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Example 16 with DisplayStudyEventBean

use of org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean in project OpenClinica by OpenClinica.

the class RemoveStudySubjectServlet method processRequest.

@Override
public void processRequest() throws Exception {
    // studySubjectId
    String studySubIdString = request.getParameter("id");
    String subIdString = request.getParameter("subjectId");
    String studyIdString = request.getParameter("studyId");
    SubjectDAO sdao = new SubjectDAO(sm.getDataSource());
    StudySubjectDAO subdao = new StudySubjectDAO(sm.getDataSource());
    if (StringUtil.isBlank(studySubIdString) || StringUtil.isBlank(subIdString) || StringUtil.isBlank(studyIdString)) {
        addPageMessage(respage.getString("please_choose_a_study_subject_to_remove"));
        forwardPage(Page.LIST_STUDY_SUBJECTS_SERVLET);
    } else {
        int studyId = Integer.valueOf(studyIdString.trim()).intValue();
        int studySubId = Integer.valueOf(studySubIdString.trim()).intValue();
        int subjectId = Integer.valueOf(subIdString.trim()).intValue();
        SubjectBean subject = (SubjectBean) sdao.findByPK(subjectId);
        StudySubjectBean studySub = (StudySubjectBean) subdao.findByPK(studySubId);
        StudyDAO studydao = new StudyDAO(sm.getDataSource());
        StudyBean study = (StudyBean) studydao.findByPK(studyId);
        checkRoleByUserAndStudy(ub, study.getParentStudyId(), study.getId());
        // find study events
        StudyEventDAO sedao = new StudyEventDAO(sm.getDataSource());
        //            ArrayList events = sedao.findAllByStudyAndStudySubjectId(study, studySubId);
        ArrayList<DisplayStudyEventBean> displayEvents = ViewStudySubjectServlet.getDisplayStudyEventsForStudySubject(studySub, sm.getDataSource(), ub, currentRole);
        String action = request.getParameter("action");
        if ("confirm".equalsIgnoreCase(action)) {
            if (!studySub.getStatus().equals(Status.AVAILABLE)) {
                addPageMessage(respage.getString("this_subject_is_not_available_for_this_study") + " " + respage.getString("please_contact_sysadmin_for_more_information"));
                forwardPage(Page.LIST_STUDY_SUBJECTS_SERVLET);
                return;
            }
            request.setAttribute("subject", subject);
            request.setAttribute("study", study);
            request.setAttribute("studySub", studySub);
            request.setAttribute("events", displayEvents);
            forwardPage(Page.REMOVE_STUDY_SUBJECT);
        } else {
            logger.info("submit to remove the subject from study");
            // remove subject from study
            studySub.setStatus(Status.DELETED);
            studySub.setUpdater(ub);
            studySub.setUpdatedDate(new Date());
            subdao.update(studySub);
            // remove all study events
            // remove all event crfs
            EventCRFDAO ecdao = new EventCRFDAO(sm.getDataSource());
            for (int j = 0; j < displayEvents.size(); j++) {
                DisplayStudyEventBean dispEvent = displayEvents.get(j);
                StudyEventBean event = dispEvent.getStudyEvent();
                if (!event.getStatus().equals(Status.DELETED)) {
                    event.setStatus(Status.AUTO_DELETED);
                    event.setUpdater(ub);
                    event.setUpdatedDate(new Date());
                    sedao.update(event);
                    ArrayList eventCRFs = ecdao.findAllByStudyEvent(event);
                    ItemDataDAO iddao = new ItemDataDAO(sm.getDataSource());
                    for (int k = 0; k < eventCRFs.size(); k++) {
                        EventCRFBean eventCRF = (EventCRFBean) eventCRFs.get(k);
                        if (!eventCRF.getStatus().equals(Status.DELETED)) {
                            eventCRF.setStatus(Status.AUTO_DELETED);
                            eventCRF.setUpdater(ub);
                            eventCRF.setUpdatedDate(new Date());
                            ecdao.update(eventCRF);
                            // remove all the item data
                            ArrayList itemDatas = iddao.findAllByEventCRFId(eventCRF.getId());
                            for (int a = 0; a < itemDatas.size(); a++) {
                                ItemDataBean item = (ItemDataBean) itemDatas.get(a);
                                if (!item.getStatus().equals(Status.DELETED)) {
                                    item.setStatus(Status.AUTO_DELETED);
                                    item.setUpdater(ub);
                                    item.setUpdatedDate(new Date());
                                    iddao.update(item);
                                }
                            }
                        }
                    }
                }
            }
            String emailBody = respage.getString("the_subject") + " " + subject.getName() + " " + respage.getString("has_been_removed_from_the_study") + study.getName() + ".";
            addPageMessage(emailBody);
            //                try{
            //                    sendEmail(emailBody);    
            //                }catch(Exception ex){
            //                    addPageMessage(respage.getString("mail_cannot_be_sent_to_admin"));
            //                }
            forwardPage(Page.LIST_STUDY_SUBJECTS_SERVLET);
        }
    }
}
Also used : StudySubjectDAO(org.akaza.openclinica.dao.managestudy.StudySubjectDAO) SubjectDAO(org.akaza.openclinica.dao.submit.SubjectDAO) StudyBean(org.akaza.openclinica.bean.managestudy.StudyBean) ArrayList(java.util.ArrayList) StudyEventBean(org.akaza.openclinica.bean.managestudy.StudyEventBean) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) StudySubjectDAO(org.akaza.openclinica.dao.managestudy.StudySubjectDAO) Date(java.util.Date) ItemDataDAO(org.akaza.openclinica.dao.submit.ItemDataDAO) SubjectBean(org.akaza.openclinica.bean.submit.SubjectBean) StudySubjectBean(org.akaza.openclinica.bean.managestudy.StudySubjectBean) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) EventCRFBean(org.akaza.openclinica.bean.submit.EventCRFBean) StudySubjectBean(org.akaza.openclinica.bean.managestudy.StudySubjectBean) ItemDataBean(org.akaza.openclinica.bean.submit.ItemDataBean) StudyEventDAO(org.akaza.openclinica.dao.managestudy.StudyEventDAO) StudyDAO(org.akaza.openclinica.dao.managestudy.StudyDAO) EventCRFDAO(org.akaza.openclinica.dao.submit.EventCRFDAO)

