Examples with JDBCatalogue nl.uva.cs.lobcder.catalogue.JDBCatalogue used on opensource projects

Example 1 with JDBCatalogue

use of nl.uva.cs.lobcder.catalogue.JDBCatalogue in project lobcder by skoulouzis.

the class Archive method getZip.

/**
 * Generates a zip archive of folder
 *
 * @param path the folder name
 * @return the stream of the archive
 */
@GET
@Path("/getzip/{name:.+}")
public Response getZip(@PathParam("name") String path) {
    class Folder {

        private String path;

        private LogicalData logicalData;

        private Folder(String path, LogicalData logicalData) {
            this.path = path;
            this.logicalData = logicalData;
        }

        /**
         * @return the path
         */
        public String getPath() {
            return path;
        }

        /**
         * @param path the path to set
         */
        public void setPath(String path) {
            this.path = path;
        }

        /**
         * @return the logicalData
         */
        public LogicalData getLogicalData() {
            return logicalData;
        }

        /**
         * @param logicalData the logicalData to set
         */
        public void setLogicalData(LogicalData logicalData) {
            this.logicalData = logicalData;
        }
    }
    final String rootPath;
    if (path.endsWith("/")) {
        rootPath = path.substring(0, path.length() - 1);
    } else {
        rootPath = path;
    }
    int index = rootPath.lastIndexOf('/');
    final String rootName;
    if (index != -1) {
        rootName = rootPath.substring(index + 1);
    } else {
        rootName = rootPath;
    }
    if (rootName.isEmpty()) {
        throw new WebApplicationException(Response.Status.NOT_ACCEPTABLE);
    }
    final MyPrincipal principal = (MyPrincipal) request.getAttribute("myprincipal");
    final JDBCatalogue catalogue = getCatalogue();
    StreamingOutput result = new StreamingOutput() {

        @Override
        public void write(OutputStream out) throws IOException, WebApplicationException {
            Stack<Folder> folders;
            try (Connection connection = catalogue.getConnection()) {
                LogicalData rootElement = catalogue.getLogicalDataByPath(io.milton.common.Path.path(rootPath), connection);
                if (rootElement == null) {
                    throw new WebApplicationException(Response.Status.NOT_FOUND);
                }
                try (ZipOutputStream zip = new ZipOutputStream(out)) {
                    ZipEntry ze;
                    folders = new Stack<>();
                    Permissions p = catalogue.getPermissions(rootElement.getUid(), rootElement.getOwner(), connection);
                    if (principal.canRead(p)) {
                        if (rootElement.isFolder()) {
                            folders.add(new Folder(rootName, rootElement));
                        } else {
                            ze = new ZipEntry(rootName);
                            zip.putNextEntry(ze);
                            List<PDRIDescr> pdris = catalogue.getPdriDescrByGroupId(rootElement.getPdriGroupId());
                            copyStream(pdris, zip);
                            zip.closeEntry();
                            getCatalogue().addViewForRes(rootElement.getUid());
                        }
                    }
                    while (!folders.isEmpty()) {
                        Folder folder = folders.pop();
                        ze = new ZipEntry(folder.getPath() + "/");
                        ze.setTime(folder.getLogicalData().getModifiedDate());
                        zip.putNextEntry(ze);
                        getCatalogue().addViewForRes(folder.getLogicalData().getUid());
                        for (LogicalData ld : catalogue.getChildrenByParentRef(folder.getLogicalData().getUid(), connection)) {
                            Permissions entry_p = catalogue.getPermissions(ld.getUid(), ld.getOwner(), connection);
                            if (principal.canRead(entry_p)) {
                                if (ld.isFolder()) {
                                    folders.push(new Folder(folder.getPath() + "/" + ld.getName(), ld));
                                } else {
                                    ze = new ZipEntry(folder.getPath() + "/" + ld.getName());
                                    ze.setTime(ld.getModifiedDate());
                                    zip.putNextEntry(ze);
                                    copyStream(catalogue.getPdriDescrByGroupId(ld.getPdriGroupId()), zip);
                                    zip.closeEntry();
                                    getCatalogue().addViewForRes(ld.getUid());
                                }
                            }
                        }
                    }
                }
            } catch (Exception e) {
                if (e instanceof WebApplicationException) {
                    throw (WebApplicationException) e;
                } else {
                    throw new WebApplicationException(Response.Status.INTERNAL_SERVER_ERROR);
                }
            }
        }
    };
    Response.ResponseBuilder response = Response.ok(result, "application/zip");
    return response.header("Content-Disposition", "attachment; filename=" + rootName + ".zip").build();
}

Example 2 with JDBCatalogue

use of nl.uva.cs.lobcder.catalogue.JDBCatalogue in project lobcder by skoulouzis.

the class RegisterSRMSites method initVFS.

private static void initVFS() throws VlException, MalformedURLException, NamingException, Exception {
    vfsClient = new VFSClient();
    VRSContext context = vfsClient.getVRSContext();
    BdiiService bdii = context.getBdiiService();
    srms = bdii.getSRMv22SAsforVO("biomed");
    // 
    debug("srms: " + context.getConfigManager().getBdiiHost());
    for (StorageArea inf : srms) {
        debug("srms: " + inf.getVOStorageLocation());
    }
    JDBCatalogue cat = new JDBCatalogue();
    String resourceURI = "";
    Credential credentials = new Credential();
// cat.registerStorageSite(resourceURI, credentials, -1, -1, -1, -1, null);
}