Examples with DataPointProcessingController net.sf.mzmine.modules.visualization.spectra.simplespectra.datapointprocessing.DataPointProcessingController used on opensource projects

Example 1 with DataPointProcessingController

use of net.sf.mzmine.modules.visualization.spectra.simplespectra.datapointprocessing.DataPointProcessingController in project mzmine2 by mzmine.

the class SpectraPlot method checkAndRunController.

/**
 * Checks if the spectra processing is enabled & allowed and executes the controller if it is.
 * Processing is forbidden for instances of ParameterSetupDialogWithScanPreviews
 */
public void checkAndRunController() {
    // if controller != null, processing on the current spectra has already been executed. When
    // loading a new spectrum, the controller is set to null in removeAllDataSets()
    DataPointProcessingManager inst = DataPointProcessingManager.getInst();
    if (!isProcessingAllowed() || !inst.isEnabled())
        return;
    if (controller != null)
        controller = null;
    // if a controller is re-run then delete previous results
    removeDataPointProcessingResultDataSets();
    // if enabled, do the data point processing as set up by the user
    XYDataset dataSet = getMainScanDataSet();
    if (dataSet instanceof ScanDataSet) {
        Scan scan = ((ScanDataSet) dataSet).getScan();
        MSLevel mslevel = inst.decideMSLevel(scan);
        controller = new DataPointProcessingController(inst.getProcessingQueue(mslevel), this, getMainScanDataSet().getDataPoints());
        inst.addController(controller);
    }
}