Examples with FormProcessor org.akaza.openclinica.control.form.FormProcessor used on opensource projects

Example 11 with FormProcessor

use of org.akaza.openclinica.control.form.FormProcessor in project OpenClinica by OpenClinica.

the class UpdateStudyServlet method updateStudy2.

/**
     * Updates the study bean with inputs from second section
     * 
     * @param request
     * @return true if study type is Interventional, otherwise false
     */
private boolean updateStudy2() {
    FormProcessor fp = new FormProcessor(request);
    StudyBean newStudy = (StudyBean) session.getAttribute("newStudy");
    // this is not fully supported yet, because the system will not handle
    // studies which are pending
    // or private...
    newStudy.setStatus(Status.get(fp.getInt("statusId")));
    newStudy.setProtocolDateVerification(fp.getDate(INPUT_VER_DATE));
    newStudy.setDatePlannedStart(fp.getDate(INPUT_START_DATE));
    if (StringUtil.isBlank(fp.getString(INPUT_END_DATE))) {
        newStudy.setDatePlannedEnd(null);
    } else {
        newStudy.setDatePlannedEnd(fp.getDate(INPUT_END_DATE));
    }
    newStudy.setPhase(fp.getString("phase"));
    if (fp.getInt("genetic") == 1) {
        newStudy.setGenetic(true);
    } else {
        newStudy.setGenetic(false);
    }
    session.setAttribute("newStudy", newStudy);
    String interventional = resadmin.getString("interventional");
    return interventional.equalsIgnoreCase(newStudy.getProtocolType());
}

Example 12 with FormProcessor

use of org.akaza.openclinica.control.form.FormProcessor in project OpenClinica by OpenClinica.

the class DeleteUserServlet method processRequest.

@Override
protected void processRequest() throws Exception {
    UserAccountDAO udao = new UserAccountDAO(sm.getDataSource());
    FormProcessor fp = new FormProcessor(request);
    int userId = fp.getInt(ARG_USERID);
    int action = fp.getInt(ARG_ACTION);
    UserAccountBean u = (UserAccountBean) udao.findByPK(userId);
    String message;
    if (!u.isActive()) {
        message = respage.getString("the_specified_user_not_exits");
    } else if (!EntityAction.contains(action)) {
        message = respage.getString("the_specified_action_on_the_user_is_invalid");
    } else if (!EntityAction.get(action).equals(EntityAction.DELETE) && !EntityAction.get(action).equals(EntityAction.RESTORE)) {
        message = respage.getString("the_specified_action_is_not_allowed");
    } else {
        EntityAction desiredAction = EntityAction.get(action);
        u.setUpdater(ub);
        if (desiredAction.equals(EntityAction.DELETE)) {
            udao.delete(u);
            if (udao.isQuerySuccessful()) {
                message = respage.getString("the_user_has_been_removed_successfully");
            // YW 07-31-2007 << for feature that deletion doesn't need
            // email the deleted user.
            /*
                     * //YW 07-26-2007 << catch exception (eg. timeout) and
                     * inform users. try { sendDeleteEmail(u); } catch
                     * (Exception e) { message += " However, there has been an
                     * error sending the user an email regarding this
                     * deletion."; }
                     */
            // YW >>
            } else {
                message = respage.getString("the_user_could_not_be_deleted_due_database_error");
            }
        } else {
            SecurityManager sm = (SecurityManager) SpringServletAccess.getApplicationContext(context).getBean("securityManager");
            String password = sm.genPassword();
            String passwordHash = sm.encrytPassword(password, getUserDetails());
            if (!u.isLdapUser()) {
                u.setPasswd(passwordHash);
                u.setPasswdTimestamp(null);
            }
            udao.restore(u);
            if (udao.isQuerySuccessful()) {
                message = respage.getString("the_user_has_been_restored");
                try {
                    if (!u.isLdapUser()) {
                        sendRestoreEmail(u, password);
                    }
                } catch (Exception e) {
                    message += respage.getString("however_was_error_sending_user_email_regarding");
                }
            } else {
                message = respage.getString("the_user_could_not_be_deleted_due_database_error");
            }
        }
    }
    addPageMessage(message);
    forwardPage(Page.LIST_USER_ACCOUNTS_SERVLET);
}

Example 13 with FormProcessor

use of org.akaza.openclinica.control.form.FormProcessor in project OpenClinica by OpenClinica.

the class DownloadVersionSpreadSheetServlet method processRequest.

