Examples with DiscrepancyNoteBean org.akaza.openclinica.bean.managestudy.DiscrepancyNoteBean used on opensource projects

Example 46 with DiscrepancyNoteBean

use of org.akaza.openclinica.bean.managestudy.DiscrepancyNoteBean in project OpenClinica by OpenClinica.

the class ListDiscNotesForCRFTableFactory method setDataAndLimitVariables.

@SuppressWarnings("unchecked")
@Override
public void setDataAndLimitVariables(TableFacade tableFacade) {
    Limit limit = tableFacade.getLimit();
    ListDiscNotesForCRFFilter listDiscNotesForCRF = getListEventsForSubjectFilter(limit);
    listDiscNotesForCRF.addFilter("dn.discrepancy_note_type_id", this.discNoteType);
    StringBuffer constraints = new StringBuffer();
    if (this.discNoteType > 0 && this.discNoteType < 10) {
        constraints.append(" and dn.discrepancy_note_type_id=" + this.discNoteType);
    }
    if (this.resolutionStatusIds != null && this.resolutionStatusIds.size() > 0) {
        String s = " and (";
        for (Integer resolutionStatusId : this.resolutionStatusIds) {
            s += "dn.resolution_status_id = " + resolutionStatusId + " or ";
        }
        s = s.substring(0, s.length() - 3) + " )";
        listDiscNotesForCRF.addFilter("dn.resolution_status_id", s);
        constraints.append(s);
    }
    if (!limit.isComplete()) {
        int totalRows = getStudySubjectDAO().getCountWithFilter(listDiscNotesForCRF, getStudyBean());
        tableFacade.setTotalRows(totalRows);
    }
    ListDiscNotesForCRFSort eventsForSubjectSort = getListEventsForSubjectSort(limit);
    int rowStart = limit.getRowSelect().getRowStart();
    int rowEnd = limit.getRowSelect().getRowEnd();
    Collection<StudySubjectBean> items = getStudySubjectDAO().getWithFilterAndSort(getStudyBean(), listDiscNotesForCRF, eventsForSubjectSort, rowStart, rowEnd);
    Collection<HashMap<Object, Object>> theItems = new ArrayList<HashMap<Object, Object>>();
    boolean hasDN = false;
    for (StudySubjectBean studySubjectBean : items) {
        HashMap<Object, Object> theItem = new HashMap<Object, Object>();
        theItem.put("studySubject", studySubjectBean);
        theItem.put("studySubject.label", studySubjectBean.getLabel());
        theItem.put("studySubject.status", studySubjectBean.getStatus());
        SubjectBean subjectBean = (SubjectBean) getSubjectDAO().findByPK(studySubjectBean.getSubjectId());
        theItem.put("subject", subjectBean);
        theItem.put("subject.charGender", subjectBean.getGender());
        // Get EventCrfs for study Subject
        List<EventCRFBean> eventCrfs = getEventCRFDAO().findAllByStudySubject(studySubjectBean.getId());
        HashMap<String, EventCRFBean> crfAsKeyEventCrfAsValue = new HashMap<String, EventCRFBean>();
        for (EventCRFBean eventCRFBean : eventCrfs) {
            CRFBean crf = getCrfDAO().findByVersionId(eventCRFBean.getCRFVersionId());
            crfAsKeyEventCrfAsValue.put(crf.getId() + "_" + eventCRFBean.getStudyEventId(), eventCRFBean);
        }
        // Get the event Status
        List<StudyEventBean> eventsForStudySubjectAndEventDefinitions = getStudyEventDAO().findAllByDefinitionAndSubject(selectedStudyEventDefinition, studySubjectBean);
        List<DisplayBean> events = new ArrayList<DisplayBean>();
        // study event size < 1
        if (eventsForStudySubjectAndEventDefinitions.size() < 1) {
            DisplayBean d = new DisplayBean();
            d.getProps().put("event", null);
            d.getProps().put("event.status", SubjectEventStatus.NOT_SCHEDULED);
            d.getProps().put("event.startDate", null);
            for (int i = 0; i < getCrfs(selectedStudyEventDefinition).size(); i++) {
                CRFBean crf = getCrfs(selectedStudyEventDefinition).get(i);
                HashMap<ResolutionStatus, Integer> discCounts = new HashMap<ResolutionStatus, Integer>();
                d.getProps().put("crf_" + crf.getId(), DataEntryStage.UNCOMPLETED);
                d.getProps().put("crf_" + crf.getId() + "_eventCrf", null);
                d.getProps().put("crf_" + crf.getId() + "_crf", crf);
                d.getProps().put("crf_" + crf.getId() + "_eventDefinitionCrf", eventDefinitionCrfs.get(i));
                d.getProps().put("crf_" + crf.getId() + "_discCounts", discCounts);
                theItem.put("crf_" + crf.getId(), "");
            }
            events.add(d);
        }
        // study event size >0
        for (StudyEventBean studyEventBean : eventsForStudySubjectAndEventDefinitions) {
            DisplayBean d = new DisplayBean();
            d.getProps().put("event", studyEventBean);
            d.getProps().put("event.status", studyEventBean.getSubjectEventStatus());
            d.getProps().put("event.startDate", studyEventBean.getCreatedDate());
            for (int i = 0; i < getCrfs(selectedStudyEventDefinition).size(); i++) {
                CRFBean crf = getCrfs(selectedStudyEventDefinition).get(i);
                EventCRFBean eventCRFBean = crfAsKeyEventCrfAsValue.get(crf.getId() + "_" + studyEventBean.getId());
                HashMap<ResolutionStatus, Integer> discCounts = new HashMap<ResolutionStatus, Integer>();
                if (eventCRFBean != null) {
                    d.getProps().put("crf_" + crf.getId(), eventCRFBean.getStage());
                    d.getProps().put("crf_" + crf.getId() + "_eventCrf", eventCRFBean);
                    // List<DiscrepancyNoteBean> discs =
                    // getDiscrepancyNoteDAO().findAllByStudyEvent(studyEventBean);
                    List<DiscrepancyNoteBean> discs = getDiscrepancyNoteDAO().findAllParentItemNotesByEventCRFWithConstraints(eventCRFBean.getId(), constraints);
                    hasDN = hasDN == false ? discs != null && discs.size() > 0 : hasDN;
                    for (DiscrepancyNoteBean discrepancyNoteBean : discs) {
                        Integer value = discCounts.get(discrepancyNoteBean.getResStatus());
                        if (value != null) {
                            discCounts.put(discrepancyNoteBean.getResStatus(), ++value);
                        } else {
                            discCounts.put(discrepancyNoteBean.getResStatus(), 1);
                        }
                    }
                    d.getProps().put("crf_" + crf.getId() + "_discCounts", discCounts);
                } else {
                    d.getProps().put("crf_" + crf.getId(), DataEntryStage.UNCOMPLETED);
                    d.getProps().put("crf_" + crf.getId() + "_eventCrf", null);
                    d.getProps().put("crf_" + crf.getId() + "_discCounts", discCounts);
                }
                d.getProps().put("crf_" + crf.getId() + "_crf", crf);
                d.getProps().put("crf_" + crf.getId() + "_eventDefinitionCrf", eventDefinitionCrfs.get(i));
                theItem.put("crf_" + crf.getId(), "");
            }
            events.add(d);
        }
        theItem.put("events", events);
        theItem.put("event.status", "");
        theItem.put("event.startDate", "");
        theItems.add(theItem);
    }
    // Do not forget to set the items back on the tableFacade.
    tableFacade.setItems(theItems);
    this.setStudyHasDiscNotes(hasDN);
}

