Examples with AMatrix mikera.matrixx.AMatrix used on opensource projects

Example 6 with AMatrix

use of mikera.matrixx.AMatrix in project PhenomeScape by soulj.

the class TransitionMatrix method pageRank.

public double[] pageRank(double alpha) {
    AVector probAlpha = prob.copy();
    double eps = 0.000001;
    int iter = 0;
    AVector pi0 = Vector.of(new double[prob.length()]);
    AVector pi1 = prob.copy();
    probAlpha.multiply(alpha);
    AMatrix transitionMatrixT = transitionMatrix.getTranspose();
    while ((distance(pi0, pi1) > eps) && iter < 100000) {
        pi0 = pi1.copy();
        pi1.multiply((1 - alpha));
        pi1 = pi1.innerProduct(transitionMatrixT);
        pi1.add(probAlpha);
        iter++;
    }
    return (pi1.asDoubleArray());
}