@Override
public void processRequest() throws Exception {
    String dir = SQLInitServlet.getField("filePath") + "crf" + File.separator + "new" + File.separator;
    // YW 09-10-2007 << Now CRF_Design_Template_v2.xls is located at
    // $CATALINA_HOME/webapps/OpenClinica-instanceName/properties
    FormProcessor fp = new FormProcessor(request);
    String crfIdString = fp.getString(CRF_ID);
    int crfVersionId = fp.getInt(CRF_VERSION_ID);
    CRFVersionDAO cvdao = new CRFVersionDAO(sm.getDataSource());
    CRFVersionBean version = (CRFVersionBean) cvdao.findByPK(crfVersionId);
    boolean isTemplate = fp.getBoolean("template");
    String excelFileName = crfIdString + version.getOid() + ".xls";
    // aha, what if it's the old style? next line is for backwards compat,
    // tbh 07/2008
    File excelFile = null;
    String oldExcelFileName = crfIdString + version.getName() + ".xls";
    if (isTemplate) {
        // excelFile = new File(dir + CRF_VERSION_TEMPLATE);
        excelFile = getCoreResources().getFile(CRF_VERSION_TEMPLATE, "crf" + File.separator + "original" + File.separator);
        excelFileName = CRF_VERSION_TEMPLATE;
    // FileOutputStream fos = new FileOutputStream(excelFile);
    // IOUtils.copy(getCoreResources().getInputStream(CRF_VERSION_TEMPLATE), fos);
    // IOUtils.closeQuietly(fos);
    } else {
        excelFile = new File(dir + excelFileName);
        // backwards compat
        File oldExcelFile = new File(dir + oldExcelFileName);
        if (oldExcelFile.exists() && oldExcelFile.length() > 0) {
            if (!excelFile.exists() || excelFile.length() <= 0) {
                // if the old name exists and the new name does not...
                excelFile = oldExcelFile;
                excelFileName = oldExcelFileName;
            }
        }
    }
    logger.info("looking for : " + excelFile.getName());
    if (!excelFile.exists() || excelFile.length() <= 0) {
        addPageMessage(respage.getString("the_excel_is_not_available_on_server_contact"));
        forwardPage(Page.CRF_LIST_SERVLET);
    } else {
        response.setHeader("Content-disposition", "attachment; filename=\"" + excelFileName + "\";");
        response.setContentType("application/vnd.ms-excel");
        response.setHeader("Pragma", "public");
        ServletOutputStream op = response.getOutputStream();
        DataInputStream in = null;
        try {
            response.setContentType("application/vnd.ms-excel");
            response.setHeader("Pragma", "public");
            response.setContentLength((int) excelFile.length());
            byte[] bbuf = new byte[(int) excelFile.length()];
            in = new DataInputStream(new FileInputStream(excelFile));
            int length;
            while ((in != null) && ((length = in.read(bbuf)) != -1)) {
                op.write(bbuf, 0, length);
            }
            in.close();
            op.flush();
            op.close();
        } catch (Exception ee) {
            ee.printStackTrace();
        } finally {
            if (in != null) {
                in.close();
            }
            if (op != null) {
                op.close();
            }
        }
    }
}

Example 14 with FormProcessor

use of org.akaza.openclinica.control.form.FormProcessor in project OpenClinica by OpenClinica.

the class EditStudyUserRoleServlet method processRequest.

