Examples with ConfigurationParameters org.akaza.openclinica.bean.odmbeans.ConfigurationParameters used on opensource projects

Example 1 with ConfigurationParameters

use of org.akaza.openclinica.bean.odmbeans.ConfigurationParameters in project OpenClinica by OpenClinica.

the class MetaDataReportBean method addStudyEventDef.

public void addStudyEventDef(boolean isStudy, String currentIndent) {
    StringBuffer xml = this.getXmlOutput();
    String indent = this.getIndent();
    ArrayList<StudyEventDefBean> seds = (ArrayList<StudyEventDefBean>) odmstudy.getMetaDataVersion().getStudyEventDefs();
    for (StudyEventDefBean sed : seds) {
        xml.append(currentIndent + "<StudyEventDef OID=\"" + StringEscapeUtils.escapeXml(sed.getOid()) + "\"  Name=\"" + StringEscapeUtils.escapeXml(sed.getName()) + "\" Repeating=\"" + sed.getRepeating() + "\" Type=\"" + sed.getType() + "\">");
        xml.append(nls);
        ArrayList<ElementRefBean> formRefs = (ArrayList<ElementRefBean>) sed.getFormRefs();
        for (ElementRefBean formRef : formRefs) {
            xml.append(currentIndent + indent + "<FormRef FormOID=\"" + StringEscapeUtils.escapeXml(formRef.getElementDefOID()) + "\" Mandatory=\"" + formRef.getMandatory() + "\">");
            xml.append(nls);
            ConfigurationParameters conf = formRef.getConfigurationParameters();
            if (conf != null) {
                xml.append(currentIndent + indent + indent + "<OpenClinica:ConfigurationParameters HideCRF=\"" + (conf.isHiddenCrf() ? "Yes" : "No") + "\" ParticipantForm=\"" + (conf.isParticipantForm() ? "Yes" : "No") + "\" AllowAnonymousSubmission=\"" + (conf.isAllowAnynymousSubmission() ? "Yes" : "No") + "\" SubmissionUrl=\"" + conf.getSubmissionUrl() + "\" Offline=\"" + (conf.isOffline() ? "Yes" : "No") + "\"/>");
                xml.append(nls);
                ArrayList<ElementRefBean> formLayoutRefs = (ArrayList<ElementRefBean>) formRef.getFormLayoutRefs();
                for (ElementRefBean formLayoutRef : formLayoutRefs) {
                    xml.append(currentIndent + indent + indent + "<OpenClinica:FormLayoutRef OID=\"" + StringEscapeUtils.escapeXml(formLayoutRef.getName()) + "\" IsDefaultVersion=\"" + (formLayoutRef.isDefaultVersion() ? "Yes" : "No") + "\"/>");
                    xml.append(nls);
                }
            }
            xml.append(currentIndent + indent + "</FormRef>");
            xml.append(nls);
        }
        // MR=416
        if ("oc1.3".equals(this.getODMVersion())) {
            this.addEventDefinitionDetails(sed.getEventDefinitionDetais(), currentIndent + indent);
        }
        xml.append(currentIndent + "</StudyEventDef>");
        xml.append(nls);
    }
}

Example 2 with ConfigurationParameters

use of org.akaza.openclinica.bean.odmbeans.ConfigurationParameters in project OpenClinica by OpenClinica.

the class OdmExtractDAO method getStudyEventAndFormMetaOC1_3.