Example 47 with DiscrepancyNoteBean

use of org.akaza.openclinica.bean.managestudy.DiscrepancyNoteBean in project OpenClinica by OpenClinica.

the class ListNotesTableFactory method setDataAndLimitVariables.

@Override
public void setDataAndLimitVariables(TableFacade tableFacade) {
    // initialize i18n
    resword = ResourceBundleProvider.getWordsBundle(getLocale());
    resformat = ResourceBundleProvider.getFormatBundle(getLocale());
    int parentStudyId = 0;
    Limit limit = tableFacade.getLimit();
    if (!limit.isComplete()) {
        parentStudyId = currentStudy.getId();
        //Build row count of various DN types
        int totalRows = getDiscrepancyNoteDao().getSubjectDNCountWithFilter(getListNoteFilter(limit), parentStudyId);
        totalRows += getDiscrepancyNoteDao().getStudySubjectDNCountWithFilter(getListNoteFilter(limit), parentStudyId);
        totalRows += getDiscrepancyNoteDao().getStudyEventDNCountWithFilter(getListNoteFilter(limit), parentStudyId);
        totalRows += getDiscrepancyNoteDao().getEventCrfDNCountWithFilter(getListNoteFilter(limit), parentStudyId);
        totalRows += getDiscrepancyNoteDao().getItemDataDNCountWithFilter(getListNoteFilter(limit), parentStudyId);
        tableFacade.setTotalRows(totalRows);
    }
    ViewNotesFilterCriteria filter = ViewNotesFilterCriteria.buildFilterCriteria(limit, getDateFormat(), discrepancyNoteTypeDropdown.getDecoder(), resolutionStatusDropdown.getDecoder());
    notesSummary = getViewNotesService().calculateNotesSummary(getCurrentStudy(), filter);
    int pageSize = limit.getRowSelect().getMaxRows();
    int firstRecordShown = (limit.getRowSelect().getPage() - 1) * pageSize;
    if (firstRecordShown > notesSummary.getTotal() && notesSummary.getTotal() != 0) {
        // The page selected goes beyond the dataset size
        // Move to the last page
        limit.getRowSelect().setPage((int) Math.ceil((double) notesSummary.getTotal() / pageSize));
        filter = ViewNotesFilterCriteria.buildFilterCriteria(limit, getDateFormat(), discrepancyNoteTypeDropdown.getDecoder(), resolutionStatusDropdown.getDecoder());
    }
    List<DiscrepancyNoteBean> items = getViewNotesService().listNotes(getCurrentStudy(), filter, ViewNotesSortCriteria.buildFilterCriteria(limit.getSortSet()));
    this.setAllNotes(items);
    Collection<HashMap<Object, Object>> theItems = new ArrayList<HashMap<Object, Object>>();
    for (DiscrepancyNoteBean discrepancyNoteBean : items) {
        HashMap<Object, Object> h = new HashMap<Object, Object>();
        h.put("studySubject", discrepancyNoteBean.getStudySub());
        h.put("studySubject.label", discrepancyNoteBean.getStudySub().getLabel());
        h.put("discrepancyNoteBean.disType", discrepancyNoteBean.getDisType());
        h.put("discrepancyNoteBean.resolutionStatus", discrepancyNoteBean.getResStatus());
        h.put("age", discrepancyNoteBean.getAge());
        h.put("days", discrepancyNoteBean.getDays());
        h.put("siteId", discrepancyNoteBean.getSiteId());
        h.put("discrepancyNoteBean", discrepancyNoteBean);
        h.put("discrepancyNoteBean.createdDate", discrepancyNoteBean.getCreatedDate());
        h.put("discrepancyNoteBean.updatedDate", discrepancyNoteBean.getUpdatedDate());
        h.put("eventName", discrepancyNoteBean.getEventName());
        h.put("eventStartDate", discrepancyNoteBean.getEventStart());
        h.put("crfName", discrepancyNoteBean.getCrfName());
        h.put("crfStatus", discrepancyNoteBean.getCrfStatus());
        h.put("entityName", discrepancyNoteBean.getEntityName());
        h.put("entityValue", discrepancyNoteBean.getEntityValue());
        h.put("discrepancyNoteBean", discrepancyNoteBean);
        h.put("discrepancyNoteBean.description", discrepancyNoteBean.getDescription());
        h.put("discrepancyNoteBean.detailedNotes", discrepancyNoteBean.getDetailedNotes());
        h.put("numberOfNotes", discrepancyNoteBean.getNumChildren());
        h.put("discrepancyNoteBean.user", discrepancyNoteBean.getAssignedUser());
        h.put("discrepancyNoteBean.entityType", discrepancyNoteBean.getEntityType());
        h.put("discrepancyNoteBean.owner", discrepancyNoteBean.getOwner());
        theItems.add(h);
        setStudyHasDiscNotes(true);
    }
    tableFacade.setItems(theItems);
}

Example 48 with DiscrepancyNoteBean

use of org.akaza.openclinica.bean.managestudy.DiscrepancyNoteBean in project OpenClinica by OpenClinica.

the class ViewDiscrepancyNoteServlet method processRequest.

