directory for file service
datasetBean.setName(datasetBean.getName().replaceAll(" ", "_"));
logger.debug("--> job starting: ");
HashMap<String, Integer> answerMap = odmFileCreation.createODMFile(epBean.getFormat(), sysTimeBegin, generalFileDir, datasetBean, currentStudy, "", eb, currentStudy.getId(), currentStudy.getParentStudyId(), "99", (Boolean) dataMap.get(ZIPPED), false, (Boolean) dataMap.get(DELETE_OLD), epBean.getOdmType(), userBean);
// won't save a record of the XML to db
// won't be a zipped file, so that we can submit it for
// transformation
// this will have to be toggled by the export data format? no, the
// export file will have to be zipped/not zipped
String ODMXMLFileName = "";
int fId = 0;
Iterator<Entry<String, Integer>> it = answerMap.entrySet().iterator();
while (it.hasNext()) {
JobTerminationMonitor.check();
Entry<String, Integer> entry = it.next();
String key = entry.getKey();
Integer value = entry.getValue();
// JN: Since there is a logic to
ODMXMLFileName = key;
// delete all the intermittent
// files, this file could be a zip
// file.
Integer fileID = value;
fId = fileID.intValue();
logger.debug("found " + fId + " and " + ODMXMLFileName);
}
logger.info("Finished ODM generation of job " + context.getJobDetail().getDescription());
// create dirs
File output = new File(outputPath);
if (!output.isDirectory()) {
output.mkdirs();
}
int numXLS = epBean.getFileName().length;
int fileCntr = 0;
String xmlFilePath = new File(generalFileDir + ODMXMLFileName).toURI().toURL().toExternalForm();
String endFile = null;
File oldFilesPath = new File(generalFileDir);
while (fileCntr < numXLS) {
JobTerminationMonitor.check();
String xsltPath = dataMap.getString(XSLT_PATH) + File.separator + epBean.getFileName()[fileCntr];
in = new java.io.FileInputStream(xsltPath);
Transformer transformer = transformerFactory.newTransformer(new StreamSource(in));
endFile = outputPath + File.separator + epBean.getExportFileName()[fileCntr];
endFileStream = new FileOutputStream(endFile);
transformer.transform(new StreamSource(xmlFilePath), new StreamResult(endFileStream));
// JN...CLOSE THE STREAM...HMMMM
in.close();
endFileStream.close();
fileCntr++;
JobTerminationMonitor.check();
}
if (oldFilesPath.isDirectory()) {
markForDelete = Arrays.asList(oldFilesPath.listFiles());
// logic to prevent deleting the file being created.
}
final double done = setFormat(new Double(System.currentTimeMillis() - start) / 1000);
logger.info("--> job completed in " + done + " ms");
// run post processing
ProcessingFunction function = epBean.getPostProcessing();
String subject = "";
String jobName = dataMap.getString(XsltTriggerService.JOB_NAME);
StringBuffer emailBuffer = new StringBuffer("");
emailBuffer.append("<p>" + pageMessages.getString("email_header_1") + " " + EmailEngine.getAdminEmail() + " " + pageMessages.getString("email_header_2") + " Job Execution " + pageMessages.getString("email_header_3") + "</p>");
emailBuffer.append("<P>Dataset: " + datasetBean.getName() + "</P>");
emailBuffer.append("<P>Study: " + currentStudy.getName() + "</P>");
if (function != null && function.getClass().equals(org.akaza.openclinica.bean.service.SqlProcessingFunction.class)) {
String dbUrl = ((org.akaza.openclinica.bean.service.SqlProcessingFunction) function).getDatabaseUrl();
int lastIndex = dbUrl.lastIndexOf('/');
String schemaName = dbUrl.substring(lastIndex);
int HostIndex = dbUrl.substring(0, lastIndex).indexOf("//");
String Host = dbUrl.substring(HostIndex, lastIndex);
emailBuffer.append("<P>Database: " + ((org.akaza.openclinica.bean.service.SqlProcessingFunction) function).getDatabaseType() + "</P>");
emailBuffer.append("<P>Schema: " + schemaName.replace("/", "") + "</P>");
emailBuffer.append("<P>Host: " + Host.replace("//", "") + "</P>");
}