Example 17 with DisplayStudyEventBean

use of org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean in project OpenClinica by OpenClinica.

the class RestoreStudyEventServlet method processRequest.

@Override
public void processRequest() throws Exception {
    FormProcessor fp = new FormProcessor(request);
    // studyEventId
    int studyEventId = fp.getInt("id");
    // studySubjectId
    int studySubId = fp.getInt("studySubId");
    StudyEventDAO sedao = new StudyEventDAO(sm.getDataSource());
    StudySubjectDAO subdao = new StudySubjectDAO(sm.getDataSource());
    if (studyEventId == 0) {
        addPageMessage(respage.getString("please_choose_a_SE_to_restore"));
        request.setAttribute("id", new Integer(studySubId).toString());
        forwardPage(Page.VIEW_STUDY_SUBJECT_SERVLET);
    } else {
        StudySubjectBean studySub = (StudySubjectBean) subdao.findByPK(studySubId);
        // YW 11-07-2007, a study event could not be restored if its study
        // subject has been removed
        Status s = studySub.getStatus();
        if ("removed".equalsIgnoreCase(s.getName()) || "auto-removed".equalsIgnoreCase(s.getName())) {
            addPageMessage(resword.getString("study_event") + resterm.getString("could_not_be") + resterm.getString("restored") + "." + respage.getString("study_subject_has_been_deleted"));
            request.setAttribute("id", new Integer(studySubId).toString());
            forwardPage(Page.VIEW_STUDY_SUBJECT_SERVLET);
        }
        // YW
        StudyEventBean event = (StudyEventBean) sedao.findByPK(studyEventId);
        request.setAttribute("studySub", studySub);
        StudyEventDefinitionDAO seddao = new StudyEventDefinitionDAO(sm.getDataSource());
        StudyEventDefinitionBean sed = (StudyEventDefinitionBean) seddao.findByPK(event.getStudyEventDefinitionId());
        event.setStudyEventDefinition(sed);
        StudyDAO studydao = new StudyDAO(sm.getDataSource());
        StudyBean study = (StudyBean) studydao.findByPK(studySub.getStudyId());
        request.setAttribute("study", study);
        String action = request.getParameter("action");
        if ("confirm".equalsIgnoreCase(action)) {
            if (event.getStatus().equals(Status.AVAILABLE)) {
                addPageMessage(respage.getString("this_event_is_already_available_for_study") + " " + respage.getString("please_contact_sysadmin_for_more_information"));
                request.setAttribute("id", new Integer(studySubId).toString());
                forwardPage(Page.VIEW_STUDY_SUBJECT_SERVLET);
                return;
            }
            EventDefinitionCRFDAO edcdao = new EventDefinitionCRFDAO(sm.getDataSource());
            // find all crfs in the definition
            ArrayList eventDefinitionCRFs = (ArrayList) edcdao.findAllByEventDefinitionId(study, sed.getId());
            EventCRFDAO ecdao = new EventCRFDAO(sm.getDataSource());
            ArrayList eventCRFs = ecdao.findAllByStudyEvent(event);
            // construct info needed on view study event page
            DisplayStudyEventBean de = new DisplayStudyEventBean();
            de.setStudyEvent(event);
            de.setDisplayEventCRFs(getDisplayEventCRFs(eventCRFs, eventDefinitionCRFs));
            request.setAttribute("displayEvent", de);
