Examples with StudyInfoPanel org.akaza.openclinica.view.StudyInfoPanel used on opensource projects

Example 1 with StudyInfoPanel

use of org.akaza.openclinica.view.StudyInfoPanel in project OpenClinica by OpenClinica.

the class SetUpStudyRole method setUp.

public void setUp(HttpSession httpSession, UserAccountBean userAccountBean) {
    StudyUserRoleBean currentRole = new StudyUserRoleBean();
    StudyBean currentStudy = new StudyBean();
    StudyInfoPanel panel = new StudyInfoPanel();
    StudyDAO sdao = new StudyDAO(dataSource);
    if (userAccountBean.getId() > 0 && userAccountBean.getActiveStudyId() > 0) {
        StudyParameterValueDAO spvdao = new StudyParameterValueDAO(dataSource);
        currentStudy = (StudyBean) sdao.findByPK(userAccountBean.getActiveStudyId());
        ArrayList studyParameters = spvdao.findParamConfigByStudy(currentStudy);
        currentStudy.setStudyParameters(studyParameters);
        StudyConfigService scs = new StudyConfigService(dataSource);
        if (currentStudy.getParentStudyId() <= 0) {
            // top study
            scs.setParametersForStudy(currentStudy);
        } else {
            // YW <<
            currentStudy.setParentStudyName(((StudyBean) sdao.findByPK(currentStudy.getParentStudyId())).getName());
            // YW >>
            scs.setParametersForSite(currentStudy);
        }
        // set up the panel here, tbh
        panel.reset();
        /*
            * panel.setData("Study", currentStudy.getName());
            * panel.setData("Summary", currentStudy.getSummary());
            * panel.setData("Start Date",
            * sdf.format(currentStudy.getDatePlannedStart()));
            * panel.setData("End Date",
            * sdf.format(currentStudy.getDatePlannedEnd()));
            * panel.setData("Principal Investigator",
            * currentStudy.getPrincipalInvestigator());
            */
        httpSession.setAttribute(STUDY_INFO_PANEL, panel);
    } else {
        currentStudy = new StudyBean();
    }
    httpSession.setAttribute("study", currentStudy);
    // restored
    if (currentStudy.getParentStudyId() > 0) {
        currentStudy.setParentStudyName(((StudyBean) sdao.findByPK(currentStudy.getParentStudyId())).getName());
    }
    if (currentStudy.getParentStudyId() > 0) {
        /*The Role decription will be set depending on whether the user logged in at
       study lever or site level. issue-2422*/
        List roles = Role.toArrayList();
        for (Iterator it = roles.iterator(); it.hasNext(); ) {
            Role role = (Role) it.next();
            switch(role.getId()) {
                case 2:
                    role.setDescription("site_Study_Coordinator");
                    break;
                case 3:
                    role.setDescription("site_Study_Director");
                    break;
                case 4:
                    role.setDescription("site_investigator");
                    break;
                case 5:
                    role.setDescription("site_Data_Entry_Person");
                    break;
                case 6:
                    role.setDescription("site_monitor");
                    break;
                case 7:
                    role.setDescription("site_Data_Entry_Person2");
                    break;
                default:
            }
        }
    } else {
        /*If the current study is a site, we will change the role description. issue-2422*/
        List roles = Role.toArrayList();
        for (Iterator it = roles.iterator(); it.hasNext(); ) {
            Role role = (Role) it.next();
            switch(role.getId()) {
                case 2:
                    role.setDescription("Study_Coordinator");
                    break;
                case 3:
                    role.setDescription("Study_Director");
                    break;
                case 4:
                    role.setDescription("investigator");
                    break;
                case 5:
                    role.setDescription("Data_Entry_Person");
                    break;
                case 6:
                    role.setDescription("monitor");
                    break;
                default:
            }
        }
    }
    if (currentRole.getId() <= 0) {
        // kept as "invalid" -- YW 06-21-2007
        if (userAccountBean.getId() > 0 && currentStudy.getId() > 0 && !currentStudy.getStatus().getName().equals("removed")) {
            currentRole = userAccountBean.getRoleByStudy(currentStudy.getId());
            if (currentStudy.getParentStudyId() > 0) {
                // Checking if currentStudy has been removed or not will
                // ge good enough -- YW 10-17-2007
                StudyUserRoleBean roleInParent = userAccountBean.getRoleByStudy(currentStudy.getParentStudyId());
                // inherited role from parent study, pick the higher
                // role
                currentRole.setRole(Role.max(currentRole.getRole(), roleInParent.getRole()));
            }
        // logger.info("currentRole:" + currentRole.getRoleName());
        } else {
            currentRole = new StudyUserRoleBean();
        }
        httpSession.setAttribute("userRole", currentRole);
    } else // active study has been removed.
    if (currentRole.getId() > 0 && (currentStudy.getStatus().equals(Status.DELETED) || currentStudy.getStatus().equals(Status.AUTO_DELETED))) {
        currentRole.setRole(Role.INVALID);
        currentRole.setStatus(Status.DELETED);
        httpSession.setAttribute("userRole", currentRole);
    }
}