@Override
@SuppressWarnings("unchecked")
protected void processRequest() throws Exception {
    FormProcessor fp = new FormProcessor(request);
    int eventCRFId = fp.getInt(CreateDiscrepancyNoteServlet.EVENT_CRF_ID);
    request.setAttribute(CreateDiscrepancyNoteServlet.EVENT_CRF_ID, new Integer(eventCRFId));
    request.setAttribute(DIS_TYPES, DiscrepancyNoteType.list);
    if (currentRole.getRole().equals(Role.RESEARCHASSISTANT) || currentRole.getRole().equals(Role.RESEARCHASSISTANT2) || currentRole.getRole().equals(Role.INVESTIGATOR)) {
        ArrayList<ResolutionStatus> resStatuses = new ArrayList();
        resStatuses.add(ResolutionStatus.UPDATED);
        resStatuses.add(ResolutionStatus.RESOLVED);
        request.setAttribute(RES_STATUSES, resStatuses);
        // it's for parentDNId is null or 0
        request.setAttribute(WHICH_RES_STATUSES, "22");
        ArrayList<ResolutionStatus> resStatuses2 = new ArrayList<ResolutionStatus>();
        resStatuses2.add(ResolutionStatus.OPEN);
        resStatuses2.add(ResolutionStatus.RESOLVED);
        request.setAttribute(RES_STATUSES2, resStatuses2);
        List<DiscrepancyNoteType> types2 = new ArrayList<DiscrepancyNoteType>(DiscrepancyNoteType.list);
        types2.remove(DiscrepancyNoteType.QUERY);
        request.setAttribute(DIS_TYPES2, types2);
    } else if (currentRole.getRole().equals(Role.MONITOR)) {
        ArrayList<ResolutionStatus> resStatuses = new ArrayList();
        resStatuses.add(ResolutionStatus.OPEN);
        resStatuses.add(ResolutionStatus.UPDATED);
        resStatuses.add(ResolutionStatus.CLOSED);
        request.setAttribute(RES_STATUSES, resStatuses);
        request.setAttribute(WHICH_RES_STATUSES, "1");
        ArrayList<DiscrepancyNoteType> types2 = new ArrayList<DiscrepancyNoteType>();
        types2.add(DiscrepancyNoteType.QUERY);
        request.setAttribute(DIS_TYPES2, types2);
    } else {
        // Role.STUDYDIRECTOR Role.COORDINATOR
        List<ResolutionStatus> resStatuses = new ArrayList<ResolutionStatus>(ResolutionStatus.list);
        resStatuses.remove(ResolutionStatus.NOT_APPLICABLE);
        request.setAttribute(RES_STATUSES, resStatuses);
        ;
        // it's for parentDNId is null or 0 and FVC
        request.setAttribute(WHICH_RES_STATUSES, "2");
        ArrayList<ResolutionStatus> resStatuses2 = new ArrayList<ResolutionStatus>();
        resStatuses2.add(ResolutionStatus.OPEN);
        resStatuses2.add(ResolutionStatus.RESOLVED);
        request.setAttribute(RES_STATUSES2, resStatuses2);
    }
    // logic from CreateDiscrepancyNoteServlet
    request.setAttribute("unlock", "0");
    fp.getBoolean(IS_REASON_FOR_CHANGE);
    fp.getBoolean(ERROR_FLAG);
    String monitor = fp.getString("monitor");
    // } else if ("1".equalsIgnoreCase(monitor)) {// change to allow user to
    if ("1".equalsIgnoreCase(monitor)) {
        // change to allow user to
        // enter note for all items,
        // not just blank items
        request.setAttribute(CAN_MONITOR, "1");
        request.setAttribute("monitor", monitor);
    } else {
        request.setAttribute(CAN_MONITOR, "0");
    }
    Boolean fromBox = fp.getBoolean(FROM_BOX);
    if (fromBox == null || !fromBox) {
        session.removeAttribute(BOX_TO_SHOW);
        session.removeAttribute(BOX_DN_MAP);
        session.removeAttribute(AUTOVIEWS);
    }
    Boolean refresh = fp.getBoolean("refresh");
    request.setAttribute("refresh", refresh + "");
    String ypos = fp.getString("y");
    if (ypos == null || ypos.length() == 0) {
        ypos = "0";
    }
    request.setAttribute("y", ypos);
    DiscrepancyNoteDAO dndao = new DiscrepancyNoteDAO(sm.getDataSource());
    int entityId = fp.getInt(ENTITY_ID, true);
    String name = fp.getString(ENTITY_TYPE, true);
    String column = fp.getString(ENTITY_COLUMN, true);
    String field = fp.getString(ENTITY_FIELD, true);
    String isLocked = fp.getString(LOCKED_FLAG);
    if (!StringUtil.isBlank(isLocked) && "yes".equalsIgnoreCase(isLocked)) {
        request.setAttribute(LOCKED_FLAG, "yes");
    } else {
        request.setAttribute(LOCKED_FLAG, "no");
    }
    DateFormat dateFormatter = DateFormat.getDateInstance(DateFormat.DEFAULT, locale);
    int subjectId = fp.getInt(CreateDiscrepancyNoteServlet.SUBJECT_ID, true);
    int itemId = fp.getInt(CreateDiscrepancyNoteServlet.ITEM_ID, true);
    StudySubjectBean ssub = new StudySubjectBean();
    if (subjectId > 0) {
        StudySubjectDAO ssdao = new StudySubjectDAO(sm.getDataSource());
        ssub = (StudySubjectBean) ssdao.findByPK(subjectId);
        request.setAttribute("noteSubject", ssub);
    }
    ItemBean item = new ItemBean();
    if (itemId > 0) {
        ItemDAO idao = new ItemDAO(sm.getDataSource());
        item = (ItemBean) idao.findByPK(itemId);
        request.setAttribute("item", item);
        request.setAttribute("entityName", item.getName());
    }
    ItemDataBean itemData = new ItemDataBean();
    SimpleDateFormat sdf = new SimpleDateFormat("dd-MMM-yyyy");
    int preUserId = 0;
    if (!StringUtil.isBlank(name)) {
        if ("itemData".equalsIgnoreCase(name)) {
            ItemDataDAO iddao = new ItemDataDAO(sm.getDataSource());
            itemData = (ItemDataBean) iddao.findByPK(entityId);
            request.setAttribute("entityValue", itemData.getValue());
            request.setAttribute("entityName", item.getName());
            EventCRFDAO ecdao = new EventCRFDAO(sm.getDataSource());
            EventCRFBean ec = (EventCRFBean) ecdao.findByPK(itemData.getEventCRFId());
            preUserId = ec.getOwnerId() > 0 ? ec.getOwnerId() : 0;
            request.setAttribute("entityCreatedDate", sdf.format(ec.getCreatedDate()));
            StudyEventDAO sed = new StudyEventDAO(sm.getDataSource());
            StudyEventBean se = (StudyEventBean) sed.findByPK(ec.getStudyEventId());
            StudyEventDefinitionDAO seddao = new StudyEventDefinitionDAO(sm.getDataSource());
            StudyEventDefinitionBean sedb = (StudyEventDefinitionBean) seddao.findByPK(se.getStudyEventDefinitionId());
            se.setName(sedb.getName());
            request.setAttribute("studyEvent", se);
            CRFVersionDAO cvdao = new CRFVersionDAO(sm.getDataSource());
            CRFVersionBean cv = (CRFVersionBean) cvdao.findByPK(ec.getCRFVersionId());
            CRFDAO cdao = new CRFDAO(sm.getDataSource());
            CRFBean crf = (CRFBean) cdao.findByPK(cv.getCrfId());
            request.setAttribute("crf", crf);
