Examples with LogOutputStream org.apache.commons.exec.LogOutputStream used on opensource projects

Example 1 with LogOutputStream

use of org.apache.commons.exec.LogOutputStream in project scala-maven-plugin by davidB.

the class JavaMainCallerByFork method run.

@Override
public boolean run(boolean displayCmd, boolean throwFailure) throws Exception {
    List<String> cmd = buildCommand();
    displayCmd(displayCmd, cmd);
    Executor exec = new DefaultExecutor();
    // err and out are redirected to out
    if (!_redirectToLog) {
        exec.setStreamHandler(new PumpStreamHandler(System.out, System.err, System.in));
    } else {
        exec.setStreamHandler(new PumpStreamHandler(new LogOutputStream() {

            private LevelState _previous = new LevelState();

            @Override
            protected void processLine(String line, int level) {
                try {
                    _previous = LogProcessorUtils.levelStateOf(line, _previous);
                    switch(_previous.level) {
                        case ERROR:
                            requester.getLog().error(line);
                            break;
                        case WARNING:
                            requester.getLog().warn(line);
                            break;
                        default:
                            requester.getLog().info(line);
                            break;
                    }
                } catch (Exception e) {
                    e.printStackTrace();
                }
            }
        }));
    }
    CommandLine cl = new CommandLine(cmd.get(0));
    for (int i = 1; i < cmd.size(); i++) {
        cl.addArgument(cmd.get(i), false);
    }
    try {
        int exitValue = exec.execute(cl);
        if (exitValue != 0) {
            if (throwFailure) {
                throw new MojoFailureException("command line returned non-zero value:" + exitValue);
            }
            return false;
        }
        if (!displayCmd)
            tryDeleteArgFile(cmd);
        return true;
    } catch (ExecuteException exc) {
        if (throwFailure) {
            throw exc;
        }
        return false;
    }
}

Example 2 with LogOutputStream

use of org.apache.commons.exec.LogOutputStream in project zeppelin by apache.

the class SubmarineJobTest method defaultExecutorTest.

@Test
public void defaultExecutorTest() throws IOException {
    DefaultExecutor executor = new DefaultExecutor();
    CommandLine cmdLine = CommandLine.parse(shell);
    URL urlTemplate = Resources.getResource(DEFAULT_EXECUTOR_TEST);
    cmdLine.addArgument(urlTemplate.getFile(), false);
    Map<String, String> env = new HashMap<>();
    env.put("CLASSPATH", "`$HADOOP_HDFS_HOME/bin/hadoop classpath --glob`");
    env.put("EVN", "test");
    AtomicBoolean cmdLineRunning = new AtomicBoolean(true);
    StringBuffer sbLogOutput = new StringBuffer();
    executor.setStreamHandler(new PumpStreamHandler(new LogOutputStream() {

        @Override
        protected void processLine(String line, int level) {
            // LOGGER.info(line);
            sbLogOutput.append(line + "\n");
        }
    }));
    executor.execute(cmdLine, env, new DefaultExecuteResultHandler() {

        @Override
        public void onProcessComplete(int exitValue) {
            cmdLineRunning.set(false);
        }

        @Override
        public void onProcessFailed(ExecuteException e) {
            cmdLineRunning.set(false);
            LOGGER.error(e.getMessage());
        }
    });
    int loopCount = 100;
    while ((loopCount-- > 0) && cmdLineRunning.get()) {
        try {
            Thread.sleep(1000);
        } catch (InterruptedException e) {
            e.printStackTrace();
        }
    }
    LOGGER.info(sbLogOutput.toString());
}

Example 3 with LogOutputStream

use of org.apache.commons.exec.LogOutputStream in project zeppelin by apache.

the class TensorboardRunThread method run.