Example 2 with StudyInfoPanel

use of org.akaza.openclinica.view.StudyInfoPanel in project OpenClinica by OpenClinica.

the class SecureController method forwardPage.

/**
 * <P>
 * Forwards to a jsp page. Additions to the forwardPage() method involve checking the session for the bread crumb trail
 * and setting it, if necessary. Setting it here allows the developer to only have to update the
 * <code>BreadcrumbTrail</code> class.
 *
 * @param jspPage The page to go to.
 * @param checkTrail The command to check for, and set a trail in the session.
 */
protected void forwardPage(Page jspPage, boolean checkTrail) {
    Page page1 = Page.valueOf(jspPage.name());
    String temp;
    // YW 10-03-2007 <<
    response.setHeader("Cache-Control", "no-cache");
    response.setHeader("Pragma", "no-cache");
    response.setDateHeader("Expires", -1);
    response.setHeader("Cache-Control", "no-store");
    if (request.getAttribute(POP_UP_URL) == null) {
        request.setAttribute(POP_UP_URL, "");
    }
    try {
        // Added 01/19/2005 for breadcrumbs, tbh
        if (checkTrail) {
            BreadcrumbTrail bt = new BreadcrumbTrail();
            if (session != null) {
                // added bu jxu, fixed bug for log out
                /*    ArrayList trail = (ArrayList) session.getAttribute("trail");
                    if (trail == null) {
                        trail = bt.generateTrail(jspPage, request);
                    } else {
                        bt.setTrail(trail);
                        trail = bt.generateTrail(jspPage, request);
                    }
                    session.setAttribute("trail", trail);*/
                panel = (StudyInfoPanel) session.getAttribute(STUDY_INFO_PANEL);
                if (panel == null) {
                    panel = new StudyInfoPanel();
                    panel.setData(jspPage, session, request);
                } else {
                    panel.setData(jspPage, session, request);
                }
                session.setAttribute(STUDY_INFO_PANEL, panel);
            }
        // we are also using checkTrail to update the panel, tbh
        // 01/31/2005
        }
        temp = page1.getFileName();
        // above added 01/19/2005, tbh
        context.getRequestDispatcher(temp).forward(request, response);
    } catch (Exception se) {
        /*            if ("View Notes".equals(jspPage.getTitle())) {
                String viewNotesURL = jspPage.getFileName();
                if (viewNotesURL != null && viewNotesURL.contains("listNotes_p_=")) {
                    String[] ps = viewNotesURL.split("listNotes_p_=");
                    String t = ps[1].split("&")[0];
                    int p = t.length() > 0 ? Integer.valueOf(t).intValue() : -1;
                    if (p > 1) {
                        viewNotesURL = viewNotesURL.replace("listNotes_p_=" + p, "listNotes_p_=" + (p - 1));
                        //forwardPage(Page.setNewPage(viewNotesURL, "View Notes"));
                    	try {
							getServletContext().getRequestDispatcher(viewNotesURL).forward(request, response);
						} catch (ServletException e) {
							// TODO Auto-generated catch block
							e.printStackTrace();
						} catch (IOException e) {
							// TODO Auto-generated catch block
							e.printStackTrace();
						}
                    } else if (p <= 0) {
                        forwardPage(Page.VIEW_DISCREPANCY_NOTES_IN_STUDY);
                    }
                }
            }
*/
        logger.error(se.getMessage(), se);
    } finally {
        page1 = null;
        jspPage = null;
        temp = null;
    }
}

Example 3 with StudyInfoPanel

use of org.akaza.openclinica.view.StudyInfoPanel in project OpenClinica by OpenClinica.

the class ChangeCRFVersionController method resetPanel.

private void resetPanel(HttpServletRequest request) {
    StudyInfoPanel panel = new StudyInfoPanel();
    panel.reset();
    panel.setIconInfoShown(false);
    request.getSession().setAttribute("panel", panel);
}

Example 4 with StudyInfoPanel

use of org.akaza.openclinica.view.StudyInfoPanel in project OpenClinica by OpenClinica.

the class SDVController method viewAllSubjectHandler.