@Override
protected void processRequest() throws Exception {
    UserAccountDAO udao = new UserAccountDAO(sm.getDataSource());
    FormProcessor fp = new FormProcessor(request);
    int studyId = fp.getInt(ARG_STUDY_ID);
    String uName = fp.getString(ARG_USER_NAME);
    StudyUserRoleBean studyUserRole = udao.findRoleByUserNameAndStudyId(uName, studyId);
    StudyDAO sdao = new StudyDAO(sm.getDataSource());
    StudyBean sb = (StudyBean) sdao.findByPK(studyUserRole.getStudyId());
    if (sb != null) {
        studyUserRole.setStudyName(sb.getName());
    }
    if (!studyUserRole.isActive()) {
        String message = respage.getString("the_user_has_no_role_in_study");
        addPageMessage(message);
        forwardPage(Page.LIST_USER_ACCOUNTS_SERVLET);
    } else {
        Map roleMap = new LinkedHashMap();
        for (Iterator it = getRoles().iterator(); it.hasNext(); ) {
            Role role = (Role) it.next();
            roleMap.put(role.getId(), role.getDescription());
        }
        roleMap = new LinkedHashMap();
        ResourceBundle resterm = org.akaza.openclinica.i18n.util.ResourceBundleProvider.getTermsBundle();
        StudyBean study = (StudyBean) sdao.findByPK(studyUserRole.getStudyId());
        if (study.getParentStudyId() == 0) {
            for (Iterator it = getRoles().iterator(); it.hasNext(); ) {
                Role role = (Role) it.next();
                switch(role.getId()) {
                    case 2:
                        roleMap.put(role.getId(), resterm.getString("Study_Coordinator").trim());
                        break;
                    case 3:
                        roleMap.put(role.getId(), resterm.getString("Study_Director").trim());
                        break;
                    case 4:
                        roleMap.put(role.getId(), resterm.getString("Investigator").trim());
                        break;
                    case 5:
                        roleMap.put(role.getId(), resterm.getString("Data_Entry_Person").trim());
                        break;
                    case 6:
                        roleMap.put(role.getId(), resterm.getString("Monitor").trim());
                        break;
                    default:
                }
            }
        } else {
            for (Iterator it = getRoles().iterator(); it.hasNext(); ) {
                Role role = (Role) it.next();
                switch(role.getId()) {
                    //                            break;
                    case 4:
                        roleMap.put(role.getId(), resterm.getString("site_investigator").trim());
                        break;
                    case 5:
                        roleMap.put(role.getId(), resterm.getString("site_Data_Entry_Person").trim());
                        break;
                    case 6:
                        roleMap.put(role.getId(), resterm.getString("site_monitor").trim());
                        break;
                    case 7:
                        roleMap.put(role.getId(), resterm.getString("site_Data_Entry_Person2").trim());
                        break;
                    default:
                }
            }
        }
        if (study.getParentStudyId() > 0) {
            roleMap.remove(Role.COORDINATOR.getId());
            roleMap.remove(Role.STUDYDIRECTOR.getId());
        }
        // send the user to the right place..
        if (!fp.isSubmitted()) {
            request.setAttribute("userName", uName);
            request.setAttribute("studyUserRole", studyUserRole);
            request.setAttribute("roles", roleMap);
            request.setAttribute("chosenRoleId", new Integer(studyUserRole.getRole().getId()));
            forwardPage(Page.EDIT_STUDY_USER_ROLE);
        } else // process the form
        {
            Validator v = new Validator(request);
            v.addValidation(INPUT_ROLE, Validator.IS_VALID_TERM, TermType.ROLE);
            HashMap errors = v.validate();
            if (errors.isEmpty()) {
                int roleId = fp.getInt(INPUT_ROLE);
                Role r = Role.get(roleId);
                studyUserRole.setRoleName(r.getName());
                studyUserRole.setUpdater(ub);
                udao.updateStudyUserRole(studyUserRole, uName);
                String message = respage.getString("the_user_in_study_has_been_updated");
                addPageMessage(message);
                forwardPage(Page.LIST_USER_ACCOUNTS_SERVLET);
            } else {
                String message = respage.getString("the_role_choosen_was_invalid_choose_another");
                addPageMessage(message);
                request.setAttribute("userName", uName);
                request.setAttribute("studyUserRole", studyUserRole);
                request.setAttribute("chosenRoleId", new Integer(fp.getInt(INPUT_ROLE)));
                request.setAttribute("roles", roleMap);
                forwardPage(Page.EDIT_STUDY_USER_ROLE);
            }
        }
    }
}