emailBuffer.append("<p>" + pageMessages.getString("html_email_body_1") + datasetBean.getName() + pageMessages.getString("html_email_body_2_2") + "</p>");
if (function != null) {
function.setTransformFileName(outputPath + File.separator + dataMap.getString(POST_FILE_NAME));
function.setODMXMLFileName(endFile);
function.setXslFileName(dataMap.getString(XSL_FILE_PATH));
function.setDeleteOld((Boolean) dataMap.get(POST_PROC_DELETE_OLD));
function.setZip((Boolean) dataMap.get(POST_PROC_ZIP));
function.setLocation(dataMap.getString(POST_PROC_LOCATION));
function.setExportFileName(dataMap.getString(POST_PROC_EXPORT_NAME));
File[] oldFiles = getOldFiles(outputPath, dataMap.getString(POST_PROC_LOCATION));
function.setOldFiles(oldFiles);
File[] intermediateFiles = getInterFiles(dataMap.getString(POST_FILE_PATH));
ProcessingResultType message = function.run();
// Delete these files only in case when there is no failure
if (message.getCode().intValue() != 2) {
deleteOldFiles(intermediateFiles);
}
final long done2 = System.currentTimeMillis() - start;
logger.info("--> postprocessing completed in " + done2 + " ms, found result type " + message.getCode());
logger.info("--> postprocessing completed in " + done2 + " ms, found result type " + message.getCode());
if (!function.getClass().equals(org.akaza.openclinica.bean.service.SqlProcessingFunction.class)) {
String archivedFile = dataMap.getString(POST_FILE_NAME) + "." + function.getFileType();
// download the zip file
if (function.isZip()) {
archivedFile = archivedFile + ".zip";
}
// post processing as well.
if (function.getClass().equals(org.akaza.openclinica.bean.service.PdfProcessingFunction.class)) {
archivedFile = function.getArchivedFileName();
}
ArchivedDatasetFileBean fbFinal = generateFileRecord(archivedFile, outputPath, datasetBean, done, new File(outputPath + File.separator + archivedFile).length(), ExportFormatBean.PDFFILE, userAccountId);
if (successMsg.contains("$linkURL")) {
successMsg = successMsg.replace("$linkURL", "<a href=\"" + CoreResources.getField("sysURL.base") + "AccessFile?fileId=" + fbFinal.getId() + "\">" + CoreResources.getField("sysURL.base") + "AccessFile?fileId=" + fbFinal.getId() + " </a>");
}
emailBuffer.append("<p>" + successMsg + "</p>");
logger.debug("System time begining.." + sysTimeBegin);
logger.debug("System time end.." + System.currentTimeMillis());
double sysTimeEnd = setFormat((System.currentTimeMillis() - sysTimeBegin) / 1000);
logger.debug("difference" + sysTimeEnd);
if (fbFinal != null) {
fbFinal.setFileSize((int) bytesToKilo(new File(archivedFile).length()));
fbFinal.setRunTime(sysTimeEnd);
}
}
// otherwise don't do it
if (message.getCode().intValue() == 1) {
if (jobName != null) {
subject = "Success: " + jobName;
} else {
subject = "Success: " + datasetBean.getName();
}
} else if (message.getCode().intValue() == 2) {
if (jobName != null) {
subject = "Failure: " + jobName;
} else {
subject = "Failure: " + datasetBean.getName();
}
if (failureMsg != null && !failureMsg.isEmpty()) {
emailBuffer.append(failureMsg);
}
emailBuffer.append("<P>").append(message.getDescription());
postErrorMessage(message.getDescription(), context);
} else if (message.getCode().intValue() == 3) {
if (jobName != null) {
subject = "Update: " + jobName;
} else {
subject = "Update: " + datasetBean.getName();
}
}
} else {
// extract ran but no post-processing - we send an email with
// success and url to link to
// generate archived dataset file bean here, and use the id to
// build the URL
String archivedFilename = dataMap.getString(POST_FILE_NAME);
// the zip file
if (zipped) {
archivedFilename = dataMap.getString(POST_FILE_NAME) + ".zip";
}
// delete old files now
List<File> intermediateFiles = generateFileService.getOldFiles();
String[] dontDelFiles = epBean.getDoNotDelFiles();
//JN: The following is the code for zipping up the files, in case of more than one xsl being provided.