@RequestMapping("/viewAllSubjectSDVtmp")
public ModelMap viewAllSubjectHandler(HttpServletRequest request, @RequestParam("studyId") int studyId, HttpServletResponse response) {
    if (!mayProceed(request)) {
        try {
            response.sendRedirect(request.getContextPath() + "/MainMenu?message=authentication_failed");
        } catch (Exception e) {
            e.printStackTrace();
        }
        return null;
    }
    ResourceBundleProvider.updateLocale(LocaleResolver.getLocale(request));
    // Reseting the side info panel set by SecureControler Mantis Issue: 8680.
    // Todo need something to reset panel from all the Spring Controllers
    StudyInfoPanel panel = new StudyInfoPanel();
    panel.reset();
    HttpSession session = request.getSession();
    request.getSession().setAttribute("panel", panel);
    ModelMap gridMap = new ModelMap();
    // set up request attributes for sidebar
    // Not necessary when using old page design...
    // setUpSidebar(request);
    boolean showMoreLink = false;
    if (session.getAttribute("tableFacadeRestore") != null && session.getAttribute("tableFacadeRestore") == "false") {
        session.setAttribute("tableFacadeRestore", "true");
        session.setAttribute("sSdvRestore", "false");
        showMoreLink = true;
    } else if (request.getParameter("showMoreLink") != null) {
        showMoreLink = Boolean.parseBoolean(request.getParameter("showMoreLink").toString());
    } else if (session.getAttribute("sdv_showMoreLink") != null) {
        showMoreLink = Boolean.parseBoolean(session.getAttribute("sdv_showMoreLink") + "");
    } else {
        showMoreLink = true;
    }
    request.setAttribute("showMoreLink", showMoreLink + "");
    session.setAttribute("sdv_showMoreLink", showMoreLink + "");
    request.setAttribute("studyId", studyId);
    String restore = (String) request.getAttribute("sdv_restore");
    restore = restore != null && restore.length() > 0 ? restore : "false";
    request.setAttribute("sdv_restore", restore);
    // request.setAttribute("imagePathPrefix","../");
    // We need a study subject id for the first tab;
    Integer studySubjectId = (Integer) request.getAttribute("studySubjectId");
    studySubjectId = studySubjectId == null || studySubjectId == 0 ? 0 : studySubjectId;
    request.setAttribute("studySubjectId", studySubjectId);
    // set up the elements for the view's filter box
    // sdvUtil.prepareSDVSelectElements(request,studyBean);
    ArrayList<String> pageMessages = (ArrayList<String>) request.getAttribute("pageMessages");
    if (pageMessages == null) {
        pageMessages = new ArrayList<String>();
    }
    request.setAttribute("pageMessages", pageMessages);
    String sdvMatrix = sdvUtil.renderEventCRFTableWithLimit(request, studyId, "../");
    gridMap.addAttribute(SUBJECT_SDV_TABLE_ATTRIBUTE, sdvMatrix);
    return gridMap;
}

Example 5 with StudyInfoPanel

use of org.akaza.openclinica.view.StudyInfoPanel in project OpenClinica by OpenClinica.

the class StudyModuleController method handleMainPage.

