Examples with RegistryException org.apache.airavata.registry.cpi.RegistryException used on opensource projects

Example 71 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method addProcess.

public String addProcess(ProcessModel process, String expId) throws RegistryException {
    try {
        ProcessResource processResource = new ProcessResource();
        String processId = AiravataUtils.getId("PROCESS");
        process.setProcessId(processId);
        processResource.setProcessId(processId);
        processResource.setExperimentId(expId);
        processResource.setCreationTime(AiravataUtils.getTime(process.getCreationTime()));
        processResource.setLastUpdateTime(AiravataUtils.getTime(process.getLastUpdateTime()));
        processResource.setProcessDetail(process.getProcessDetail());
        processResource.setApplicationInterfaceId(process.getApplicationInterfaceId());
        processResource.setTaskDag(process.getTaskDag());
        processResource.setGatewayExecutionId(process.getGatewayExecutionId());
        processResource.setComputeResourceId(process.getComputeResourceId());
        processResource.setApplicationInterfaceId(process.getApplicationInterfaceId());
        processResource.setStorageResourceId(process.getStorageResourceId());
        processResource.setUserDn(process.getUserDn());
        processResource.setGenerateCert(process.isGenerateCert());
        processResource.setExperimentDataDir(process.getExperimentDataDir());
        processResource.setUserName(process.getUserName());
        processResource.setUseUserCRPref(process.isUseUserCRPref());
        if (process.isEnableEmailNotification()) {
            processResource.setEnableEmailNotification(true);
            if (process.getEmailAddresses() != null) {
                processResource.setEmailAddresses(StringUtils.join(process.getEmailAddresses(), ","));
            }
        } else {
            processResource.setEnableEmailNotification(false);
        }
        processResource.save();
        if (process.getProcessResourceSchedule() != null) {
            addProcessResourceSchedule(process.getProcessResourceSchedule(), process.getProcessId());
        }
        if (process.getProcessInputs() != null && process.getProcessInputs().size() > 0) {
            addProcessInputs(process.getProcessInputs(), process.getProcessId());
        }
        if (process.getProcessOutputs() != null && process.getProcessOutputs().size() > 0) {
            addProcessOutputs(process.getProcessOutputs(), process.getProcessId());
        }
        ProcessStatus processStatus = new ProcessStatus();
        processStatus.setState(ProcessState.CREATED);
        List<ProcessStatus> processStatuses = new ArrayList<>();
        processStatuses.add(processStatus);
        addProcessStatus(processStatuses.get(0), process.getProcessId());
        if (process.getProcessErrors() != null) {
            addProcessError(process.getProcessErrors().get(0), process.getProcessId());
        }
    } catch (Exception e) {
        logger.error(expId, "Error while adding process...", e);
        throw new RegistryException(e);
    }
    return process.getProcessId();
}

Example 72 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method addProcessResourceSchedule.

public String addProcessResourceSchedule(ComputationalResourceSchedulingModel resourceSchedule, String processID) throws RegistryException {
    try {
        ProcessResourceScheduleResource processResourceSchedule = new ProcessResourceScheduleResource();
        processResourceSchedule.setProcessId(processID);
        processResourceSchedule.setResourceHostId(resourceSchedule.getResourceHostId());
        processResourceSchedule.setTotalCpuCount(resourceSchedule.getTotalCPUCount());
        processResourceSchedule.setNodeCount(resourceSchedule.getNodeCount());
        processResourceSchedule.setNumberOfThreads(resourceSchedule.getNumberOfThreads());
        processResourceSchedule.setQueueName(resourceSchedule.getQueueName());
        processResourceSchedule.setWallTimeLimit(resourceSchedule.getWallTimeLimit());
        processResourceSchedule.setTotalPhysicalMemory(resourceSchedule.getTotalPhysicalMemory());
        processResourceSchedule.setOverrideAllocationProjectNumber(resourceSchedule.getOverrideAllocationProjectNumber());
        processResourceSchedule.setOverrideLoginUserName(resourceSchedule.getOverrideLoginUserName());
        processResourceSchedule.setOverrideScratchLocation(resourceSchedule.getOverrideScratchLocation());
        processResourceSchedule.setStaticWorkingDir(resourceSchedule.getStaticWorkingDir());
        processResourceSchedule.save();
    } catch (Exception e) {
        logger.error("Unable to save user config data", e);
        throw new RegistryException(e);
    }
    return processID;
}

Example 73 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method addProcessOutputs.

public String addProcessOutputs(List<OutputDataObjectType> processOutput, String processID) throws RegistryException {
    try {
        for (OutputDataObjectType output : processOutput) {
            ProcessOutputResource resource = new ProcessOutputResource();
            resource.setProcessId(processID);
            resource.setOutputName(output.getName());
            resource.setOutputValue(output.getValue());
            if (output.getType() != null) {
                resource.setDataType(output.getType().toString());
            }
            resource.setApplicationArgument(output.getApplicationArgument());
            resource.setIsRequired(output.isIsRequired());
            resource.setRequiredToAddedToCmd(output.isRequiredToAddedToCommandLine());
            resource.setDataMovement(output.isDataMovement());
            resource.setLocation(output.getLocation());
            resource.setSearchQuery(output.getSearchQuery());
            resource.setOutputStreaming(output.isOutputStreaming());
            resource.setStorageResourceId(output.getStorageResourceId());
            resource.save();
        }
        return processID;
    } catch (Exception e) {
        logger.error("Error while adding process outputs...", e);
        throw new RegistryException(e);
    }
}

Example 74 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method updateExpOutputs.

public void updateExpOutputs(List<OutputDataObjectType> exOutput, String expId) throws RegistryException {
    try {
        ExperimentResource experiment = gatewayResource.getExperiment(expId);
        List<ExperimentOutputResource> existingExpOutputs = experiment.getExperimentOutputs();
        for (OutputDataObjectType output : exOutput) {
            for (ExperimentOutputResource resource : existingExpOutputs) {
                if (resource.getOutputName().equals(output.getName())) {
                    resource.setExperimentId(expId);
                    resource.setOutputName(output.getName());
                    resource.setOutputValue(output.getValue());
                    if (output.getType() != null) {
                        resource.setDataType(output.getType().toString());
                    }
                    resource.setIsRequired(output.isIsRequired());
                    resource.setRequiredToAddedToCmd(output.isRequiredToAddedToCommandLine());
                    resource.setDataMovement(output.isDataMovement());
                    resource.setLocation(output.getLocation());
                    resource.setApplicationArgument(output.getApplicationArgument());
                    resource.setSearchQuery(output.getSearchQuery());
                    resource.setOutputStreaming(output.isOutputStreaming());
                    resource.setStorageResourceId(output.getStorageResourceId());
                    resource.save();
                }
            }
        }
    } catch (Exception e) {
        logger.error("Error while updating experiment outputs", e);
        throw new RegistryException(e);
    }
}

Example 75 with RegistryException

use of org.apache.airavata.registry.cpi.RegistryException in project airavata by apache.

the class ExperimentRegistry method removeProcess.

public void removeProcess(String processId) throws RegistryException {
    try {
        ExperimentResource experiment = new ExperimentResource();
        experiment.remove(ResourceType.PROCESS, processId);
    } catch (Exception e) {
        logger.error("Error while removing workflow node..", e);
        throw new RegistryException(e);
    }
}