Example 15 with FormProcessor

use of org.akaza.openclinica.control.form.FormProcessor in project OpenClinica by OpenClinica.

the class BatchCRFMigrationServlet method processRequest.

@SuppressWarnings({ "rawtypes", "unchecked" })
@Override
public void processRequest() throws Exception {
    FormProcessor fp = new FormProcessor(request);
    ArrayList<CRFVersionBean> crfVersionList = null;
    ArrayList<FormLayoutBean> formLayoutList = null;
    ArrayList<StudyEventDefinitionBean> eventList = null;
    ArrayList<StudyBean> siteList = null;
    // checks which module the requests are from, manage or admin
    String module = fp.getString(MODULE);
    request.setAttribute(MODULE, module);
    int crfId = fp.getInt(CRF_ID);
    if (crfId == 0) {
        addPageMessage(respage.getString("please_choose_a_CRF_to_view"));
        forwardPage(Page.CRF_LIST);
    } else {
        CRFDAO cdao = new CRFDAO(sm.getDataSource());
        // CRFVersionDAO vdao = new CRFVersionDAO(sm.getDataSource());
        FormLayoutDAO fldao = new FormLayoutDAO(sm.getDataSource());
        CRFBean crf = (CRFBean) cdao.findByPK(crfId);
        request.setAttribute("crfName", crf.getName());
        // ArrayList<CRFVersionBean> versions = (ArrayList<CRFVersionBean>) vdao.findAllByCRF(crfId);
        ArrayList<FormLayoutBean> formLayouts = (ArrayList<FormLayoutBean>) fldao.findAllByCRF(crfId);
        crfVersionList = new ArrayList<CRFVersionBean>();
        formLayoutList = new ArrayList<FormLayoutBean>();
        for (FormLayoutBean version : formLayouts) {
            if (version.getStatus().isAvailable())
                formLayoutList.add(version);
        }
        // for (CRFVersionBean version : versions) {
        // if (version.getStatus().isAvailable())
        // crfVersionList.add(version);
        // }
        // crf.setVersions(crfVersionList);
        crf.setFormLayouts(formLayoutList);
        ArrayList<StudyBean> listOfSites = (ArrayList<StudyBean>) sdao().findAllByParent(currentStudy.getId());
        siteList = new ArrayList<StudyBean>();
        StudyBean studyBean = new StudyBean();
        studyBean.setOid(currentStudy.getOid());
        studyBean.setName(resterm.getString("Study_Level_Subjects_Only"));
        siteList.add(studyBean);
        for (StudyBean s : listOfSites) {
            if (s.getStatus().isAvailable()) {
                siteList.add(s);
            }
        }
        ArrayList<StudyEventDefinitionBean> listOfDefn = seddao().findAllByStudy(currentStudy);
        eventList = new ArrayList<StudyEventDefinitionBean>();
        for (StudyEventDefinitionBean d : listOfDefn) {
            if (d.getStatus().isAvailable()) {
                eventList.add(d);
            }
        }
        // if coming from change crf version -> display message
        String crfVersionChangeMsg = fp.getString("isFromCRFVersionBatchChange");
        if (crfVersionChangeMsg != null && !crfVersionChangeMsg.equals("")) {
            addPageMessage(crfVersionChangeMsg);
        }
        request.setAttribute("study", currentStudy);
        request.setAttribute("siteList", siteList);
        request.setAttribute("eventList", eventList);
        request.setAttribute(CRF, crf);
        forwardPage(Page.BATCH_CRF_MIGRATION);
    }
}