Examples with FileProperties org.akaza.openclinica.bean.rule.FileProperties used on opensource projects

Example 1 with FileProperties

use of org.akaza.openclinica.bean.rule.FileProperties in project OpenClinica by OpenClinica.

the class OpenRosaSubmissionController method doFieldDeletion.

/**
     * @api {post} /pages/api/v2/editform/:studyOid/fieldsubmission Submit form data
     * @apiName doSubmission
     * @apiPermission admin
     * @apiVersion 3.8.0
     * @apiParam {String} studyOid Study Oid.
     * @apiParam {String} ecid Key that will be used to look up subject context information while processing submission.
     * @apiGroup Form
     * @apiDescription Submits the data from a completed form.
     */
@RequestMapping(value = "/{studyOID}/fieldsubmission", method = RequestMethod.DELETE)
public ResponseEntity<String> doFieldDeletion(HttpServletRequest request, HttpServletResponse response, @PathVariable("studyOID") String studyOID, @RequestParam(FORM_CONTEXT) String ecid) {
    logger.info("Processing xform field deletion.");
    HashMap<String, String> subjectContext = null;
    Locale locale = LocaleResolver.getLocale(request);
    DataBinder dataBinder = new DataBinder(null);
    Errors errors = dataBinder.getBindingResult();
    Study study = studyDao.findByOcOID(studyOID);
    String requestBody = null;
    String instanceId = null;
    HashMap<String, String> map = new HashMap();
    ArrayList<HashMap> listOfUploadFilePaths = new ArrayList();
    try {
        // Verify Study is allowed to submit
        if (!mayProceed(study)) {
            logger.info("Field Deletions to the study not allowed.  Aborting field submission.");
            return new ResponseEntity<String>(HttpStatus.NOT_ACCEPTABLE);
        }
        String dir = getAttachedFilePath(studyOID);
        FileProperties fileProperties = new FileProperties();
        DiskFileItemFactory factory = new DiskFileItemFactory();
        ServletFileUpload upload = new ServletFileUpload(factory);
        upload.setFileSizeMax(fileProperties.getFileSizeMax());
        List<FileItem> items = upload.parseRequest(request);
        for (FileItem item : items) {
            if (item.getFieldName().equals("instance_id")) {
                instanceId = item.getString();
            } else if (item.getFieldName().equals("xml_submission_fragment_file")) {
                requestBody = item.getString("UTF-8");
            } else if (item.getContentType() != null) {
                if (!new File(dir).exists())
                    new File(dir).mkdirs();
                File file = processUploadedFile(item, dir);
                map.put(item.getFieldName(), file.getPath());
            }
        }
        listOfUploadFilePaths.add(map);
        if (instanceId == null) {
            logger.info("Field Submissions to the study not allowed without a valid instanceId.  Aborting field submission.");
            return new ResponseEntity<String>(HttpStatus.NOT_ACCEPTABLE);
        }
        // Load user context from ecid
        PFormCache cache = PFormCache.getInstance(context);
        subjectContext = cache.getSubjectContext(ecid);
        // Execute save as Hibernate transaction to avoid partial imports
        openRosaSubmissionService.processFieldSubmissionRequest(study, subjectContext, instanceId, requestBody, errors, locale, listOfUploadFilePaths, SubmissionContainer.FieldRequestTypeEnum.DELETE_FIELD);
    } catch (Exception e) {
        logger.error("Exception while processing xform submission.");
        logger.error(e.getMessage());
        logger.error(ExceptionUtils.getStackTrace(e));
        if (!errors.hasErrors()) {
            // Send a failure response
            logger.info("Submission caused internal error.  Sending error response.");
            return new ResponseEntity<String>(HttpStatus.INTERNAL_SERVER_ERROR);
        }
    }
    if (!errors.hasErrors()) {
        // JsonLog submission with Participate
        if (isParticipantSubmission(subjectContext))
            notifier.notify(studyOID, subjectContext);
        logger.info("Completed xform field submission. Sending successful response");
        String responseMessage = "<OpenRosaResponse xmlns=\"http://openrosa.org/http/response\">" + "<message>success</message>" + "</OpenRosaResponse>";
        return new ResponseEntity<String>(responseMessage, HttpStatus.CREATED);
    } else {
        logger.info("Field Submission contained errors. Sending error response");
        return new ResponseEntity<String>(HttpStatus.NOT_ACCEPTABLE);
    }
}

Example 2 with FileProperties

use of org.akaza.openclinica.bean.rule.FileProperties in project OpenClinica by OpenClinica.

the class OpenRosaSubmissionController method doFieldSubmission.