            forwardPage(Page.RESTORE_STUDY_EVENT);
        } else {
            logger.info("submit to restore the event to study");
            // restore event to study
            event.setStatus(Status.AVAILABLE);
            event.setUpdater(ub);
            event.setUpdatedDate(new Date());
            sedao.update(event);
            // restore event crfs
            EventCRFDAO ecdao = new EventCRFDAO(sm.getDataSource());
            ArrayList eventCRFs = ecdao.findAllByStudyEvent(event);
            ItemDataDAO iddao = new ItemDataDAO(sm.getDataSource());
            for (int k = 0; k < eventCRFs.size(); k++) {
                EventCRFBean eventCRF = (EventCRFBean) eventCRFs.get(k);
                if (eventCRF.getStatus().equals(Status.AUTO_DELETED)) {
                    eventCRF.setStatus(Status.AVAILABLE);
                    eventCRF.setUpdater(ub);
                    eventCRF.setUpdatedDate(new Date());
                    ecdao.update(eventCRF);
                    // remove all the item data
                    ArrayList itemDatas = iddao.findAllByEventCRFId(eventCRF.getId());
                    for (int a = 0; a < itemDatas.size(); a++) {
                        ItemDataBean item = (ItemDataBean) itemDatas.get(a);
                        if (item.getStatus().equals(Status.AUTO_DELETED)) {
                            item.setStatus(Status.AVAILABLE);
                            item.setUpdater(ub);
                            item.setUpdatedDate(new Date());
                            iddao.update(item);
                        }
                    }
                }
            }
            String emailBody = respage.getString("the_event") + event.getStudyEventDefinition().getName() + " " + respage.getString("has_been_restored_to_the_study") + " " + study.getName() + ".";
            addPageMessage(emailBody);
            //                sendEmail(emailBody);
            request.setAttribute("id", new Integer(studySubId).toString());
            forwardPage(Page.VIEW_STUDY_SUBJECT_SERVLET);
        }
    }
}
Also used : Status(org.akaza.openclinica.bean.core.Status) FormProcessor(org.akaza.openclinica.control.form.FormProcessor) StudyBean(org.akaza.openclinica.bean.managestudy.StudyBean) ArrayList(java.util.ArrayList) StudyEventDefinitionBean(org.akaza.openclinica.bean.managestudy.StudyEventDefinitionBean) EventDefinitionCRFDAO(org.akaza.openclinica.dao.managestudy.EventDefinitionCRFDAO) StudyEventBean(org.akaza.openclinica.bean.managestudy.StudyEventBean) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) StudySubjectDAO(org.akaza.openclinica.dao.managestudy.StudySubjectDAO) Date(java.util.Date) ItemDataDAO(org.akaza.openclinica.dao.submit.ItemDataDAO) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) EventCRFBean(org.akaza.openclinica.bean.submit.EventCRFBean) DisplayEventCRFBean(org.akaza.openclinica.bean.submit.DisplayEventCRFBean) StudySubjectBean(org.akaza.openclinica.bean.managestudy.StudySubjectBean) StudyEventDefinitionDAO(org.akaza.openclinica.dao.managestudy.StudyEventDefinitionDAO) ItemDataBean(org.akaza.openclinica.bean.submit.ItemDataBean) StudyEventDAO(org.akaza.openclinica.dao.managestudy.StudyEventDAO) StudyDAO(org.akaza.openclinica.dao.managestudy.StudyDAO) EventCRFDAO(org.akaza.openclinica.dao.submit.EventCRFDAO)

