Examples with ModuloAnnotation loci.formats.meta.ModuloAnnotation used on opensource projects

Example 1 with ModuloAnnotation

use of loci.formats.meta.ModuloAnnotation in project bioformats by openmicroscopy.

the class OMEXMLServiceImpl method createModulo.

/**
 * Create a ModuloAlong* annotation corresponding to the given
 * {@link loci.formats.Modulo}.
 * @param meta the OMEXMLMetadata in which to create the annotation
 * @param modulo the Modulo object that contains the annotation data
 * @param annotations the list of existing annotations
 * @param image the Image to which the new annotation should be linked
 * @param imageIdx the index of the Image
 * @param annotationIndex the index to be assigned to the new annotation
 * @param imageAnnotation the index to be assigned to the new annotation link
 */
private void createModulo(final OMEXMLMetadata meta, final Modulo modulo, final StructuredAnnotations annotations, final Image image, final int imageIdx, final int annotationIndex, final int imageAnnotation) {
    ModuloAnnotation annotation = new ModuloAnnotation();
    annotation.setModulo(meta, modulo);
    String id = MetadataTools.createLSID("Annotation", annotationIndex);
    annotation.setID(id);
    annotations.addXMLAnnotation(annotation);
    meta.setImageAnnotationRef(id, imageIdx, imageAnnotation);
    image.linkAnnotation(annotation);
}