public void run() {
    SubmarineUI submarineUI = submarineJob.getSubmarineUI();
    boolean tryLock = lockRunning.tryLock();
    try {
        Properties properties = submarineJob.getProperties();
        String tensorboardName = SubmarineUtils.getTensorboardName(submarineJob.getUserName());
        if (true == running.get()) {
            String message = String.format("tensorboard %s already running.", tensorboardName);
            submarineUI.outputLog("WARN", message);
            LOGGER.warn(message);
            return;
        }
        running.set(true);
        HashMap jinjaParams = SubmarineUtils.propertiesToJinjaParams(properties, submarineJob, false);
        // update jobName -> tensorboardName
        jinjaParams.put(SubmarineConstants.JOB_NAME, tensorboardName);
        URL urlTemplate = Resources.getResource(SubmarineJob.SUBMARINE_TENSORBOARD_JINJA);
        String template = Resources.toString(urlTemplate, Charsets.UTF_8);
        Jinjava jinjava = new Jinjava();
        String submarineCmd = jinjava.render(template, jinjaParams);
        // If the first line is a newline, delete the newline
        int firstLineIsNewline = submarineCmd.indexOf("\n");
        if (firstLineIsNewline == 0) {
            submarineCmd = submarineCmd.replaceFirst("\n", "");
        }
        StringBuffer sbLogs = new StringBuffer(submarineCmd);
        submarineUI.outputLog("Submarine submit command", sbLogs.toString());
        long timeout = Long.valueOf(properties.getProperty(SubmarineJob.TIMEOUT_PROPERTY, SubmarineJob.defaultTimeout));
        CommandLine cmdLine = CommandLine.parse(SubmarineJob.shell);
        cmdLine.addArgument(submarineCmd, false);
        DefaultExecutor executor = new DefaultExecutor();
        ExecuteWatchdog watchDog = new ExecuteWatchdog(timeout);
        executor.setWatchdog(watchDog);
        StringBuffer sbLogOutput = new StringBuffer();
        executor.setStreamHandler(new PumpStreamHandler(new LogOutputStream() {

            @Override
            protected void processLine(String line, int level) {
                line = line.trim();
                if (!StringUtils.isEmpty(line)) {
                    sbLogOutput.append(line + "\n");
                }
            }
        }));
        if (Boolean.valueOf(properties.getProperty(SubmarineJob.DIRECTORY_USER_HOME))) {
            executor.setWorkingDirectory(new File(System.getProperty("user.home")));
        }
        Map<String, String> env = new HashMap<>();
        String launchMode = (String) jinjaParams.get(SubmarineConstants.INTERPRETER_LAUNCH_MODE);
        if (StringUtils.equals(launchMode, "yarn")) {
            // Set environment variables in the container
            String javaHome, hadoopHome, hadoopConf;
            javaHome = (String) jinjaParams.get(SubmarineConstants.DOCKER_JAVA_HOME);
            hadoopHome = (String) jinjaParams.get(SubmarineConstants.DOCKER_HADOOP_HDFS_HOME);
            hadoopConf = (String) jinjaParams.get(SubmarineConstants.SUBMARINE_HADOOP_CONF_DIR);
            env.put("JAVA_HOME", javaHome);
            env.put("HADOOP_HOME", hadoopHome);
            env.put("HADOOP_HDFS_HOME", hadoopHome);
            env.put("HADOOP_CONF_DIR", hadoopConf);
            env.put("YARN_CONF_DIR", hadoopConf);
            env.put("CLASSPATH", "`$HADOOP_HDFS_HOME/bin/hadoop classpath --glob`");
        }
        LOGGER.info("Execute EVN: {}, Command: {} ", env.toString(), submarineCmd);
        AtomicBoolean cmdLineRunning = new AtomicBoolean(true);
        executor.execute(cmdLine, env, new DefaultExecuteResultHandler() {

            @Override
            public void onProcessComplete(int exitValue) {
                String message = String.format("jobName %s ProcessComplete exit value is : %d", tensorboardName, exitValue);
                LOGGER.info(message);
                submarineUI.outputLog("TENSORBOARD RUN COMPLETE", message);
                cmdLineRunning.set(false);
            }