        } else if ("studySub".equalsIgnoreCase(name)) {
            StudySubjectDAO ssdao = new StudySubjectDAO(sm.getDataSource());
            ssub = (StudySubjectBean) ssdao.findByPK(entityId);
            SubjectDAO sdao = new SubjectDAO(sm.getDataSource());
            SubjectBean sub = (SubjectBean) sdao.findByPK(ssub.getSubjectId());
            request.setAttribute("noteSubject", ssub);
            if (!StringUtil.isBlank(column)) {
                if ("enrollment_date".equalsIgnoreCase(column)) {
                    if (ssub.getEnrollmentDate() != null) {
                        request.setAttribute("entityValue", dateFormatter.format(ssub.getEnrollmentDate()));
                    }
                    request.setAttribute("entityName", resword.getString("enrollment_date"));
                } else if ("gender".equalsIgnoreCase(column)) {
                    request.setAttribute("entityValue", sub.getGender() + "");
                    request.setAttribute("entityName", resword.getString("gender"));
                } else if ("date_of_birth".equalsIgnoreCase(column)) {
                    if (sub.getDateOfBirth() != null) {
                        request.setAttribute("entityValue", dateFormatter.format(sub.getDateOfBirth()));
                    }
                    request.setAttribute("entityName", resword.getString("date_of_birth"));
                } else if ("unique_identifier".equalsIgnoreCase(column)) {
                    if (sub.getUniqueIdentifier() != null) {
                        request.setAttribute("entityValue", sub.getUniqueIdentifier());
                    }
                    request.setAttribute("entityName", resword.getString("unique_identifier"));
                }
            }
            preUserId = ssub.getOwnerId() > 0 ? ssub.getOwnerId() : 0;
            request.setAttribute("entityCreatedDate", sdf.format(ssub.getCreatedDate()));
        } else if ("subject".equalsIgnoreCase(name)) {
            SubjectDAO sdao = new SubjectDAO(sm.getDataSource());
            SubjectBean sub = (SubjectBean) sdao.findByPK(entityId);
            // be caution: here for subject, noteSubject is SubjectBean and
            // label is unique_identifier
            sub.setLabel(sub.getUniqueIdentifier());
            request.setAttribute("noteSubject", sub);
            if (!StringUtil.isBlank(column)) {
                if ("gender".equalsIgnoreCase(column)) {
                    request.setAttribute("entityValue", ssub.getGender() + "");
                    request.setAttribute("entityName", resword.getString("gender"));
                } else if ("date_of_birth".equalsIgnoreCase(column)) {
                    if (sub.getDateOfBirth() != null) {
                        request.setAttribute("entityValue", dateFormatter.format(sub.getDateOfBirth()));
                    }
                    request.setAttribute("entityName", resword.getString("date_of_birth"));
                } else if ("unique_identifier".equalsIgnoreCase(column)) {
                    request.setAttribute("entityValue", sub.getUniqueIdentifier());
                    request.setAttribute("entityName", resword.getString("unique_identifier"));
                }
            }
            preUserId = sub.getOwnerId() > 0 ? sub.getOwnerId() : 0;
            request.setAttribute("entityCreatedDate", sdf.format(sub.getCreatedDate()));
        } else if ("studyEvent".equalsIgnoreCase(name)) {
            StudyEventDAO sed = new StudyEventDAO(sm.getDataSource());
            StudyEventBean se = (StudyEventBean) sed.findByPK(entityId);
            StudyEventDefinitionDAO seddao = new StudyEventDefinitionDAO(sm.getDataSource());
            StudyEventDefinitionBean sedb = (StudyEventDefinitionBean) seddao.findByPK(se.getStudyEventDefinitionId());
            se.setName(sedb.getName());
            request.setAttribute("studyEvent", se);
            request.setAttribute("noteSubject", new StudySubjectDAO(sm.getDataSource()).findByPK(se.getStudySubjectId()));
            if (!StringUtil.isBlank(column)) {
                if ("location".equalsIgnoreCase(column)) {
                    request.setAttribute("entityValue", se.getLocation());
                    request.setAttribute("entityName", resword.getString("location"));
                } else if ("start_date".equalsIgnoreCase(column)) {
                    if (se.getDateStarted() != null) {
                        request.setAttribute("entityValue", dateFormatter.format(se.getDateStarted()));
                    }
                    request.setAttribute("entityName", resword.getString("start_date"));
                } else if ("end_date".equalsIgnoreCase(column)) {
                    if (se.getDateEnded() != null) {
                        request.setAttribute("entityValue", dateFormatter.format(se.getDateEnded()));
                    }
                    request.setAttribute("entityName", resword.getString("end_date"));
                }
            }
            preUserId = se.getOwnerId() > 0 ? se.getOwnerId() : 0;
            request.setAttribute("entityCreatedDate", sdf.format(se.getCreatedDate()));
        } else if ("eventCrf".equalsIgnoreCase(name)) {
            EventCRFDAO ecdao = new EventCRFDAO(sm.getDataSource());
            EventCRFBean ec = (EventCRFBean) ecdao.findByPK(entityId);
            if (!StringUtil.isBlank(column)) {
                if ("date_interviewed".equals(column)) {
                    if (ec.getDateInterviewed() != null) {
                        request.setAttribute("entityValue", dateFormatter.format(ec.getDateInterviewed()));
                    }
                    request.setAttribute("entityName", resword.getString("date_interviewed"));
                } else if ("interviewer_name".equals(column)) {
                    request.setAttribute("entityValue", ec.getInterviewerName());
                    request.setAttribute("entityName", resword.getString("interviewer_name"));
                }
            }
            setupStudyEventCRFAttributes(ec);
            preUserId = ec.getOwnerId() > 0 ? ec.getOwnerId() : 0;
            request.setAttribute("entityCreatedDate", sdf.format(ec.getCreatedDate()));
        }
    }
    boolean writeToDB = fp.getBoolean(CreateDiscrepancyNoteServlet.WRITE_TO_DB, true);
    HashMap<Integer, Integer> autoviews = (HashMap<Integer, Integer>) session.getAttribute(AUTOVIEWS);
    autoviews = autoviews == null ? new HashMap<Integer, Integer>() : autoviews;