@RequestMapping(method = RequestMethod.GET)
public ModelMap handleMainPage(HttpServletRequest request, HttpServletResponse response) {
    ModelMap map = new ModelMap();
    // Todo need something to reset panel from all the Spring Controllers
    StudyInfoPanel panel = new StudyInfoPanel();
    UserAccountBean userBean = (UserAccountBean) request.getSession().getAttribute("userBean");
    if (!mayProceed(request)) {
        try {
            response.sendRedirect(request.getContextPath() + "/MainMenu?message=authentication_failed");
        } catch (Exception e) {
            e.printStackTrace();
        }
        return null;
    }
    panel.reset();
    request.getSession().setAttribute("panel", panel);
    // setUpSidebar(request);
    ResourceBundleProvider.updateLocale(LocaleResolver.getLocale(request));
    StudyBean currentStudy = (StudyBean) request.getSession().getAttribute("study");
    eventDefinitionCRFDao = new EventDefinitionCRFDAO(dataSource);
    studyEventDefinitionDao = new StudyEventDefinitionDAO(dataSource);
    crfDao = new CRFDAO(dataSource);
    studyGroupClassDao = new StudyGroupClassDAO(dataSource);
    studyDao = new StudyDAO(dataSource);
    userDao = new UserAccountDAO(dataSource);
    ruleDao = new RuleDAO(dataSource);
    StudyModuleStatus sms = studyModuleStatusDao.findByStudyId(currentStudy.getId());
    if (sms == null) {
        sms = new StudyModuleStatus();
        sms.setStudyId(currentStudy.getId());
    }
    int crfCount = crfDao.findAllByStudy(currentStudy.getId()).size();
    int crfWithEventDefinition = crfDao.findAllActiveByDefinitions(currentStudy.getId()).size();
    int totalCrf = crfCount + crfWithEventDefinition;
    // int eventDefinitionCount = eventDefinitionCRFDao.findAllActiveByStudy(currentStudy).size();
    int eventDefinitionCount = studyEventDefinitionDao.findAllActiveByStudy(currentStudy).size();
    int subjectGroupCount = studyGroupClassDao.findAllActiveByStudy(currentStudy).size();
    // List<RuleSetBean> ruleSets = ruleSetService.getRuleSetsByStudy(currentStudy);
    // ruleSets = ruleSetService.filterByStatusEqualsAvailableOnlyRuleSetRules(ruleSets);
    int ruleCount = ruleSetService.getCountByStudy(currentStudy);
    int siteCount = studyDao.findOlnySiteIdsByStudy(currentStudy).size();
    int userCount = userDao.findAllUsersByStudy(currentStudy.getId()).size();
    Collection childStudies = studyDao.findAllByParent(currentStudy.getId());
    Map childStudyUserCount = new HashMap();
    for (Object sb : childStudies) {
        StudyBean childStudy = (StudyBean) sb;
        childStudyUserCount.put(childStudy.getName(), userDao.findAllUsersByStudy(childStudy.getId()).size());
    }
    if (sms.getCrf() == 0) {
        sms.setCrf(StudyModuleStatus.NOT_STARTED);
    }
    if (sms.getCrf() != 3 && totalCrf > 0) {
        sms.setCrf(StudyModuleStatus.IN_PROGRESS);
    }
    if (sms.getEventDefinition() == 0) {
        sms.setEventDefinition(StudyModuleStatus.NOT_STARTED);
    }
    if (sms.getEventDefinition() != 3 && eventDefinitionCount > 0) {
        sms.setEventDefinition(StudyModuleStatus.IN_PROGRESS);
    }
    if (sms.getSubjectGroup() == 0) {
        sms.setSubjectGroup(StudyModuleStatus.NOT_STARTED);
    }
    if (sms.getSubjectGroup() != 3 && subjectGroupCount > 0) {
        sms.setSubjectGroup(StudyModuleStatus.IN_PROGRESS);
    }
    if (sms.getRule() == 0) {
        sms.setRule(StudyModuleStatus.NOT_STARTED);
    }
    if (sms.getRule() != 3 && ruleCount > 0) {
        sms.setRule(StudyModuleStatus.IN_PROGRESS);
    }
    if (sms.getSite() == 0) {
        sms.setSite(StudyModuleStatus.NOT_STARTED);
    }
    if (sms.getSite() != 3 && siteCount > 0) {
        sms.setSite(StudyModuleStatus.IN_PROGRESS);
    }
    if (sms.getUsers() == 0) {
        sms.setUsers(StudyModuleStatus.NOT_STARTED);
    }
    if (sms.getUsers() != 3 && userCount > 0) {
        sms.setUsers(StudyModuleStatus.IN_PROGRESS);
    }
    map.addObject(sms);
    map.addAttribute("crfCount", totalCrf);
    map.addAttribute("eventDefinitionCount", eventDefinitionCount);
    map.addAttribute("subjectGroupCount", subjectGroupCount);
    map.addAttribute("ruleCount", ruleCount);
    map.addAttribute("siteCount", siteCount);
    map.addAttribute("userCount", userCount);
    map.addAttribute("childStudyUserCount", childStudyUserCount);
    map.addAttribute("studyId", currentStudy.getId());
    map.addAttribute("currentStudy", currentStudy);
    // Load Participate registration information
    String portalURL = CoreResources.getField("portalURL");
    map.addAttribute("portalURL", portalURL);
    if (portalURL != null && !portalURL.equals("")) {
        String participateOCStatus = currentStudy.getStudyParameterConfig().getParticipantPortal();
