Examples with RowVsRowScoreGC net.sf.mzmine.modules.peaklistmethods.alignment.hierarchical.RowVsRowScoreGC used on opensource projects

Example 1 with RowVsRowScoreGC

use of net.sf.mzmine.modules.peaklistmethods.alignment.hierarchical.RowVsRowScoreGC in project mzmine2 by mzmine.

the class RowVsRowDistanceProvider method getScore.

public RowVsRowScoreGC getScore(int row_id, int aligned_row_id, double mzMaxDiff, double rtMaxDiff) {
    PeakListRow peakListRow = full_rows_list.get(row_id);
    PeakListRow alignedRow = full_rows_list.get(aligned_row_id);
    RowVsRowScoreGC score = new // useOldestRDFancestor,
    RowVsRowScoreGC(// useOldestRDFancestor,
    project, // ,
    peakListRow, // ,
    alignedRow, // ,
    mzMaxDiff, // ,
    mzWeight, // ,
    rtMaxDiff, // ,
    rtWeight, // ,
    0.0d);
    return score;
}