if (dontDelFiles.length > 1 && zipped) {
logger.debug("count =====" + cnt + "dontDelFiles length==---" + dontDelFiles.length);
logger.debug("Entering this?" + cnt + "dontDelFiles" + dontDelFiles);
String path = outputPath + File.separator;
logger.debug("path = " + path);
logger.debug("zipName?? = " + epBean.getZipName());
String zipName = epBean.getZipName() == null || epBean.getZipName().isEmpty() ? endFile + ".zip" : path + epBean.getZipName() + ".zip";
archivedFilename = new File(zipName).getName();
zipAll(path, epBean.getDoNotDelFiles(), zipName);
String[] tempArray = { archivedFilename };
dontDelFiles = tempArray;
endFile = archivedFilename;
} else if (zipped) {
markForDelete = zipxmls(markForDelete, endFile);
endFile = endFile + ".zip";
String[] temp = new String[dontDelFiles.length];
int i = 0;
while (i < dontDelFiles.length) {
temp[i] = dontDelFiles[i] + ".zip";
i++;
}
dontDelFiles = temp;
// Actually deleting all the xml files which are produced
// since its zipped
FilenameFilter xmlFilter = new XMLFileFilter();
File tempFile = new File(generalFileDir);
deleteOldFiles(tempFile.listFiles(xmlFilter));
}
ArchivedDatasetFileBean fbFinal = generateFileRecord(archivedFilename, outputPath, datasetBean, done, new File(outputPath + File.separator + archivedFilename).length(), ExportFormatBean.TXTFILE, userAccountId);
if (jobName != null) {
subject = "Job Ran: " + jobName;
} else {
subject = "Job Ran: " + datasetBean.getName();
}
if (successMsg == null || successMsg.isEmpty()) {
logger.info("email buffer??" + emailBuffer);
} else {
if (successMsg.contains("$linkURL")) {
successMsg = successMsg.replace("$linkURL", "<a href=\"" + CoreResources.getField("sysURL.base") + "AccessFile?fileId=" + fbFinal.getId() + "\">" + CoreResources.getField("sysURL.base") + "AccessFile?fileId=" + fbFinal.getId() + " </a>");
}
emailBuffer.append("<p>" + successMsg + "</p>");
}
if (deleteOld) {
deleteIntermFiles(intermediateFiles, endFile, dontDelFiles);
deleteIntermFiles(markForDelete, endFile, dontDelFiles);
}
}
// email the message to the user
emailBuffer.append("<p>" + pageMessages.getString("html_email_body_5") + "</p>");
try {
// @pgawade 19-April-2011 Log the event into audit_event table
if (null != dataMap.get("job_type") && ((String) dataMap.get("job_type")).equalsIgnoreCase("exportJob")) {
String extractName = (String) dataMap.get(XsltTriggerService.JOB_NAME);
TriggerBean triggerBean = new TriggerBean();
triggerBean.setDataset(datasetBean);
triggerBean.setUserAccount(userBean);
triggerBean.setFullName(extractName);
String actionMsg = "You may access the " + (String) dataMap.get(XsltTriggerService.EXPORT_FORMAT) + " file by changing your study/site to " + currentStudy.getName() + " and selecting the Export Data icon for " + datasetBean.getName() + " dataset on the View Datasets page.";
auditEventDAO.createRowForExtractDataJobSuccess(triggerBean, actionMsg);
}
mailSender.sendEmail(alertEmail, EmailEngine.getAdminEmail(), subject, emailBuffer.toString(), true);
} catch (OpenClinicaSystemException ose) {
// Do Nothing, In the future we might want to have an email
// status added to system.