            @Override
            public void onProcessFailed(ExecuteException e) {
                String message = String.format("jobName %s ProcessFailed exit value is : %d, exception is : %s", tensorboardName, e.getExitValue(), e.getMessage());
                LOGGER.error(message);
                submarineUI.outputLog("TENSORBOARD RUN FAILED", message);
                cmdLineRunning.set(false);
            }
        });
        int loopCount = 100;
        while ((loopCount-- > 0) && cmdLineRunning.get() && running.get()) {
            Thread.sleep(1000);
        }
        if (watchDog.isWatching()) {
            watchDog.destroyProcess();
            Thread.sleep(1000);
        }
        if (watchDog.isWatching()) {
            watchDog.killedProcess();
        }
        // Check if it has been submitted to YARN
        Map<String, Object> jobState = submarineJob.getJobStateByYarn(tensorboardName);
        loopCount = 50;
        while ((loopCount-- > 0) && !jobState.containsKey("state") && running.get()) {
            Thread.sleep(3000);
            jobState = submarineJob.getJobStateByYarn(tensorboardName);
        }
        if (!jobState.containsKey("state")) {
            String message = String.format("tensorboard %s was not submitted to YARN!", tensorboardName);
            LOGGER.error(message);
            submarineUI.outputLog("JOR RUN FAILED", message);
        }
    } catch (Exception e) {
        LOGGER.error(e.getMessage(), e);
        submarineUI.outputLog("Exception", e.getMessage());
    } finally {
        running.set(false);
        lockRunning.unlock();
    }
}

Example 4 with LogOutputStream

use of org.apache.commons.exec.LogOutputStream in project zeppelin by apache.

the class JobRunThread method run.

public void run() {
    boolean tryLock = lockRunning.tryLock();
    if (false == tryLock) {
        LOGGER.warn("Can not get JobRunThread lockRunning!");
        return;
    }
    SubmarineUI submarineUI = submarineJob.getSubmarineUI();
    try {
        InterpreterContext intpContext = submarineJob.getIntpContext();
        String noteId = intpContext.getNoteId();
        String userName = intpContext.getAuthenticationInfo().getUser();
        String jobName = SubmarineUtils.getJobName(userName, noteId);
        if (true == running.get()) {
            String message = String.format("Job %s already running.", jobName);
            submarineUI.outputLog("WARN", message);
            LOGGER.warn(message);
            return;
        }
        running.set(true);
        Properties properties = submarineJob.getProperties();
        HdfsClient hdfsClient = submarineJob.getHdfsClient();
        File pythonWorkDir = submarineJob.getPythonWorkDir();
        submarineJob.setCurrentJobState(EXECUTE_SUBMARINE);
        String algorithmPath = properties.getProperty(SubmarineConstants.SUBMARINE_ALGORITHM_HDFS_PATH, "");
        if (!algorithmPath.startsWith("hdfs://")) {
            String message = "Algorithm file upload HDFS path, " + "Must be `hdfs://` prefix. now setting " + algorithmPath;
            submarineUI.outputLog("Configuration error", message);
            return;
        }
        List<ParagraphInfo> paragraphInfos = intpContext.getIntpEventClient().getParagraphList(userName, noteId);
        String outputMsg = hdfsClient.saveParagraphToFiles(noteId, paragraphInfos, pythonWorkDir == null ? "" : pythonWorkDir.getAbsolutePath(), properties);
        if (!StringUtils.isEmpty(outputMsg)) {
            submarineUI.outputLog("Save algorithm file", outputMsg);
        }
        HashMap jinjaParams = SubmarineUtils.propertiesToJinjaParams(properties, submarineJob, true);
        URL urlTemplate = Resources.getResource(SubmarineJob.SUBMARINE_JOBRUN_TF_JINJA);
        String template = Resources.toString(urlTemplate, Charsets.UTF_8);
        Jinjava jinjava = new Jinjava();
        String submarineCmd = jinjava.render(template, jinjaParams);
        // If the first line is a newline, delete the newline
        int firstLineIsNewline = submarineCmd.indexOf("\n");
        if (firstLineIsNewline == 0) {
            submarineCmd = submarineCmd.replaceFirst("\n", "");
        }
        StringBuffer sbLogs = new StringBuffer(submarineCmd);
        submarineUI.outputLog("Submarine submit command", sbLogs.toString());
        long timeout = Long.valueOf(properties.getProperty(SubmarineJob.TIMEOUT_PROPERTY, SubmarineJob.defaultTimeout));
        CommandLine cmdLine = CommandLine.parse(SubmarineJob.shell);
        cmdLine.addArgument(submarineCmd, false);
        DefaultExecutor executor = new DefaultExecutor();
        ExecuteWatchdog watchDog = new ExecuteWatchdog(timeout);
        executor.setWatchdog(watchDog);
        StringBuffer sbLogOutput = new StringBuffer();
        executor.setStreamHandler(new PumpStreamHandler(new LogOutputStream() {