    HashMap<Integer, DiscrepancyNoteBean> boxDNMap = (HashMap<Integer, DiscrepancyNoteBean>) session.getAttribute(BOX_DN_MAP);
    if (boxDNMap == null || !boxDNMap.containsKey(0)) {
        boxDNMap = new HashMap<Integer, DiscrepancyNoteBean>();
        // initialize dn for a new thread
        DiscrepancyNoteBean dnb = new DiscrepancyNoteBean();
        if (currentRole.getRole().equals(Role.RESEARCHASSISTANT) || currentRole.getRole().equals(Role.RESEARCHASSISTANT2) || currentRole.getRole().equals(Role.INVESTIGATOR)) {
            dnb.setDiscrepancyNoteTypeId(DiscrepancyNoteType.ANNOTATION.getId());
            dnb.setResolutionStatusId(ResolutionStatus.NOT_APPLICABLE.getId());
            autoviews.put(0, 0);
        // request.setAttribute("autoView", "0");
        } else {
            dnb.setDiscrepancyNoteTypeId(DiscrepancyNoteType.QUERY.getId());
            dnb.setAssignedUserId(preUserId);
            autoviews.put(0, 1);
        // request.setAttribute("autoView", "1");
        }
        boxDNMap.put(0, dnb);
    } else if (boxDNMap.containsKey(0)) {
        int dnTypeId = boxDNMap.get(0).getDiscrepancyNoteTypeId();
        autoviews.put(0, dnTypeId == 3 ? 1 : 0);
    }
    if (boxDNMap.containsKey(0)) {
        int dnTypeId0 = boxDNMap.get(0).getDiscrepancyNoteTypeId();
        if (dnTypeId0 == 2 || dnTypeId0 == 4) {
            request.setAttribute("typeID0", dnTypeId0 + "");
        }
    }
    // request.setAttribute("enterData", enterData);
    request.setAttribute("monitor", monitor);
    request.setAttribute(ENTITY_ID, entityId + "");
    request.setAttribute(ENTITY_TYPE, name);
    request.setAttribute(ENTITY_FIELD, field);
    request.setAttribute(ENTITY_COLUMN, column);
    request.setAttribute(CreateDiscrepancyNoteServlet.WRITE_TO_DB, writeToDB ? "1" : "0");
    ArrayList notes = (ArrayList) dndao.findAllByEntityAndColumn(name, entityId, column);
    if (notes.size() > 0) {
        notes.get(0);
        // @pgawade 21-May-2011 Corrected the condition to throw no access
        // error
        StudyDAO studyDAO = new StudyDAO(sm.getDataSource());
        int parentStudyForNoteSub = 0;
        // @pgawade #9801: 07-June-2011 corrected the way to get study
        // subject id associated with discrepancy note
        // int noteSubId = note.getOwnerId();
        StudySubjectDAO ssdao = new StudySubjectDAO(sm.getDataSource());
        // StudySubjectBean notessub = (StudySubjectBean)
        // ssdao.findByPK(noteSubId);
        StudySubjectBean notessub = (StudySubjectBean) ssdao.findByPK(subjectId);
        StudyBean studyBeanSub = (StudyBean) studyDAO.findByPK(notessub.getStudyId());
        if (null != studyBeanSub) {
            parentStudyForNoteSub = studyBeanSub.getParentStudyId();
        }
        if (notessub.getStudyId() != currentStudy.getId() && currentStudy.getId() != parentStudyForNoteSub) {
            addPageMessage(noAccessMessage);
            throw new InsufficientPermissionException(Page.MENU_SERVLET, exceptionName, "1");
        }
    }
    FormDiscrepancyNotes newNotes = (FormDiscrepancyNotes) session.getAttribute(AddNewSubjectServlet.FORM_DISCREPANCY_NOTES_NAME);
    Map<Integer, DiscrepancyNoteBean> noteTree = new LinkedHashMap<Integer, DiscrepancyNoteBean>();
    String session_key = eventCRFId + "_" + field;
    ArrayList newFieldNotes = null;
    if (newNotes != null && (!newNotes.getNotes(field).isEmpty() || !newNotes.getNotes(session_key).isEmpty())) {
        newFieldNotes = newNotes.getNotes(field);
        if (newFieldNotes == null || newFieldNotes.size() == 0) {
            newFieldNotes = newNotes.getNotes(session_key);
        }
        // System.out.println("how many notes:" + newFieldNotes.size());
        for (int i = 0; i < newFieldNotes.size(); i++) {
            DiscrepancyNoteBean note = (DiscrepancyNoteBean) newFieldNotes.get(i);
            note.setLastUpdator(ub);
            note.setLastDateUpdated(new Date());
            note.setDisType(DiscrepancyNoteType.get(note.getDiscrepancyNoteTypeId()));
            note.setResStatus(ResolutionStatus.get(note.getResolutionStatusId()));
            note.setSaved(false);
            if (itemId > 0) {
                note.setEntityName(item.getName());
                note.setEntityValue(itemData.getValue());
            }
            note.setSubjectName(ssub.getName());
            note.setEntityType(name);
            int pId = note.getParentDnId();
            if (pId == 0) {
                // we can only keep one unsaved note because
                // note.id == 0
                noteTree.put(note.getId(), note);
            }
        }
        for (int i = 0; i < newFieldNotes.size(); i++) {
            DiscrepancyNoteBean note = (DiscrepancyNoteBean) newFieldNotes.get(i);
            int pId = note.getParentDnId();
            if (pId > 0) {
                note.setSaved(false);
                note.setLastUpdator(ub);
                note.setLastDateUpdated(new Date());
                note.setEntityName(item.getName());
                note.setSubjectName(ssub.getName());
                note.setEntityType(name);
                note.setDisType(DiscrepancyNoteType.get(note.getDiscrepancyNoteTypeId()));
                note.setResStatus(ResolutionStatus.get(note.getResolutionStatusId()));
                DiscrepancyNoteBean parent = noteTree.get(new Integer(pId));
                if (parent != null) {
                    parent.getChildren().add(note);
                }
            }
        }
    }
    UserAccountDAO udao = new UserAccountDAO(sm.getDataSource());
    HashMap<Integer, String> fvcInitAssigns = new HashMap<Integer, String>();
    for (int i = 0; i < notes.size(); i++) {
        DiscrepancyNoteBean note = (DiscrepancyNoteBean) notes.get(i);
        note.setColumn(column);
        note.setEntityId(entityId);
        note.setEntityType(name);
        note.setField(field);
        Date lastUpdatedDate = note.getCreatedDate();
        UserAccountBean lastUpdator = (UserAccountBean) udao.findByPK(note.getOwnerId());
        note.setLastUpdator(lastUpdator);
        note.setLastDateUpdated(lastUpdatedDate);
        int pId = note.getParentDnId();
        note.setDisType(DiscrepancyNoteType.get(note.getDiscrepancyNoteTypeId()));
        note.setResStatus(ResolutionStatus.get(note.getResolutionStatusId()));
        if (pId == 0) {
            noteTree.put(new Integer(note.getId()), note);
        }
    }
    for (int i = 0; i < notes.size(); i++) {
        DiscrepancyNoteBean note = (DiscrepancyNoteBean) notes.get(i);