logger.info("exception sending mail: " + ose.getMessage());
logger.error("exception sending mail: " + ose.getMessage());
}
logger.info("just sent email to " + alertEmail + ", from " + EmailEngine.getAdminEmail());
if (successMsg == null) {
successMsg = " ";
}
postSuccessMessage(successMsg, context);
} catch (JobInterruptedException e) {
logger.info("Job was cancelled by the user");
exceptions = true;
} catch (TransformerConfigurationException e) {
sendErrorEmail(e.getMessage(), context, alertEmail);
postErrorMessage(e.getMessage(), context);
logger.error("Error executing extract", e);
exceptions = true;
} catch (FileNotFoundException e) {
sendErrorEmail(e.getMessage(), context, alertEmail);
postErrorMessage(e.getMessage(), context);
logger.error("Error executing extract", e);
exceptions = true;
} catch (TransformerFactoryConfigurationError e) {
sendErrorEmail(e.getMessage(), context, alertEmail);
postErrorMessage(e.getMessage(), context);
logger.error("Error executing extract", e);
exceptions = true;
} catch (TransformerException e) {
sendErrorEmail(e.getMessage(), context, alertEmail);
postErrorMessage(e.getMessage(), context);
logger.error("Error executing extract", e);
exceptions = true;
} catch (Exception ee) {
sendErrorEmail(ee.getMessage(), context, alertEmail);
postErrorMessage(ee.getMessage(), context);
logger.error("Error executing extract", ee);
exceptions = true;
if (null != dataMap.get("job_type") && ((String) dataMap.get("job_type")).equalsIgnoreCase("exportJob")) {
TriggerBean triggerBean = new TriggerBean();
triggerBean.setUserAccount(userBean);
triggerBean.setFullName((String) dataMap.get(XsltTriggerService.JOB_NAME));
auditEventDAO.createRowForExtractDataJobFailure(triggerBean);
}
} finally {
if (in != null)
try {
in.close();
} catch (IOException e) {
logger.error("Error executing extract", e);
}
if (endFileStream != null)
try {
endFileStream.close();
} catch (IOException e) {
logger.error("Error executing extract", e);
}
if (exceptions) {
logger.debug("EXCEPTIONS... EVEN TEHN DELETING OFF OLD FILES");
String generalFileDir = dataMap.getString(XML_FILE_PATH);
File oldFilesPath = new File(generalFileDir);
if (oldFilesPath.isDirectory()) {
markForDelete = Arrays.asList(oldFilesPath.listFiles());
}
logger.debug("deleting the old files reference from archive dataset");
if (deleteOld) {
deleteIntermFiles(markForDelete, "", doNotDeleteUntilExtract);
}
}
if (datasetBean != null)
resetArchiveDataset(datasetBean.getId());
logger.info("Job " + context.getJobDetail().getDescription() + " finished.");
}
}
use of javax.xml.transform.TransformerConfigurationException in project series-rest-api by 52North.
the class PDFReportGenerator method encodeAndWriteTo.
@Override
public void encodeAndWriteTo(DataCollection<QuantityData> data, OutputStream stream) throws IoParseException {
try {
generateOutput(data);
DefaultConfigurationBuilder cfgBuilder = new DefaultConfigurationBuilder();
Configuration cfg = cfgBuilder.build(document.newInputStream());
FopFactory fopFactory = new FopFactoryBuilder(baseURI).setConfiguration(cfg).build();
final String mimeType = MimeType.APPLICATION_PDF.getMimeType();
Fop fop = fopFactory.newFop(mimeType, stream);
//FopFactory fopFactory = FopFactory.newInstance(cfg);
//Fop fop = fopFactory.newFop(APPLICATION_PDF.getMimeType(), stream);
//FopFactory fopFactory = fopFactoryBuilder.build();
//Fop fop = fopFactory.newFop(APPLICATION_PDF.getMimeType(), stream);
// Create PDF via XSLT transformation
TransformerFactory transFact = TransformerFactory.newInstance();
StreamSource transformationRule = getTransforamtionRule();
Transformer transformer = transFact.newTransformer(transformationRule);
Source source = new StreamSource(document.newInputStream());
Result result = new SAXResult(fop.getDefaultHandler());
if (LOGGER.isDebugEnabled()) {
try {
File tempFile = File.createTempFile(TEMP_FILE_PREFIX, ".xml");
StreamResult debugResult = new StreamResult(tempFile);
transformer.transform(source, debugResult);
String xslResult = XmlObject.Factory.parse(tempFile).xmlText();
LOGGER.debug("xsl-fo input (locale '{}'): {}", i18n.getTwoDigitsLanguageCode(), xslResult);
} catch (IOException | TransformerException | XmlException e) {
LOGGER.error("Could not debug XSL result output!", e);
}
}
// XXX debug, diagram is not embedded
transformer.transform(source, result);
} catch (FOPException e) {
throw new IoParseException("Failed to create Formatting Object Processor (FOP)", e);
} catch (SAXException | ConfigurationException | IOException e) {
throw new IoParseException("Failed to read config for Formatting Object Processor (FOP)", e);
} catch (TransformerConfigurationException e) {
throw new IoParseException("Invalid transform configuration. Inspect xslt!", e);
} catch (TransformerException e) {
throw new IoParseException("Could not generate PDF report!", e);
}
}
use of javax.xml.transform.TransformerConfigurationException in project OpenClinica by OpenClinica.
