Examples with FileSKVWriter org.apache.accumulo.core.file.FileSKVWriter used on opensource projects

Example 1 with FileSKVWriter

use of org.apache.accumulo.core.file.FileSKVWriter in project Gaffer by gchq.

the class BloomFilter18IT method testFilter.

private void testFilter(final AccumuloElementConverter elementConverter, final RangeFactory rangeFactory) throws AccumuloElementConversionException, RangeFactoryException, IOException {
    // Create random data to insert, and sort it
    final Random random = new Random();
    final HashSet<Key> keysSet = new HashSet<>();
    final HashSet<Entity> dataSet = new HashSet<>();
    for (int i = 0; i < 100000; i++) {
        final Entity source = new Entity(TestGroups.ENTITY);
        source.setVertex("type" + random.nextInt(Integer.MAX_VALUE));
        final Entity destination = new Entity(TestGroups.ENTITY);
        destination.setVertex("type" + random.nextInt(Integer.MAX_VALUE));
        dataSet.add(source);
        dataSet.add(destination);
        final Entity sourceEntity = new Entity(source.getGroup());
        sourceEntity.setVertex(source.getVertex());
        final Entity destinationEntity = new Entity(destination.getGroup());
        destinationEntity.setVertex(destination.getVertex());
        final Edge edge = new Edge(TestGroups.EDGE, source.getVertex(), destination.getVertex(), true);
        keysSet.add(elementConverter.getKeyFromEntity(sourceEntity));
        keysSet.add(elementConverter.getKeyFromEntity(destinationEntity));
        final Pair<Key> edgeKeys = elementConverter.getKeysFromEdge(edge);
        keysSet.add(edgeKeys.getFirst());
        keysSet.add(edgeKeys.getSecond());
    }
    final ArrayList<Key> keys = new ArrayList<>(keysSet);
    Collections.sort(keys);
    final Properties property = new Properties();
    property.put(AccumuloPropertyNames.COUNT, 10);
    final Value value = elementConverter.getValueFromProperties(TestGroups.ENTITY, property);
    final Value value2 = elementConverter.getValueFromProperties(TestGroups.EDGE, property);
    // Create Accumulo configuration
    final ConfigurationCopy accumuloConf = new ConfigurationCopy(AccumuloConfiguration.getDefaultConfiguration());
    accumuloConf.set(Property.TABLE_BLOOM_ENABLED, "true");
    accumuloConf.set(Property.TABLE_BLOOM_KEY_FUNCTOR, CoreKeyBloomFunctor.class.getName());
    accumuloConf.set(Property.TABLE_FILE_TYPE, RFile.EXTENSION);
    accumuloConf.set(Property.TABLE_BLOOM_LOAD_THRESHOLD, "1");
    accumuloConf.set(Property.TSERV_BLOOM_LOAD_MAXCONCURRENT, "1");
    // Create Hadoop configuration
    final Configuration conf = CachedConfiguration.getInstance();
    final FileSystem fs = FileSystem.get(conf);
    // Open file
    final String suffix = FileOperations.getNewFileExtension(accumuloConf);
    final String filenameTemp = tempFolder.getRoot().getAbsolutePath();
    final String filename = filenameTemp + "." + suffix;
    final File file = new File(filename);
    if (file.exists()) {
        file.delete();
    }
    final FileSKVWriter writer = FileOperations.getInstance().newWriterBuilder().forFile(filename, fs, conf).withTableConfiguration(accumuloConf).build();
    try {
        // Write data to file
        writer.startDefaultLocalityGroup();
        for (final Key key : keys) {
            if (elementConverter.getElementFromKey(key).getGroup().equals(TestGroups.ENTITY)) {
                writer.append(key, value);
            } else {
                writer.append(key, value2);
            }
        }
    } finally {
        writer.close();
    }
    // Reader
    final FileSKVIterator reader = FileOperations.getInstance().newReaderBuilder().forFile(filename, fs, conf).withTableConfiguration(accumuloConf).seekToBeginning(false).build();
    try {
        // Calculate random look up rate - run it 3 times and take best
        final int numTrials = 5;
        double maxRandomRate = -1.0;
        for (int i = 0; i < numTrials; i++) {
            final double rate = calculateRandomLookUpRate(reader, dataSet, random, rangeFactory);
            if (rate > maxRandomRate) {
                maxRandomRate = rate;
            }
        }
        LOGGER.info("Max random rate = " + maxRandomRate);
        // Calculate look up rate for items that were inserted
        double maxCausalRate = -1.0;
        for (int i = 0; i < numTrials; i++) {
            double rate = calculateCausalLookUpRate(reader, dataSet, random, rangeFactory);
            if (rate > maxCausalRate) {
                maxCausalRate = rate;
            }
        }
        LOGGER.info("Max causal rate = " + maxCausalRate);
        // Random look up rate should be much faster
        assertTrue(maxRandomRate > maxCausalRate);
    } finally {
        // Close reader
        reader.close();
    }
}