        int pId = note.getParentDnId();
        if (itemId > 0) {
            note.setEntityName(item.getName());
            note.setEntityValue(itemData.getValue());
        }
        note.setSubjectName(ssub.getName());
        note.setEntityType(name);
        Date lastUpdatedDate = note.getCreatedDate();
        UserAccountBean lastUpdator = (UserAccountBean) udao.findByPK(note.getOwnerId());
        note.setLastUpdator(lastUpdator);
        note.setLastDateUpdated(lastUpdatedDate);
        note.setDisType(DiscrepancyNoteType.get(note.getDiscrepancyNoteTypeId()));
        note.setResStatus(ResolutionStatus.get(note.getResolutionStatusId()));
        if (pId > 0) {
            DiscrepancyNoteBean parent = noteTree.get(new Integer(pId));
            if (parent != null) {
                parent.getChildren().add(note);
                if (!note.getCreatedDate().before(parent.getLastDateUpdated())) {
                    parent.setLastDateUpdated(note.getCreatedDate());
                }
                if (note.getDiscrepancyNoteTypeId() == 1 && note.getAssignedUserId() > 0) {
                    int ownerId = note.getOwnerId();
                    if (fvcInitAssigns.containsKey(pId)) {
                        String f = fvcInitAssigns.get(pId);
                        String fn = note.getId() + "." + ownerId;
                        if (fn.compareTo(f) < 0) {
                            fvcInitAssigns.put(pId, fn);
                        }
                    } else {
                        fvcInitAssigns.put(pId, note.getId() + "." + ownerId);
                    }
                }
            }
        }
    }
    Set parents = noteTree.keySet();
    Iterator it = parents.iterator();
    while (it.hasNext()) {
        Integer key = (Integer) it.next();
        DiscrepancyNoteBean note = noteTree.get(key);
        note.setNumChildren(note.getChildren().size());
        note.setEntityType(name);
        if (!boxDNMap.containsKey(key)) {
            DiscrepancyNoteBean dn = new DiscrepancyNoteBean();
            dn.setId(key);
            int dnTypeId = note.getDiscrepancyNoteTypeId();
            dn.setDiscrepancyNoteTypeId(dnTypeId);
            if (dnTypeId == 3) {
                // JsonQuery
                dn.setAssignedUserId(note.getOwnerId());
            } else if (dnTypeId == 1) {
                // FVC
                if (fvcInitAssigns.containsKey(key)) {
                    String[] s = fvcInitAssigns.get(key).split("\\.");
                    int i = Integer.parseInt(s.length == 2 ? s[1].trim() : "0");
                    dn.setAssignedUserId(i);
                }
            }
            Role r = currentRole.getRole();
            // currentStudy.getId() != currentStudy.getParentStudyId()) {
            if (r.equals(Role.RESEARCHASSISTANT) || r.equals(Role.RESEARCHASSISTANT2) || r.equals(Role.INVESTIGATOR)) {
                if (dn.getDiscrepancyNoteTypeId() == DiscrepancyNoteType.QUERY.getId() && note.getResStatus().getId() == ResolutionStatus.UPDATED.getId()) {
                    dn.setResolutionStatusId(ResolutionStatus.UPDATED.getId());
                } else {
                    dn.setResolutionStatusId(ResolutionStatus.RESOLVED.getId());
                }
                if (dn.getAssignedUserId() > 0) {
                    autoviews.put(key, 1);
                } else {
                    autoviews.put(key, 0);
                }
            // copied from CreateDiscrepancyNoteServlet
            // request.setAttribute("autoView", "0");
            // hide the panel, tbh
            } else {
                if (note.getResStatus().getId() == ResolutionStatus.RESOLVED.getId()) {
                    dn.setResolutionStatusId(ResolutionStatus.CLOSED.getId());
                } else if (note.getResStatus().getId() == ResolutionStatus.CLOSED.getId()) {
                    dn.setResolutionStatusId(ResolutionStatus.UPDATED.getId());
                } else if (r.equals(Role.MONITOR)) {
                    dn.setResolutionStatusId(ResolutionStatus.UPDATED.getId());
                } else if (dn.getDiscrepancyNoteTypeId() == 1) {
                    dn.setResolutionStatusId(ResolutionStatus.RESOLVED.getId());
                } else {
                    dn.setResolutionStatusId(ResolutionStatus.UPDATED.getId());
                }
                autoviews.put(key, 1);
                if (dn.getAssignedUserId() > 0) {
                } else {
                    dn.setAssignedUserId(preUserId);
                }
            }
            boxDNMap.put(key, dn);
        }
    }
    session.setAttribute(BOX_DN_MAP, boxDNMap);
    session.setAttribute(AUTOVIEWS, autoviews);
    // noteTree is a Hashmap mapping note id to a parent note, with all the
    // child notes
    // stored in the children List.
    // BWP 3029>>make sure the parent note has an updated resolution status
    // and
    // updated date
    fixStatusUpdatedDate(noteTree);
    request.setAttribute(DIS_NOTES, noteTree);
    // copied from CreatediscrepancyNoteServlet generateUserAccounts
    StudyDAO studyDAO = new StudyDAO(sm.getDataSource());
    StudyBean subjectStudy = studyDAO.findByStudySubjectId(subjectId);
    int studyId = currentStudy.getId();
    ArrayList<UserAccountBean> userAccounts = new ArrayList();
    if (currentStudy.getParentStudyId() > 0) {
        userAccounts = udao.findAllUsersByStudyOrSite(studyId, currentStudy.getParentStudyId(), subjectId);
    } else if (subjectStudy.getParentStudyId() > 0) {
        userAccounts = udao.findAllUsersByStudyOrSite(subjectStudy.getId(), subjectStudy.getParentStudyId(), subjectId);
    } else {
        userAccounts = udao.findAllUsersByStudyOrSite(studyId, 0, subjectId);
    }
    request.setAttribute(USER_ACCOUNTS, userAccounts);
    request.setAttribute(VIEW_DN_LINK, this.getPageServletFileName());
    // audit log items (from ViewItemAuditLogServlet.java)
    AuditDAO adao = new AuditDAO(sm.getDataSource());
    if (name.equalsIgnoreCase("studysub")) {
        name = "study_subject";
    } else if (name.equalsIgnoreCase("eventcrf")) {
        name = "event_crf";
    } else if (name.equalsIgnoreCase("studyevent")) {
        name = "study_event";
    } else if (name.equalsIgnoreCase("itemdata")) {
        name = "item_data";
    }
    ArrayList itemAuditEvents = adao.findItemAuditEvents(entityId, name);
    request.setAttribute("itemAudits", itemAuditEvents);
    forwardPage(Page.VIEW_DISCREPANCY_NOTE);
}