/**
     * @api {post} /pages/api/v2/editform/:studyOid/fieldsubmission Submit form data
     * @apiName doSubmission
     * @apiPermission admin
     * @apiVersion 3.8.0
     * @apiParam {String} studyOid Study Oid.
     * @apiParam {String} ecid Key that will be used to look up subject context information while processing submission.
     * @apiGroup Form
     * @apiDescription Submits the data from a completed form.
     */
@RequestMapping(value = "/{studyOID}/fieldsubmission", method = RequestMethod.POST)
public ResponseEntity<String> doFieldSubmission(HttpServletRequest request, HttpServletResponse response, @PathVariable("studyOID") String studyOID, @RequestParam(FORM_CONTEXT) String ecid) {
    long millis = System.currentTimeMillis();
    logger.info("Processing xform field submission.");
    HashMap<String, String> subjectContext = null;
    Locale locale = LocaleResolver.getLocale(request);
    DataBinder dataBinder = new DataBinder(null);
    Errors errors = dataBinder.getBindingResult();
    Study study = studyDao.findByOcOID(studyOID);
    String requestBody = null;
    String instanceId = null;
    HashMap<String, String> map = new HashMap();
    ArrayList<HashMap> listOfUploadFilePaths = new ArrayList();
    try {
        // Verify Study is allowed to submit
        if (!mayProceed(study)) {
            logger.info("Field Submissions to the study not allowed.  Aborting field submission.");
            return new ResponseEntity<String>(HttpStatus.NOT_ACCEPTABLE);
        }
        if (ServletFileUpload.isMultipartContent(request)) {
            String dir = getAttachedFilePath(studyOID);
            FileProperties fileProperties = new FileProperties();
            DiskFileItemFactory factory = new DiskFileItemFactory();
            ServletFileUpload upload = new ServletFileUpload(factory);
            upload.setFileSizeMax(fileProperties.getFileSizeMax());
            List<FileItem> items = upload.parseRequest(request);
            for (FileItem item : items) {
                if (item.getFieldName().equals("instance_id")) {
                    instanceId = item.getString();
                } else if (item.getFieldName().equals("xml_submission_fragment_file")) {
                    requestBody = item.getString("UTF-8");
                } else if (item.getContentType() != null) {
                    if (!new File(dir).exists())
                        new File(dir).mkdirs();
                    File file = processUploadedFile(item, dir);
                    map.put(item.getFieldName(), file.getPath());
                }
            }
            listOfUploadFilePaths.add(map);
        }
        if (instanceId == null) {
            logger.info("Field Submissions to the study not allowed without a valid instanceId.  Aborting field submission.");
            return new ResponseEntity<String>(HttpStatus.NOT_ACCEPTABLE);
        }
        // Load user context from ecid
        PFormCache cache = PFormCache.getInstance(context);
        subjectContext = cache.getSubjectContext(ecid);
        // Execute save as Hibernate transaction to avoid partial imports
        openRosaSubmissionService.processFieldSubmissionRequest(study, subjectContext, instanceId, requestBody, errors, locale, listOfUploadFilePaths, SubmissionContainer.FieldRequestTypeEnum.FORM_FIELD);
    } catch (Exception e) {
        logger.error("Exception while processing xform submission.");
        logger.error(e.getMessage());
        logger.error(ExceptionUtils.getStackTrace(e));
        if (!errors.hasErrors()) {
            // Send a failure response
            logger.info("Submission caused internal error.  Sending error response.");
            return new ResponseEntity<String>(HttpStatus.INTERNAL_SERVER_ERROR);
        }
    }
    if (!errors.hasErrors()) {
        // JsonLog submission with Participate
        if (isParticipantSubmission(subjectContext))
            notifier.notify(studyOID, subjectContext);
        logger.info("Completed xform field submission. Sending successful response");
        String responseMessage = "<OpenRosaResponse xmlns=\"http://openrosa.org/http/response\">" + "<message>success</message>" + "</OpenRosaResponse>";
        long endMillis = System.currentTimeMillis();
        logger.info("Total time *********** " + (endMillis - millis));
        return new ResponseEntity<String>(responseMessage, HttpStatus.CREATED);
    } else {
        logger.info("Field Submission contained errors. Sending error response");
        return new ResponseEntity<String>(HttpStatus.NOT_ACCEPTABLE);
    }
}

Example 3 with FileProperties

use of org.akaza.openclinica.bean.rule.FileProperties in project OpenClinica by OpenClinica.

the class OpenRosaSubmissionController method doSubmission.