Example 18 with DisplayStudyEventBean

use of org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean in project OpenClinica by OpenClinica.

the class RestoreStudySubjectServlet method processRequest.

@Override
public void processRequest() throws Exception {
    // studySubjectId
    String studySubIdString = request.getParameter("id");
    String subIdString = request.getParameter("subjectId");
    String studyIdString = request.getParameter("studyId");
    SubjectDAO sdao = new SubjectDAO(sm.getDataSource());
    StudySubjectDAO subdao = new StudySubjectDAO(sm.getDataSource());
    if (StringUtil.isBlank(studySubIdString) || StringUtil.isBlank(subIdString) || StringUtil.isBlank(studyIdString)) {
        addPageMessage(respage.getString("please_choose_study_subject_to_restore"));
        forwardPage(Page.LIST_STUDY_SUBJECTS_SERVLET);
    } else {
        int studyId = Integer.valueOf(studyIdString.trim()).intValue();
        int studySubId = Integer.valueOf(studySubIdString.trim()).intValue();
        int subjectId = Integer.valueOf(subIdString.trim()).intValue();
        SubjectBean subject = (SubjectBean) sdao.findByPK(subjectId);
        StudySubjectBean studySub = (StudySubjectBean) subdao.findByPK(studySubId);
        StudyDAO studydao = new StudyDAO(sm.getDataSource());
        StudyBean study = (StudyBean) studydao.findByPK(studyId);
        // find study events
        StudyEventDAO sedao = new StudyEventDAO(sm.getDataSource());
        //            ArrayList events = sedao.findAllByStudyAndStudySubjectId(study, studySubId);
        ArrayList<DisplayStudyEventBean> displayEvents = ViewStudySubjectServlet.getDisplayStudyEventsForStudySubject(studySub, sm.getDataSource(), ub, currentRole);
        String action = request.getParameter("action");
        if ("confirm".equalsIgnoreCase(action)) {
            if (studySub.getStatus().equals(Status.AVAILABLE)) {
                addPageMessage(respage.getString("this_subject_is_already_available_for_study") + " " + respage.getString("please_contact_sysadmin_for_more_information"));
                forwardPage(Page.LIST_STUDY_SUBJECTS_SERVLET);
                return;
            }
            request.setAttribute("subject", subject);
            request.setAttribute("study", study);
            request.setAttribute("studySub", studySub);
            request.setAttribute("events", displayEvents);
            forwardPage(Page.RESTORE_STUDY_SUBJECT);
        } else {
            logger.info("submit to restore the subject from study");
            // restore subject from study
            studySub.setStatus(Status.AVAILABLE);
            studySub.setUpdater(ub);
            studySub.setUpdatedDate(new Date());
            subdao.update(studySub);
            // restore all study events
            // restore all event crfs
            EventCRFDAO ecdao = new EventCRFDAO(sm.getDataSource());
            for (int j = 0; j < displayEvents.size(); j++) {
                DisplayStudyEventBean dispEvent = displayEvents.get(j);
                StudyEventBean event = dispEvent.getStudyEvent();
                if (event.getStatus().equals(Status.AUTO_DELETED)) {
                    event.setStatus(Status.AVAILABLE);
                    event.setUpdater(ub);
                    event.setUpdatedDate(new Date());
                    sedao.update(event);
                }
                ArrayList eventCRFs = ecdao.findAllByStudyEvent(event);
                ItemDataDAO iddao = new ItemDataDAO(sm.getDataSource());
                for (int k = 0; k < eventCRFs.size(); k++) {
                    EventCRFBean eventCRF = (EventCRFBean) eventCRFs.get(k);
                    if (eventCRF.getStatus().equals(Status.AUTO_DELETED)) {
                        eventCRF.setStatus(Status.AVAILABLE);
                        eventCRF.setUpdater(ub);
                        eventCRF.setUpdatedDate(new Date());
                        ecdao.update(eventCRF);
                        // remove all the item data
                        ArrayList itemDatas = iddao.findAllByEventCRFId(eventCRF.getId());
                        for (int a = 0; a < itemDatas.size(); a++) {
                            ItemDataBean item = (ItemDataBean) itemDatas.get(a);
                            if (item.getStatus().equals(Status.AUTO_DELETED)) {
                                item.setStatus(Status.AVAILABLE);
                                item.setUpdater(ub);
                                item.setUpdatedDate(new Date());
                                iddao.update(item);
                            }
                        }
                    }
                }
            }
            String emailBody = respage.getString("the_subject") + " " + subject.getName() + " " + respage.getString("has_been_restored_to_the_study") + " " + study.getName() + ".";
            addPageMessage(emailBody);
            //                try{
            //                    sendEmail(emailBody);
            //                }catch (Exception ex){
            //                    addPageMessage(respage.getString("mail_cannot_be_sent_to_admin"));
            //                }
            forwardPage(Page.LIST_STUDY_SUBJECTS_SERVLET);
        }
    }
}
Also used : StudySubjectDAO(org.akaza.openclinica.dao.managestudy.StudySubjectDAO) SubjectDAO(org.akaza.openclinica.dao.submit.SubjectDAO) StudyBean(org.akaza.openclinica.bean.managestudy.StudyBean) ArrayList(java.util.ArrayList) StudyEventBean(org.akaza.openclinica.bean.managestudy.StudyEventBean) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) StudySubjectDAO(org.akaza.openclinica.dao.managestudy.StudySubjectDAO) Date(java.util.Date) ItemDataDAO(org.akaza.openclinica.dao.submit.ItemDataDAO) SubjectBean(org.akaza.openclinica.bean.submit.SubjectBean) StudySubjectBean(org.akaza.openclinica.bean.managestudy.StudySubjectBean) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) EventCRFBean(org.akaza.openclinica.bean.submit.EventCRFBean) StudySubjectBean(org.akaza.openclinica.bean.managestudy.StudySubjectBean) ItemDataBean(org.akaza.openclinica.bean.submit.ItemDataBean) StudyEventDAO(org.akaza.openclinica.dao.managestudy.StudyEventDAO) StudyDAO(org.akaza.openclinica.dao.managestudy.StudyDAO) EventCRFDAO(org.akaza.openclinica.dao.submit.EventCRFDAO)

Example 19 with DisplayStudyEventBean

use of org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean in project OpenClinica by OpenClinica.

the class ListEventsForSubjectServlet method processRequest.