Example 49 with DiscrepancyNoteBean

use of org.akaza.openclinica.bean.managestudy.DiscrepancyNoteBean in project OpenClinica by OpenClinica.

the class ViewDiscrepancyNoteServlet method fixStatusUpdatedDate.

/**
     * Update a parent DiscrepancyNoteBean's resolution status and updated date
     * to that of the latest child DiscrepancyNoteBean.
     * 
     * @param noteTree
     *            A HashMap of an Integer representing the DiscrepancyNoteBean,
     *            pointing to a parent DiscrepancyNoteBean.
     */
private void fixStatusUpdatedDate(Map<Integer, DiscrepancyNoteBean> noteTree) {
    if (noteTree == null || noteTree.isEmpty()) {
        return;
    }
    // foreach parent stored in the Map
    DiscrepancyNoteBean lastChild = null;
    ArrayList<DiscrepancyNoteBean> children;
    for (DiscrepancyNoteBean parent : noteTree.values()) {
        // The parent bean will contain in its children ArrayList property
        // the "automatic" child that is generated in the
        // database at creation, plus any "real" child notes.
        // first sort the beans so we can grab the last child
        Collections.sort(parent.getChildren());
        children = parent.getChildren();
        // tbh 02/2009 fixing an error where a monitor accesses a note
        if (children.size() > 0) {
            // >> tbh
            lastChild = children.get(children.size() - 1);
            if (lastChild != null) {
                Date lastUpdatedDate = lastChild.getCreatedDate();
                UserAccountDAO userDAO = new UserAccountDAO(sm.getDataSource());
                UserAccountBean lastUpdator = (UserAccountBean) userDAO.findByPK(lastChild.getOwnerId());
                parent.setLastUpdator(lastUpdator);
                parent.setLastDateUpdated(lastUpdatedDate);
            // parent.setResolutionStatusId(lastChild.getResolutionStatusId());
            // parent.setResStatus(ResolutionStatus.get(lastChild.getResolutionStatusId()));
            }
        }
    }
    // Sorting parent notes according to the last child being updated. The
    // parent who has the most recently updated child gets into the top.
    List<DiscrepancyNoteBean> parentNotes = new ArrayList<DiscrepancyNoteBean>(noteTree.values());
    Collections.sort(parentNotes, new Comparator<DiscrepancyNoteBean>() {

        @Override
        public int compare(DiscrepancyNoteBean dn1, DiscrepancyNoteBean dn2) {
            ArrayList<DiscrepancyNoteBean> cn1 = dn1.getChildren();
            DiscrepancyNoteBean child1 = cn1.size() > 0 ? cn1.get(cn1.size() - 1) : dn1;
            ArrayList<DiscrepancyNoteBean> cn2 = dn2.getChildren();
            DiscrepancyNoteBean child2 = cn2.size() > 0 ? cn2.get(cn2.size() - 1) : dn2;
            return child1.getId() > child2.getId() ? -1 : 1;
        // return
        // ((DiscrepancyNoteBean)o1).getLastDateUpdated().after(((DiscrepancyNoteBean)o2).getLastDateUpdated())
        // ? -1 : 1;
        }
    });
    noteTree.clear();
    for (DiscrepancyNoteBean dn : parentNotes) {
        noteTree.put(dn.getId(), dn);
    }
}

Example 50 with DiscrepancyNoteBean

use of org.akaza.openclinica.bean.managestudy.DiscrepancyNoteBean in project OpenClinica by OpenClinica.

the class VerifyImportedCRFDataServlet method processRequest.