the class XalanTransformJob method executeInternal.
protected void executeInternal(JobExecutionContext context) throws JobExecutionException {
// need to generate a Locale so that user beans and other things will
// generate normally
// TODO make dynamic?
Locale locale = new Locale("en-US");
ResourceBundleProvider.updateLocale(locale);
ResourceBundle pageMessages = ResourceBundleProvider.getPageMessagesBundle();
JobDataMap dataMap = context.getMergedJobDataMap();
// get the file information from the job
String alertEmail = dataMap.getString(EMAIL);
try {
TransformerFactory tFactory = TransformerFactory.newInstance();
// Use the TransformerFactory to instantiate a Transformer that will work with
// the stylesheet you specify. This method call also processes the stylesheet
// into a compiled Templates object.
java.io.InputStream in = new java.io.FileInputStream(dataMap.getString(XSL_FILE_PATH));
// tFactory.setAttribute("use-classpath", Boolean.TRUE);
// tFactory.setErrorListener(new ListingErrorHandler());
Transformer transformer = tFactory.newTransformer(new StreamSource(in));
// Use the Transformer to apply the associated Templates object to an XML document
// (foo.xml) and write the output to a file (foo.out).
// System.out.println("--> job starting: ");
final long start = System.currentTimeMillis();
transformer.transform(new StreamSource(dataMap.getString(XML_FILE_PATH)), new StreamResult(new FileOutputStream(dataMap.getString(SQL_FILE_PATH))));
final long done = System.currentTimeMillis() - start;
// System.out.println("--> job completed in " + done + " ms");
} catch (TransformerConfigurationException e) {
// TODO Auto-generated catch block
e.printStackTrace();
} catch (FileNotFoundException e) {
// TODO Auto-generated catch block
e.printStackTrace();
} catch (TransformerFactoryConfigurationError e) {
// TODO Auto-generated catch block
e.printStackTrace();
} catch (TransformerException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
use of javax.xml.transform.TransformerConfigurationException in project midpoint by Evolveum.
the class DOMUtil method printDom.
public static StringBuffer printDom(Node node, boolean indent, boolean omitXmlDeclaration) {
StringWriter writer = new StringWriter();
TransformerFactory transfac = TransformerFactory.newInstance();
Transformer trans;
try {
trans = transfac.newTransformer();
} catch (TransformerConfigurationException e) {
throw new SystemException("Error in XML configuration: " + e.getMessage(), e);
}
trans.setOutputProperty(OutputKeys.INDENT, (indent ? "yes" : "no"));
// XALAN-specific
trans.setOutputProperty("{http://xml.apache.org/xslt}indent-amount", "4");
trans.setParameter(OutputKeys.ENCODING, "utf-8");
// Note: serialized XML does not contain xml declaration
trans.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, (omitXmlDeclaration ? "yes" : "no"));
DOMSource source = new DOMSource(node);
try {
trans.transform(source, new StreamResult(writer));
} catch (TransformerException e) {
throw new SystemException("Error in XML transformation: " + e.getMessage(), e);
}
return writer.getBuffer();
}
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