@Override
public void processRequest() throws Exception {
    FormProcessor fp = new FormProcessor(request);
    // checks which module the requests are from
    String module = fp.getString(MODULE);
    request.setAttribute(MODULE, module);
    String pageNumber = fp.getString(ListStudySubjectServlet.SUBJECT_PAGE_NUMBER);
    String filterKeyword = fp.getString(ListStudySubjectServlet.FILTER_KEYWORD);
    String tmpSearch = fp.getString(ListStudySubjectServlet.SEARCH_SUBMITTED);
    boolean searchSubmitted = !(tmpSearch == null || "".equalsIgnoreCase(tmpSearch)) && !"".equalsIgnoreCase(filterKeyword);
    SubjectMatrixUtil matrixUtil = new SubjectMatrixUtil();
    String query = matrixUtil.createPaginatingQuery(pageNumber);
    StringBuilder extendedQuery = new StringBuilder(query);
    // URL encode the search keyword, since it will be a parameter in the
    // URL
    String filterKeywordURLEncode = java.net.URLEncoder.encode(filterKeyword, "UTF-8");
    if (searchSubmitted) {
        extendedQuery.append("&ebl_sortColumnInd=0&submitted=1&ebl_sortAscending=1&ebl_filtered=1");
        extendedQuery.append("&").append(ListStudySubjectServlet.FILTER_KEYWORD).append("=").append(filterKeywordURLEncode);
    }
    request.setAttribute(ListStudySubjectServlet.PAGINATING_QUERY, extendedQuery.toString());
    int definitionId = fp.getInt("defId");
    int tabId = fp.getInt("tab");
    if (definitionId <= 0) {
        addPageMessage(respage.getString("please_choose_an_ED_ta_to_vies_details"));
        forwardPage(Page.LIST_STUDY_SUBJECTS);
        return;
    }
    StudyEventDefinitionDAO seddao = new StudyEventDefinitionDAO(sm.getDataSource());
    StudyEventDefinitionBean sed = (StudyEventDefinitionBean) seddao.findByPK(definitionId);
    StudySubjectDAO sdao = new StudySubjectDAO(sm.getDataSource());
    StudyEventDAO sedao = new StudyEventDAO(sm.getDataSource());
    SubjectGroupMapDAO sgmdao = new SubjectGroupMapDAO(sm.getDataSource());
    StudyGroupClassDAO sgcdao = new StudyGroupClassDAO(sm.getDataSource());
    EventCRFDAO ecdao = new EventCRFDAO(sm.getDataSource());
    EventDefinitionCRFDAO edcdao = new EventDefinitionCRFDAO(sm.getDataSource());
    CRFDAO crfdao = new CRFDAO(sm.getDataSource());
    // find all the groups in the current study
    ArrayList studyGroupClasses = sgcdao.findAllActiveByStudy(currentStudy);
    // information for the event tabs
    ArrayList allDefs = seddao.findAllActiveByStudy(currentStudy);
    boolean isASite = false;
    if (currentStudy.getParentStudyId() > 0) {
        StudyDAO stdao = new StudyDAO(sm.getDataSource());
        StudyBean parent = (StudyBean) stdao.findByPK(currentStudy.getParentStudyId());
        allDefs = seddao.findAllActiveByStudy(parent);
    }
    ArrayList eventDefinitionCRFs = (ArrayList) edcdao.findAllActiveByEventDefinitionId(this.currentStudy, definitionId);
    for (int i = 0; i < eventDefinitionCRFs.size(); i++) {
        EventDefinitionCRFBean edc = (EventDefinitionCRFBean) eventDefinitionCRFs.get(i);
        CRFBean crf = (CRFBean) crfdao.findByPK(edc.getCrfId());
        edc.setCrf(crf);
    }
    request.setAttribute("studyGroupClasses", studyGroupClasses);
    request.setAttribute("allDefsArray", allDefs);
    request.setAttribute("allDefsNumber", new Integer(allDefs.size()));
    request.setAttribute("groupSize", new Integer(studyGroupClasses.size()));
    request.setAttribute("eventDefCRFSize", new Integer(eventDefinitionCRFs.size()));
    request.setAttribute("tabId", new Integer(tabId));
    request.setAttribute("studyEventDef", sed);
    request.setAttribute("eventDefCRFs", eventDefinitionCRFs);
    // find all the subjects in current study
    ArrayList subjects = sdao.findAllByStudyId(currentStudy.getId());
    ArrayList displayStudySubs = new ArrayList();
    for (int i = 0; i < subjects.size(); i++) {
        StudySubjectBean studySub = (StudySubjectBean) subjects.get(i);
        ArrayList groups = (ArrayList) sgmdao.findAllByStudySubject(studySub.getId());
        ArrayList subGClasses = new ArrayList();
        for (int j = 0; j < studyGroupClasses.size(); j++) {
            StudyGroupClassBean sgc = (StudyGroupClassBean) studyGroupClasses.get(j);