Example 2 with FileSKVWriter

use of org.apache.accumulo.core.file.FileSKVWriter in project Gaffer by gchq.

the class BloomFilterIT method testFilter.

private void testFilter(final AccumuloElementConverter elementConverter, final RangeFactory rangeFactory) throws AccumuloElementConversionException, RangeFactoryException, IOException {
    // Create random data to insert, and sort it
    final Random random = new Random();
    final HashSet<Key> keysSet = new HashSet<>();
    final HashSet<Entity> dataSet = new HashSet<>();
    for (int i = 0; i < 100000; i++) {
        final Entity source = new Entity(TestGroups.ENTITY);
        source.setVertex("type" + random.nextInt(Integer.MAX_VALUE));
        final Entity destination = new Entity(TestGroups.ENTITY);
        destination.setVertex("type" + random.nextInt(Integer.MAX_VALUE));
        dataSet.add(source);
        dataSet.add(destination);
        final Entity sourceEntity = new Entity(source.getGroup());
        sourceEntity.setVertex(source.getVertex());
        final Entity destinationEntity = new Entity(destination.getGroup());
        destinationEntity.setVertex(destination.getVertex());
        final Edge edge = new Edge(TestGroups.EDGE, source.getVertex(), destination.getVertex(), true);
        keysSet.add(elementConverter.getKeyFromEntity(sourceEntity));
        keysSet.add(elementConverter.getKeyFromEntity(destinationEntity));
        final Pair<Key> edgeKeys = elementConverter.getKeysFromEdge(edge);
        keysSet.add(edgeKeys.getFirst());
        keysSet.add(edgeKeys.getSecond());
    }
    final ArrayList<Key> keys = new ArrayList<>(keysSet);
    Collections.sort(keys);
    final Properties property = new Properties();
    property.put(AccumuloPropertyNames.COUNT, 10);
    final Value value = elementConverter.getValueFromProperties(TestGroups.ENTITY, property);
    final Value value2 = elementConverter.getValueFromProperties(TestGroups.EDGE, property);
    // Create Accumulo configuration
    final ConfigurationCopy accumuloConf = new ConfigurationCopy(AccumuloConfiguration.getDefaultConfiguration());
    accumuloConf.set(Property.TABLE_BLOOM_ENABLED, "true");
    accumuloConf.set(Property.TABLE_BLOOM_KEY_FUNCTOR, CoreKeyBloomFunctor.class.getName());
    accumuloConf.set(Property.TABLE_FILE_TYPE, RFile.EXTENSION);
    accumuloConf.set(Property.TABLE_BLOOM_LOAD_THRESHOLD, "1");
    accumuloConf.set(Property.TSERV_BLOOM_LOAD_MAXCONCURRENT, "1");
    // Create Hadoop configuration
    final Configuration conf = CachedConfiguration.getInstance();
    final FileSystem fs = FileSystem.get(conf);
    // Open file
    final String suffix = FileOperations.getNewFileExtension(accumuloConf);
    final String filenameTemp = tempFolder.getRoot().getAbsolutePath();
    final String filename = filenameTemp + "." + suffix;
    final File file = new File(filename);
    if (file.exists()) {
        file.delete();
    }
    final FileSKVWriter writer = FileOperations.getInstance().openWriter(filename, fs, conf, accumuloConf);
    try {
        // Write data to file
        writer.startDefaultLocalityGroup();
        for (final Key key : keys) {
            if (elementConverter.getElementFromKey(key).getGroup().equals(TestGroups.ENTITY)) {
                writer.append(key, value);
            } else {
                writer.append(key, value2);
            }
        }
    } finally {
        writer.close();
    }
    // Reader
    final FileSKVIterator reader = FileOperations.getInstance().openReader(filename, false, fs, conf, accumuloConf);
    try {
        // Calculate random look up rate - run it 3 times and take best
        final int numTrials = 5;
        double maxRandomRate = -1.0;
        for (int i = 0; i < numTrials; i++) {
            final double rate = calculateRandomLookUpRate(reader, dataSet, random, rangeFactory);
            if (rate > maxRandomRate) {
                maxRandomRate = rate;
            }
        }
        LOGGER.info("Max random rate = " + maxRandomRate);
        // Calculate look up rate for items that were inserted
        double maxCausalRate = -1.0;
        for (int i = 0; i < numTrials; i++) {
            double rate = calculateCausalLookUpRate(reader, dataSet, random, rangeFactory);
            if (rate > maxCausalRate) {
                maxCausalRate = rate;
            }
        }
        LOGGER.info("Max causal rate = " + maxCausalRate);
        // Random look up rate should be much faster
        assertTrue(maxRandomRate > maxCausalRate);
    } finally {
        // Close reader
        reader.close();
    }
}