/**
 * @api {post} /pages/api/v1/editform/:studyOid/submission Submit form data
 * @apiName doSubmission
 * @apiPermission admin
 * @apiVersion 3.8.0
 * @apiParam {String} studyOid Study Oid.
 * @apiParam {String} ecid Key that will be used to look up subject context information while processing submission.
 * @apiGroup Form
 * @apiDescription Submits the data from a completed form.
 */
@RequestMapping(value = "/{studyOID}/submission", method = RequestMethod.POST)
public ResponseEntity<String> doSubmission(HttpServletRequest request, HttpServletResponse response, @PathVariable("studyOID") String studyOID, @RequestParam(FORM_CONTEXT) String ecid) {
    logger.info("Processing xform submission.");
    HashMap<String, String> subjectContext = null;
    Locale locale = LocaleResolver.getLocale(request);
    DataBinder dataBinder = new DataBinder(null);
    Errors errors = dataBinder.getBindingResult();
    Study study = studyDao.findByOcOID(studyOID);
    String requestBody = null;
    HashMap<String, String> map = new HashMap();
    ArrayList<HashMap> listOfUploadFilePaths = new ArrayList();
    try {
        // Verify Study is allowed to submit
        if (!mayProceed(studyOID)) {
            logger.info("Submissions to the study not allowed.  Aborting submission.");
            return new ResponseEntity<String>(org.springframework.http.HttpStatus.NOT_ACCEPTABLE);
        }
        if (ServletFileUpload.isMultipartContent(request)) {
            String dir = getAttachedFilePath(studyOID);
            FileProperties fileProperties = new FileProperties();
            DiskFileItemFactory factory = new DiskFileItemFactory();
            ServletFileUpload upload = new ServletFileUpload(factory);
            upload.setFileSizeMax(fileProperties.getFileSizeMax());
            List<FileItem> items = upload.parseRequest(request);
            for (FileItem item : items) {
                if (item.getContentType() != null && !item.getFieldName().equals("xml_submission_file")) {
                    if (!new File(dir).exists())
                        new File(dir).mkdirs();
                    File file = processUploadedFile(item, dir);
                    map.put(item.getFieldName(), file.getPath());
                } else if (item.getFieldName().equals("xml_submission_file")) {
                    requestBody = item.getString("UTF-8");
                }
            }
            listOfUploadFilePaths.add(map);
        } else {
            requestBody = IOUtils.toString(request.getInputStream(), "UTF-8");
        }
        // Load user context from ecid
        PFormCache cache = PFormCache.getInstance(context);
        subjectContext = cache.getSubjectContext(ecid);
        // Execute save as Hibernate transaction to avoid partial imports
        openRosaSubmissionService.processRequest(study, subjectContext, requestBody, errors, locale, listOfUploadFilePaths);
    } catch (Exception e) {
        logger.error("Exception while processing xform submission.");
        logger.error(e.getMessage());
        logger.error(ExceptionUtils.getStackTrace(e));
        if (!errors.hasErrors()) {
            // Send a failure response
            logger.info("Submission caused internal error.  Sending error response.");
            return new ResponseEntity<String>(org.springframework.http.HttpStatus.INTERNAL_SERVER_ERROR);
        }
    }
    if (!errors.hasErrors()) {
        // Log submission with Participate
        notifier.notify(studyOID, subjectContext);
        logger.info("Completed xform submission. Sending successful response");
        String responseMessage = "<OpenRosaResponse xmlns=\"http://openrosa.org/http/response\">" + "<message>success</message>" + "</OpenRosaResponse>";
        return new ResponseEntity<String>(responseMessage, org.springframework.http.HttpStatus.CREATED);
    } else {
        logger.info("Submission contained errors. Sending error response");
        return new ResponseEntity<String>(org.springframework.http.HttpStatus.NOT_ACCEPTABLE);
    }
}