            boolean hasClass = false;
            for (int k = 0; k < groups.size(); k++) {
                SubjectGroupMapBean sgmb = (SubjectGroupMapBean) groups.get(k);
                if (sgmb.getGroupClassName().equalsIgnoreCase(sgc.getName())) {
                    subGClasses.add(sgmb);
                    hasClass = true;
                    break;
                }
            }
            if (!hasClass) {
                subGClasses.add(new SubjectGroupMapBean());
            }
        }
        // find all eventcrfs for each event, for each event tab
        ArrayList displaySubjectEvents = new ArrayList();
        ArrayList<DisplayStudyEventBean> displayEvents = new ArrayList<DisplayStudyEventBean>();
        ArrayList events = sedao.findAllByStudySubjectAndDefinition(studySub, sed);
        for (int k = 0; k < events.size(); k++) {
            StudyEventBean seb = (StudyEventBean) events.get(k);
            DisplayStudyEventBean dseb = ListStudySubjectServlet.getDisplayStudyEventsForStudySubject(studySub, seb, sm.getDataSource(), ub, currentRole, this.currentStudy);
            // ArrayList eventCRFs = ecdao.findAllByStudyEvent(seb);
            // ArrayList al =
            // ViewStudySubjectServlet.getUncompletedCRFs(sm.getDataSource(),
            // eventDefinitionCRFs, eventCRFs);
            // dseb.getUncompletedCRFs().add(al);
            displayEvents.add(dseb);
        }
        ArrayList al = new ArrayList();
        for (int k = 0; k < displayEvents.size(); k++) {
            DisplayStudyEventBean dseb = displayEvents.get(k);
            ArrayList eventCRFs = dseb.getDisplayEventCRFs();
            for (int a = 0; a < eventDefinitionCRFs.size(); a++) {
                EventDefinitionCRFBean edc = (EventDefinitionCRFBean) eventDefinitionCRFs.get(a);
                int crfId = edc.getCrfId();
                boolean hasCRF = false;
                for (int b = 0; b < eventCRFs.size(); b++) {
                    DisplayEventCRFBean decb = (DisplayEventCRFBean) eventCRFs.get(b);
                    // decb.getStage().getName() );
                    if (decb.getEventCRF().getCrf().getId() == crfId) {
                        dseb.getAllEventCRFs().add(decb);
                        // logger.info("hasCRf" + crfId +
                        // decb.getEventCRF().getCrf().getName());
                        hasCRF = true;
                        break;
                    }
                }
                if (hasCRF == false) {
                    DisplayEventCRFBean db = new DisplayEventCRFBean();
                    db.setEventDefinitionCRF(edc);
                    db.getEventDefinitionCRF().setCrf(edc.getCrf());
                    dseb.getAllEventCRFs().add(db);
                // logger.info("noCRf" + crfId);
                }
            }
            // Issue 3212 BWP <<
            if (currentStudy.getParentStudyId() > 0) {
                // check each eventDefCRFBean and set its isHidden property
                // to true, if its
                // persistent/database-derived hideCrf is true (domain rule:
                // hide the CRF from users logged into a site)
                HideCRFManager hideCRFManager = HideCRFManager.createHideCRFManager();
                hideCRFManager.optionallyCheckHideCRFProperty(dseb);
                // remove a DisplayEventCRFBean from a DisplayStudyEventBean
                // in the list
                // if it contains a hidden CRF in its event definition
                hideCRFManager.removeHiddenEventCRF(dseb);
                // generate a boolean request attribute indicating whether
                // any of the CRFs
                // should be hidden
                boolean hideCRFs = hideCRFManager.studyEventHasAHideCRFProperty(dseb);
                request.setAttribute("hideCRFs", hideCRFs);
            }
        // >>
        }
        DisplayStudySubjectBean dssb = new DisplayStudySubjectBean();
        dssb.setStudySubject(studySub);
        dssb.setStudyGroups(subGClasses);
        dssb.setStudyEvents(displayEvents);
        if (definitionId > 0) {
            dssb.setSedId(definitionId);
        } else {
            dssb.setSedId(-1);
        }
        displayStudySubs.add(dssb);
