Examples with BasicStatsFunction net.imagej.measure.BasicStatsFunction used on opensource projects

Example 1 with BasicStatsFunction

use of net.imagej.measure.BasicStatsFunction in project imagej-plugins-commands by imagej.

the class MeasurementDemo method example5.

// measuring a custom set of data using an aggregating class
private void example5() {
    Dataset ds = getTestData();
    DoubleType output = new DoubleType();
    RealImageFunction<?, DoubleType> imgFunc = mSrv.imgFunction(ds, output);
    BasicStatsFunction<DoubleType> statFunc = new BasicStatsFunction<DoubleType>(imgFunc, new DoubleType());
    PointSet region = new HyperVolumePointSet(Intervals.dimensionsAsLongArray(ds));
    BasicStats stats = new BasicStats();
    mSrv.measure(statFunc, region, stats);
    System.out.println("mean = " + stats.getXBar());
    System.out.println("var = " + stats.getS2n1());
}