Examples with EIsotopePatternChartTheme net.sf.mzmine.chartbasics.chartthemes.EIsotopePatternChartTheme used on opensource projects

Example 1 with EIsotopePatternChartTheme

use of net.sf.mzmine.chartbasics.chartthemes.EIsotopePatternChartTheme in project mzmine2 by mzmine.

the class IsotopePatternPreviewDialog method addDialogComponents.

@Override
protected void addDialogComponents() {
    super.addDialogComponents();
    pFormula = parameterSet.getParameter(IsotopePatternPreviewParameters.formula);
    pMinIntensity = parameterSet.getParameter(IsotopePatternPreviewParameters.minIntensity);
    pMergeWidth = parameterSet.getParameter(IsotopePatternPreviewParameters.mergeWidth);
    pCharge = parameterSet.getParameter(IsotopePatternPreviewParameters.charge);
    Dimension screenSize = Toolkit.getDefaultToolkit().getScreenSize();
    cmpMinIntensity = (PercentComponent) getComponentForParameter(IsotopePatternPreviewParameters.minIntensity);
    cmpMergeWidth = (DoubleComponent) getComponentForParameter(IsotopePatternPreviewParameters.mergeWidth);
    cmpCharge = (IntegerComponent) getComponentForParameter(IsotopePatternPreviewParameters.charge);
    cmpFormula = (StringComponent) getComponentForParameter(IsotopePatternPreviewParameters.formula);
    // panels
    newMainPanel = new JPanel(new BorderLayout());
    pnText = new JScrollPane();
    pnlChart = new EChartPanel(chart);
    pnSplit = new JSplitPane(JSplitPane.HORIZONTAL_SPLIT, pnlChart, pnText);
    table = new JTable();
    pnlParameters = new JPanel(new FlowLayout());
    pnlControl = new JPanel(new BorderLayout());
    pnText.setHorizontalScrollBarPolicy(JScrollPane.HORIZONTAL_SCROLLBAR_ALWAYS);
    pnText.setVerticalScrollBarPolicy(JScrollPane.VERTICAL_SCROLLBAR_ALWAYS);
    pnText.setMinimumSize(new Dimension(350, 300));
    pnlChart.setMinimumSize(new Dimension(350, 200));
    // TODO: can you do this cleaner?
    pnlChart.setPreferredSize(new Dimension((int) (screenSize.getWidth() / 3), (int) (screenSize.getHeight() / 3)));
    table.setMinimumSize(new Dimension(350, 300));
    table.setDefaultEditor(Object.class, null);
    // controls
    ttGen = new SpectraToolTipGenerator();
    theme = new EIsotopePatternChartTheme();
    theme.initialize();
    // reorganize
    getContentPane().remove(mainPanel);
    organizeParameterPanel();
    pnlControl.add(pnlParameters, BorderLayout.CENTER);
    pnlControl.add(pnlButtons, BorderLayout.SOUTH);
    newMainPanel.add(pnSplit, BorderLayout.CENTER);
    newMainPanel.add(pnlControl, BorderLayout.SOUTH);
    getContentPane().add(newMainPanel);
    pnlButtons.remove(super.btnCancel);
    chart = ChartFactory.createXYBarChart("Isotope pattern preview", "m/z", false, "Abundance", new XYSeriesCollection(new XYSeries("")));
    pnlChart.setChart(chart);
    pnText.setViewportView(table);
    updateMinimumSize();
    pack();
}