    }
    EntityBeanTable table = fp.getEntityBeanTable();
    ArrayList allStudyRows = DisplayStudySubjectEventsRow.generateRowsFromBeans(displayStudySubs);
    ArrayList columnArray = new ArrayList();
    columnArray.add(resword.getString("ID"));
    columnArray.add(resword.getString("subject_status"));
    columnArray.add(resword.getString("gender"));
    for (int i = 0; i < studyGroupClasses.size(); i++) {
        StudyGroupClassBean sgc = (StudyGroupClassBean) studyGroupClasses.get(i);
        columnArray.add(sgc.getName());
    }
    // columnArray.add("Event Sequence");
    columnArray.add(resword.getString("event_status"));
    columnArray.add(resword.getString("event_date"));
    // Issue 3212 BWP <<
    HideCRFManager hideCRFMgr = HideCRFManager.createHideCRFManager();
    hideCRFMgr.hideSpecifiedEventCRFDefBeans(eventDefinitionCRFs);
    for (int i = 0; i < eventDefinitionCRFs.size(); i++) {
        EventDefinitionCRFBean edc = (EventDefinitionCRFBean) eventDefinitionCRFs.get(i);
        // Issue 3212 BWP <<
        if (!(currentStudy.getParentStudyId() > 0)) {
            columnArray.add(edc.getCrf().getName());
        } else {
            if (!edc.isHideCrf()) {
                columnArray.add(edc.getCrf().getName());
            }
        }
    // >>
    }
    columnArray.add(resword.getString("actions"));
    String[] columns = new String[columnArray.size()];
    columnArray.toArray(columns);
    table.setColumns(new ArrayList(Arrays.asList(columns)));
    table.setQuery("ListEventsForSubject?module=" + module + "&defId=" + definitionId + "&tab=" + tabId, new HashMap());
    table.hideColumnLink(columnArray.size() - 1);
    // if(currentStudy.getStatus().isAvailable()){
    // table.addLink(resword.getString("add_new_subject"), "AddNewSubject");
    // }
    table.setRows(allStudyRows);
    if (filterKeyword != null && !"".equalsIgnoreCase(filterKeyword)) {
        table.setKeywordFilter(filterKeyword);
    }
    table.computeDisplay();
    request.setAttribute("table", table);
    forwardPage(Page.LIST_EVENTS_FOR_SUBJECT);
}
Also used : SubjectGroupMapBean(org.akaza.openclinica.bean.submit.SubjectGroupMapBean) HashMap(java.util.HashMap) StudyGroupClassDAO(org.akaza.openclinica.dao.managestudy.StudyGroupClassDAO) EntityBeanTable(org.akaza.openclinica.web.bean.EntityBeanTable) ArrayList(java.util.ArrayList) StudyEventDefinitionBean(org.akaza.openclinica.bean.managestudy.StudyEventDefinitionBean) StudyEventBean(org.akaza.openclinica.bean.managestudy.StudyEventBean) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) DisplayStudySubjectBean(org.akaza.openclinica.bean.managestudy.DisplayStudySubjectBean) StudyEventDAO(org.akaza.openclinica.dao.managestudy.StudyEventDAO) StudyGroupClassBean(org.akaza.openclinica.bean.managestudy.StudyGroupClassBean) StudyDAO(org.akaza.openclinica.dao.managestudy.StudyDAO) EventCRFDAO(org.akaza.openclinica.dao.submit.EventCRFDAO) EventDefinitionCRFDAO(org.akaza.openclinica.dao.managestudy.EventDefinitionCRFDAO) EventCRFDAO(org.akaza.openclinica.dao.submit.EventCRFDAO) CRFDAO(org.akaza.openclinica.dao.admin.CRFDAO) SubjectGroupMapDAO(org.akaza.openclinica.dao.submit.SubjectGroupMapDAO) FormProcessor(org.akaza.openclinica.control.form.FormProcessor) StudyBean(org.akaza.openclinica.bean.managestudy.StudyBean) EventDefinitionCRFDAO(org.akaza.openclinica.dao.managestudy.EventDefinitionCRFDAO) StudySubjectDAO(org.akaza.openclinica.dao.managestudy.StudySubjectDAO) HideCRFManager(org.akaza.openclinica.service.crfdata.HideCRFManager) CRFBean(org.akaza.openclinica.bean.admin.CRFBean) DisplayEventCRFBean(org.akaza.openclinica.bean.submit.DisplayEventCRFBean) EventDefinitionCRFBean(org.akaza.openclinica.bean.managestudy.EventDefinitionCRFBean) DisplayEventCRFBean(org.akaza.openclinica.bean.submit.DisplayEventCRFBean) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) StudyEventDefinitionDAO(org.akaza.openclinica.dao.managestudy.StudyEventDefinitionDAO) DisplayStudySubjectBean(org.akaza.openclinica.bean.managestudy.DisplayStudySubjectBean) StudySubjectBean(org.akaza.openclinica.bean.managestudy.StudySubjectBean) EventDefinitionCRFBean(org.akaza.openclinica.bean.managestudy.EventDefinitionCRFBean)