@Override
@SuppressWarnings(value = "unchecked")
public void processRequest() throws Exception {
    ItemDataDAO itemDataDao = new ItemDataDAO(sm.getDataSource());
    itemDataDao.setFormatDates(false);
    EventCRFDAO eventCrfDao = new EventCRFDAO(sm.getDataSource());
    CrfBusinessLogicHelper crfBusinessLogicHelper = new CrfBusinessLogicHelper(sm.getDataSource());
    String action = request.getParameter("action");
    FormProcessor fp = new FormProcessor(request);
    // checks which module the requests are from
    String module = fp.getString(MODULE);
    request.setAttribute(MODULE, module);
    resetPanel();
    panel.setStudyInfoShown(false);
    panel.setOrderedData(true);
    setToPanel(resword.getString("create_CRF"), respage.getString("br_create_new_CRF_entering"));
    setToPanel(resword.getString("create_CRF_version"), respage.getString("br_create_new_CRF_uploading"));
    setToPanel(resword.getString("revise_CRF_version"), respage.getString("br_if_you_owner_CRF_version"));
    setToPanel(resword.getString("CRF_spreadsheet_template"), respage.getString("br_download_blank_CRF_spreadsheet_from"));
    setToPanel(resword.getString("example_CRF_br_spreadsheets"), respage.getString("br_download_example_CRF_instructions_from"));
    if ("confirm".equalsIgnoreCase(action)) {
        List<DisplayItemBeanWrapper> displayItemBeanWrappers = (List<DisplayItemBeanWrapper>) session.getAttribute("importedData");
        logger.info("Size of displayItemBeanWrappers : " + displayItemBeanWrappers.size());
        forwardPage(Page.VERIFY_IMPORT_CRF_DATA);
    }
    if ("save".equalsIgnoreCase(action)) {
        // setup ruleSets to run if applicable
        RuleSetServiceInterface ruleSetService = (RuleSetServiceInterface) SpringServletAccess.getApplicationContext(context).getBean("ruleSetService");
        List<ImportDataRuleRunnerContainer> containers = this.ruleRunSetup(sm.getDataSource(), currentStudy, ub, ruleSetService);
        List<DisplayItemBeanWrapper> displayItemBeanWrappers = (List<DisplayItemBeanWrapper>) session.getAttribute("importedData");
        // System.out.println("Size of displayItemBeanWrappers : " +
        // displayItemBeanWrappers.size());
        HashMap<Integer, String> importedCRFStatuses = (HashMap<Integer, String>) session.getAttribute("importedCRFStatuses");
        for (DisplayItemBeanWrapper wrapper : displayItemBeanWrappers) {
            boolean resetSDV = false;
            int eventCrfBeanId = -1;
            EventCRFBean eventCrfBean = new EventCRFBean();
            // TODO : tom , the wrapper object has all the necessary data -
            // as you see we check the
            // is to see if this data is Savable if it is then we go ahead
            // and save it. if not we discard.
            // So the change needs to happen here , instead of discarding we
            // need to file discrepancy notes
            // and save the data. If you look in the
            // Page.VERIFY_IMPORT_CRF_DATA jsp file you can see how I am
            // pulling the errors. and use that in the same way.
            logger.info("right before we check to make sure it is savable: " + wrapper.isSavable());
            if (wrapper.isSavable()) {
                ArrayList<Integer> eventCrfInts = new ArrayList<Integer>();
                // wrapper.getValidationErrors().toString());
                for (DisplayItemBean displayItemBean : wrapper.getDisplayItemBeans()) {
                    eventCrfBeanId = displayItemBean.getData().getEventCRFId();
                    eventCrfBean = (EventCRFBean) eventCrfDao.findByPK(eventCrfBeanId);
                    logger.info("found value here: " + displayItemBean.getData().getValue());
                    logger.info("found status here: " + eventCrfBean.getStatus().getName());
                    // System.out.println("found event crf bean name here: "
                    // +
                    // eventCrfBean.getEventName()+" id "+eventCrfBean.getId
                    // ());
                    // SO, items can be created in a wrapper which is set to
                    // overwrite
                    // we get around this by checking the bean first, to
                    // make sure it's not null
                    ItemDataBean itemDataBean = new ItemDataBean();
                    itemDataBean = itemDataDao.findByItemIdAndEventCRFIdAndOrdinal(displayItemBean.getItem().getId(), eventCrfBean.getId(), displayItemBean.getData().getOrdinal());
                    if (wrapper.isOverwrite() && itemDataBean.getStatus() != null) {
                        if (!itemDataBean.getValue().equals(displayItemBean.getData().getValue()))
                            resetSDV = true;
                        logger.info("just tried to find item data bean on item name " + displayItemBean.getItem().getName());
                        itemDataBean.setUpdatedDate(new Date());
                        itemDataBean.setUpdater(ub);
                        itemDataBean.setValue(displayItemBean.getData().getValue());
                        // set status?
                        itemDataDao.update(itemDataBean);
                        logger.info("updated: " + itemDataBean.getItemId());
                        // need to set pk here in order to create dn
                        displayItemBean.getData().setId(itemDataBean.getId());
                    } else {
                        resetSDV = true;
                        itemDataDao.create(displayItemBean.getData());
                        logger.info("created: " + displayItemBean.getData().getItemId() + "event CRF ID = " + eventCrfBean.getId() + "CRF VERSION ID =" + eventCrfBean.getCRFVersionId());
                        // does this dao function work for repeating
                        // events/groups?
                        // ItemDataBean itemDataBean =
                        // itemDataDao.findByEventCRFIdAndItemName(
                        // eventCrfBean,
                        // displayItemBean.getItem().getName());
                        ItemDataBean itemDataBean2 = itemDataDao.findByItemIdAndEventCRFIdAndOrdinal(displayItemBean.getItem().getId(), eventCrfBean.getId(), displayItemBean.getData().getOrdinal());
                        logger.info("found: id " + itemDataBean2.getId() + " name " + itemDataBean2.getName());
                        displayItemBean.getData().setId(itemDataBean2.getId());
                    }
                    // logger.info("created item data bean:
                    // "+displayItemBean.getData().getId());
                    // logger.info("created:
                    // "+displayItemBean.getData().getName());
                    // logger.info("continued:
                    // "+displayItemBean.getData().getItemId());
                    ItemDAO idao = new ItemDAO(sm.getDataSource());
                    ItemBean ibean = (ItemBean) idao.findByPK(displayItemBean.getData().getItemId());
                    // logger.info("continued2: getName " +
                    // ibean.getName());
                    // System.out.println("*** checking for validation errors: "
                    // + ibean.getName());
                    String itemOid = displayItemBean.getItem().getOid() + "_" + wrapper.getStudyEventRepeatKey() + "_" + displayItemBean.getData().getOrdinal() + "_" + wrapper.getStudySubjectOid();
                    if (wrapper.getValidationErrors().containsKey(itemOid)) {
                        ArrayList messageList = (ArrayList) wrapper.getValidationErrors().get(itemOid);
                        // could it be more than one? tbh 08/2008
                        for (int iter = 0; iter < messageList.size(); iter++) {
                            String message = (String) messageList.get(iter);
                            DiscrepancyNoteBean parentDn = ImportSpringJob.createDiscrepancyNote(ibean, message, eventCrfBean, displayItemBean, null, ub, sm.getDataSource(), currentStudy);
                            ImportSpringJob.createDiscrepancyNote(ibean, message, eventCrfBean, displayItemBean, parentDn.getId(), ub, sm.getDataSource(), currentStudy);
                        // System.out.println("*** created disc note with message: "
                        // + message);
                        // displayItemBean);
                        }
                    }
                    // "+displayItemBean.getDbData().getName());
                    if (!eventCrfInts.contains(new Integer(eventCrfBean.getId()))) {
                        String eventCRFStatus = importedCRFStatuses.get(new Integer(eventCrfBean.getId()));
                        if (eventCRFStatus != null && eventCRFStatus.equals(DataEntryStage.INITIAL_DATA_ENTRY.getName()) && eventCrfBean.getStatus().isAvailable()) {
                            crfBusinessLogicHelper.markCRFStarted(eventCrfBean, ub);
                        } else {
                            crfBusinessLogicHelper.markCRFComplete(eventCrfBean, ub);
                        }
                        eventCrfInts.add(new Integer(eventCrfBean.getId()));
                    }
                }
                // Reset the SDV status if item data has been changed or added
                if (eventCrfBean != null && resetSDV)
                    eventCrfDao.setSDVStatus(false, ub.getId(), eventCrfBean.getId());
            // end of item datas, tbh
            // crfBusinessLogicHelper.markCRFComplete(eventCrfBean, ub);
            // System .out.println("*** just updated event crf bean: "+
            // eventCrfBean.getId());
            // need to update the study event status as well, tbh
            // crfBusinessLogicHelper.updateStudyEvent(eventCrfBean,
            // ub);
            // above should do it for us, tbh 08/2008
            }
        }
        addPageMessage(respage.getString("data_has_been_successfully_import"));
        addPageMessage(this.ruleActionWarnings(this.runRules(currentStudy, ub, containers, ruleSetService, ExecutionMode.SAVE)));
        // forwardPage(Page.SUBMIT_DATA_SERVLET);
        forwardPage(Page.LIST_STUDY_SUBJECTS_SERVLET);
    // replaced tbh, 06/2009
    }
}