public void getStudyEventAndFormMetaOC1_3(int parentStudyId, int studyId, MetaDataVersionBean metadata, String odmVersion, boolean isIncludedSite) {
    ArrayList<StudyEventDefBean> seds = (ArrayList<StudyEventDefBean>) metadata.getStudyEventDefs();
    ArrayList<FormDefBean> forms = (ArrayList<FormDefBean>) metadata.getFormDefs();
    for (StudyEventDefBean sed : seds) {
        List<ElementRefBean> formRefs = sed.getFormRefs();
        for (ElementRefBean formRef : formRefs) {
            ConfigurationParameters conf = new ConfigurationParameters();
            EventDefinitionCRFBean edc = getEventDefCRF(sed, formRef, studyId);
            CRFBean cBean = (CRFBean) crfdao.findByPK(edc.getCrfId());
            String crfPath = sed.getOid() + "." + cBean.getOid();
            conf = populateConfigurationParameters(edc, conf, crfPath);
            formRef.setConfigurationParameters(conf);
            int defaultVersionId = edc.getDefaultVersionId();
            formRef.setFormLayoutRefs(getFormLayoutRefs(formRef, defaultVersionId));
        }
    }
    HashMap<String, EventDefinitionDetailsBean> sedDetails = new HashMap<String, EventDefinitionDetailsBean>();
    HashMap<String, FormDetailsBean> formDetails = new HashMap<String, FormDetailsBean>();
    this.setStudyEventAndFormMetaOC1_3TypesExpected();
    logger.debug("Begin to execute GetStudyEventAndFormMetaOC1_3Sql");
    logger.debug("getStudyEventAndFormMetaOC1_3SQl= " + this.getStudyEventAndFormMetaOC1_3Sql(parentStudyId, studyId, isIncludedSite));
    ArrayList rows = this.select(this.getStudyEventAndFormMetaOC1_3Sql(parentStudyId, studyId, isIncludedSite));
    Iterator iter = rows.iterator();
    String sedOIDs = "";
    while (iter.hasNext()) {
        HashMap row = (HashMap) iter.next();
        Integer cvId = (Integer) row.get("crf_version_id");
        String sedOID = (String) row.get("definition_oid");
        String cvOID = (String) row.get("cv_oid");
        String sedDesc = (String) row.get("description");
        String category = (String) row.get("category");
        String cvDesc = (String) row.get("version_description");
        String notes = (String) row.get("revision_notes");
        String cOID = (String) row.get("crf_oid");
        String crfDescription = (String) row.get("crf_description");
        String nullValue = (String) row.get("null_values");
        Integer dvId = (Integer) row.get("default_version_id");
        Boolean pwdRequired = (Boolean) row.get("electronic_signature");
        Boolean doubleEntry = (Boolean) row.get("double_entry");
        Boolean hideCrf = (Boolean) row.get("hide_crf");
        Boolean participantForm = (Boolean) row.get("participant_form");
        Boolean allowAnonymousSubmission = (Boolean) row.get("allow_anonymous_submission");
        String submissionUrl = (String) row.get("submission_url");
        Integer sdvId = (Integer) row.get("source_data_verification_code");
        Boolean offline = (Boolean) row.get("active");
        if (sedDetails.containsKey(sedOID)) {
        } else {
            EventDefinitionDetailsBean sedDetail = new EventDefinitionDetailsBean();
            sedDetail.setOid(sedOID);
            sedDetail.setCategory(category);
            sedDetail.setDescription(sedDesc);
            sedDetails.put(sedOID, sedDetail);
        }
        if (formDetails.containsKey(cOID)) {
            FormDetailsBean formDetail = formDetails.get(cOID);
            PresentInEventDefinitionBean p = new PresentInEventDefinitionBean();
            p.setStudyEventOid(sedOID);
            p.setDoubleDataEntry(doubleEntry == false ? "No" : "Yes");
            p.setHideCrf(hideCrf == false ? "No" : "Yes");
            p.setParticipantForm(participantForm == false ? "No" : "Yes");
            p.setIsDefaultVersion(cvId.equals(dvId) ? "Yes" : "No");
            p.setNullValues(nullValue);
            p.setPasswordRequired(pwdRequired == false ? "No" : "Yes");
            p.setAllowAnonymousSubmission(allowAnonymousSubmission == false ? "No" : "Yes");
            p.setOffline((offline == false) ? "No" : "Yes");
            p.setSubmissionUrl(submissionUrl);
            p.setSourceDataVerification(SourceDataVerification.getByCode(sdvId > 0 ? sdvId : 3).getDescription());
            formDetail.getPresentInEventDefinitions().add(p);
        } else {
            FormDetailsBean formDetail = new FormDetailsBean();
            formDetail.setOid(cOID);
            formDetail.setRevisionNotes(notes);
            formDetail.setParentFormOid(cOID);
            formDetail.setVersionDescription(cvDesc);
            formDetail.setDescription(crfDescription);
            // ArrayList sectionBeansRows = this.select(this.getSectionDetails(cvOID),cvId);
            formDetail = setSectionBean(formDetail, cvId);
            PresentInEventDefinitionBean p = new PresentInEventDefinitionBean();
            p.setStudyEventOid(sedOID);
            p.setDoubleDataEntry(doubleEntry == false ? "No" : "Yes");
            p.setHideCrf(hideCrf == false ? "No" : "Yes");
            p.setParticipantForm(participantForm == false ? "No" : "Yes");
            p.setIsDefaultVersion(cvId.equals(dvId) ? "Yes" : "No");
            p.setNullValues(nullValue);
            p.setPasswordRequired(pwdRequired == false ? "No" : "Yes");
            p.setAllowAnonymousSubmission(allowAnonymousSubmission == false ? "No" : "Yes");
            p.setOffline((offline == false) ? "No" : "Yes");
            p.setSubmissionUrl(submissionUrl);
            p.setSourceDataVerification(SourceDataVerification.getByCode(sdvId > 0 ? sdvId : 3).getDescription());
            formDetail.getPresentInEventDefinitions().add(p);
            formDetails.put(cOID, formDetail);
        }
    }
    for (StudyEventDefBean sedef : seds) {
        sedef.setEventDefinitionDetais(sedDetails.get(sedef.getOid()));
    }
    for (FormDefBean formdef : forms) {
        List<ElementRefBean> formLayoutRefs = getFormLayoutRefs(formdef);
        formdef.setFormLayoutRefs(formLayoutRefs);
        formdef.setFormDetails(formDetails.get(formdef.getOid()));
    }
}