Example 20 with DisplayStudyEventBean

use of org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean in project OpenClinica by OpenClinica.

the class DeleteStudyEventServlet method processRequest.

@Override
public void processRequest() throws Exception {
    FormProcessor fp = new FormProcessor(request);
    // studyEventId
    int studyEventId = fp.getInt("id");
    // studySubjectId
    int studySubId = fp.getInt("studySubId");
    StudyEventDAO sedao = new StudyEventDAO(sm.getDataSource());
    StudySubjectDAO subdao = new StudySubjectDAO(sm.getDataSource());
    if (studyEventId == 0) {
        addPageMessage(respage.getString("please_choose_a_SE_to_remove"));
        request.setAttribute("id", new Integer(studySubId).toString());
        forwardPage(Page.VIEW_STUDY_SUBJECT_SERVLET);
    } else {
        StudyEventBean event = (StudyEventBean) sedao.findByPK(studyEventId);
        StudySubjectBean studySub = (StudySubjectBean) subdao.findByPK(studySubId);
        request.setAttribute("studySub", studySub);
        StudyEventDefinitionDAO seddao = new StudyEventDefinitionDAO(sm.getDataSource());
        StudyEventDefinitionBean sed = (StudyEventDefinitionBean) seddao.findByPK(event.getStudyEventDefinitionId());
        event.setStudyEventDefinition(sed);
        StudyDAO studydao = new StudyDAO(sm.getDataSource());
        StudyBean study = (StudyBean) studydao.findByPK(studySub.getStudyId());
        request.setAttribute("study", study);
        String action = request.getParameter("action");
        if ("confirm".equalsIgnoreCase(action)) {
            EventDefinitionCRFDAO edcdao = new EventDefinitionCRFDAO(sm.getDataSource());
            // find all crfs in the definition
            ArrayList eventDefinitionCRFs = (ArrayList) edcdao.findAllByEventDefinitionId(study, sed.getId());
            EventCRFDAO ecdao = new EventCRFDAO(sm.getDataSource());
            // construct info needed on view study event page
            DisplayStudyEventBean de = new DisplayStudyEventBean();
            de.setStudyEvent(event);
            request.setAttribute("displayEvent", de);
            //                request.setAttribute("crfs", eventDefinitionCRFs);
            forwardPage(Page.DELETE_STUDY_EVENT);
        } else {
            logger.info("submit to delete the event from study");
            // delete event from study
            event.setSubjectEventStatus(SubjectEventStatus.NOT_SCHEDULED);
            event.setUpdater(ub);
            event.setUpdatedDate(new Date());
            sedao.update(event);
            String emailBody = respage.getString("the_event") + " " + event.getStudyEventDefinition().getName() + " " + respage.getString("has_been_removed_from_the_subject_record_for") + " " + studySub.getLabel() + " " + respage.getString("in_the_study") + " " + study.getName() + ".";
            addPageMessage(emailBody);
            //                sendEmail(emailBody);
            request.setAttribute("id", new Integer(studySubId).toString());
            forwardPage(Page.VIEW_STUDY_SUBJECT_SERVLET);
        }
    }
}
Also used : FormProcessor(org.akaza.openclinica.control.form.FormProcessor) StudyBean(org.akaza.openclinica.bean.managestudy.StudyBean) ArrayList(java.util.ArrayList) StudyEventDefinitionBean(org.akaza.openclinica.bean.managestudy.StudyEventDefinitionBean) EventDefinitionCRFDAO(org.akaza.openclinica.dao.managestudy.EventDefinitionCRFDAO) StudyEventBean(org.akaza.openclinica.bean.managestudy.StudyEventBean) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) StudySubjectDAO(org.akaza.openclinica.dao.managestudy.StudySubjectDAO) Date(java.util.Date) DisplayStudyEventBean(org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean) StudySubjectBean(org.akaza.openclinica.bean.managestudy.StudySubjectBean) StudyEventDefinitionDAO(org.akaza.openclinica.dao.managestudy.StudyEventDefinitionDAO) StudyEventDAO(org.akaza.openclinica.dao.managestudy.StudyEventDAO) StudyDAO(org.akaza.openclinica.dao.managestudy.StudyDAO) EventCRFDAO(org.akaza.openclinica.dao.submit.EventCRFDAO)

Aggregations

DisplayStudyEventBean (org.akaza.openclinica.bean.managestudy.DisplayStudyEventBean)22 ArrayList (java.util.ArrayList)19 StudyEventBean (org.akaza.openclinica.bean.managestudy.StudyEventBean)18 EventCRFDAO (org.akaza.openclinica.dao.submit.EventCRFDAO)15 StudyEventDAO (org.akaza.openclinica.dao.managestudy.StudyEventDAO)13 StudyBean (org.akaza.openclinica.bean.managestudy.StudyBean)11 StudyEventDefinitionBean (org.akaza.openclinica.bean.managestudy.StudyEventDefinitionBean)11 StudySubjectBean (org.akaza.openclinica.bean.managestudy.StudySubjectBean)11 StudyDAO (org.akaza.openclinica.dao.managestudy.StudyDAO)11 StudyEventDefinitionDAO (org.akaza.openclinica.dao.managestudy.StudyEventDefinitionDAO)11 StudySubjectDAO (org.akaza.openclinica.dao.managestudy.StudySubjectDAO)11 DisplayEventCRFBean (org.akaza.openclinica.bean.submit.DisplayEventCRFBean)10 EventCRFBean (org.akaza.openclinica.bean.submit.EventCRFBean)10 EventDefinitionCRFDAO (org.akaza.openclinica.dao.managestudy.EventDefinitionCRFDAO)10 Date (java.util.Date)8 FormProcessor (org.akaza.openclinica.control.form.FormProcessor)7 DiscrepancyNoteBean (org.akaza.openclinica.bean.managestudy.DiscrepancyNoteBean)6 HashMap (java.util.HashMap)5 DiscrepancyNoteDAO (org.akaza.openclinica.dao.managestudy.DiscrepancyNoteDAO)5 DisplayEventDefinitionCRFBean (org.akaza.openclinica.bean.managestudy.DisplayEventDefinitionCRFBean)4