        ParticipantPortalRegistrar registrar = new ParticipantPortalRegistrar();
        Authorization pManageAuthorization = registrar.getAuthorization(currentStudy.getOid());
        String participateStatus = "";
        String url = "";
        try {
            URL pManageUrl = new URL(portalURL);
            if (pManageAuthorization != null && pManageAuthorization.getAuthorizationStatus() != null && pManageAuthorization.getAuthorizationStatus().getStatus() != null)
                participateStatus = pManageAuthorization.getAuthorizationStatus().getStatus();
            map.addAttribute("participateURL", pManageUrl);
            map.addAttribute("participateOCStatus", participateOCStatus);
            map.addAttribute("participateStatus", participateStatus);
            if (pManageAuthorization != null && pManageAuthorization.getStudy() != null && pManageAuthorization.getStudy().getHost() != null && !pManageAuthorization.getStudy().getHost().equals("")) {
                url = pManageUrl.getProtocol() + "://" + pManageAuthorization.getStudy().getHost() + "." + pManageUrl.getHost() + ((pManageUrl.getPort() > 0) ? ":" + String.valueOf(pManageUrl.getPort()) : "");
            }
        } catch (MalformedURLException e) {
            logger.error(e.getMessage());
            logger.error(ExceptionUtils.getStackTrace(e));
        }
        map.addAttribute("participateURLDisplay", url);
    }
    // Load Randomization  information
    String moduleManager = CoreResources.getField("moduleManager");
    map.addAttribute("moduleManager", moduleManager);
    if (moduleManager != null && !moduleManager.equals("")) {
        String randomizationOCStatus = currentStudy.getStudyParameterConfig().getRandomization();
        RandomizationRegistrar randomizationRegistrar = new RandomizationRegistrar();
        SeRandomizationDTO randomization = null;
        try {
            randomization = randomizationRegistrar.getCachedRandomizationDTOObject(currentStudy.getOid(), true);
        } catch (Exception e1) {
            // TODO Auto-generated catch block
            e1.printStackTrace();
        }
        String randomizationStatus = "";
        URL randomizeUrl = null;
        if (randomization != null && randomization.getStatus() != null) {
            randomizationStatus = randomization.getStatus();
            if (randomization.getUrl() != null) {
                try {
                    randomizeUrl = new URL(randomization.getUrl());
                } catch (MalformedURLException e) {
                    // TODO Auto-generated catch block
                    e.printStackTrace();
                }
            }
        }
        map.addAttribute("randomizeURL", randomizeUrl);
        map.addAttribute("randomizationOCStatus", randomizationOCStatus);
        map.addAttribute("randomizationStatus", randomizationStatus);
    }
    // @pgawade 13-April-2011- #8877: Added the rule designer URL
    if (null != coreResources) {
        map.addAttribute("ruleDesignerURL", coreResources.getField("designer.url"));
        map.addAttribute("contextPath", getContextPath(request));
        logMe("before checking getHostPath url = " + request.getRequestURL());
        // JN: for the eclinicalhosting the https is not showing up in the request path, going for a fix of taking
        // the hostpath from sysurl
        // map.addAttribute("hostPath", getHostPath(request));
        map.addAttribute("hostPath", getHostPathFromSysUrl(coreResources.getField("sysURL.base"), request.getContextPath()));
        map.addAttribute("path", "pages/studymodule");
    }
    // UserAccountBean userBean = (UserAccountBean) request.getSession().getAttribute("userBean");
    request.setAttribute("userBean", userBean);
    ArrayList statusMap = Status.toStudyUpdateMembersList();
    // statusMap.add(Status.PENDING);
    request.setAttribute("statusMap", statusMap);
    if (currentStudy.getParentStudyId() > 0) {
        StudyBean parentStudy = (StudyBean) studyDao.findByPK(currentStudy.getParentStudyId());
        request.setAttribute("parentStudy", parentStudy);
    }
    ArrayList pageMessages = new ArrayList();
    if (request.getSession().getAttribute("pageMessages") != null) {
        pageMessages.addAll((ArrayList) request.getSession().getAttribute("pageMessages"));
        request.setAttribute("pageMessages", pageMessages);
        request.getSession().removeAttribute("pageMessages");
    }
    ArrayList regMessages = new ArrayList();
    if (request.getSession().getAttribute(REG_MESSAGE) != null) {
        regMessages.addAll((ArrayList) request.getSession().getAttribute(REG_MESSAGE));
        request.setAttribute(REG_MESSAGE, regMessages);
        request.getSession().removeAttribute(REG_MESSAGE);
    }
    return map;
}