            @Override
            protected void processLine(String line, int level) {
                line = line.trim();
                if (!StringUtils.isEmpty(line)) {
                    sbLogOutput.append(line + "\n");
                }
            }
        }));
        if (Boolean.valueOf(properties.getProperty(SubmarineJob.DIRECTORY_USER_HOME))) {
            executor.setWorkingDirectory(new File(System.getProperty("user.home")));
        }
        Map<String, String> env = new HashMap<>();
        String launchMode = (String) jinjaParams.get(SubmarineConstants.INTERPRETER_LAUNCH_MODE);
        if (StringUtils.equals(launchMode, "yarn")) {
            // Set environment variables in the submarine interpreter container run on yarn
            String javaHome, hadoopHome, hadoopConf;
            javaHome = (String) jinjaParams.get(SubmarineConstants.DOCKER_JAVA_HOME);
            hadoopHome = (String) jinjaParams.get(SubmarineConstants.DOCKER_HADOOP_HDFS_HOME);
            hadoopConf = (String) jinjaParams.get(SubmarineConstants.SUBMARINE_HADOOP_CONF_DIR);
            env.put("JAVA_HOME", javaHome);
            env.put("HADOOP_HOME", hadoopHome);
            env.put("HADOOP_HDFS_HOME", hadoopHome);
            env.put("HADOOP_CONF_DIR", hadoopConf);
            env.put("YARN_CONF_DIR", hadoopConf);
            env.put("CLASSPATH", "`$HADOOP_HDFS_HOME/bin/hadoop classpath --glob`");
            env.put("ZEPPELIN_FORCE_STOP", "true");
        }
        LOGGER.info("Execute EVN: {}, Command: {} ", env.toString(), submarineCmd);
        AtomicBoolean cmdLineRunning = new AtomicBoolean(true);
        executor.execute(cmdLine, env, new DefaultExecuteResultHandler() {

            @Override
            public void onProcessComplete(int exitValue) {
                String message = String.format("jobName %s ProcessComplete exit value is : %d", jobName, exitValue);
                LOGGER.info(message);
                submarineUI.outputLog("JOR RUN COMPLETE", message);
                cmdLineRunning.set(false);
                submarineJob.setCurrentJobState(EXECUTE_SUBMARINE_FINISHED);
            }

            @Override
            public void onProcessFailed(ExecuteException e) {
                String message = String.format("jobName %s ProcessFailed exit value is : %d, exception is : %s", jobName, e.getExitValue(), e.getMessage());
                LOGGER.error(message);
                submarineUI.outputLog("JOR RUN FAILED", message);
                cmdLineRunning.set(false);
                submarineJob.setCurrentJobState(EXECUTE_SUBMARINE_ERROR);
            }
        });
        int loopCount = 100;
        while ((loopCount-- > 0) && cmdLineRunning.get() && running.get()) {
            Thread.sleep(1000);
        }
        if (watchDog.isWatching()) {
            watchDog.destroyProcess();
            Thread.sleep(1000);
        }
        if (watchDog.isWatching()) {
            watchDog.killedProcess();
        }
        // Check if it has been submitted to YARN
        Map<String, Object> jobState = submarineJob.getJobStateByYarn(jobName);
        loopCount = 50;
        while ((loopCount-- > 0) && !jobState.containsKey("state") && running.get()) {
            Thread.sleep(3000);
            jobState = submarineJob.getJobStateByYarn(jobName);
        }
        if (!jobState.containsKey("state")) {
            String message = String.format("JOB %s was not submitted to YARN!", jobName);
            LOGGER.error(message);
            submarineUI.outputLog("JOR RUN FAILED", message);
            submarineJob.setCurrentJobState(EXECUTE_SUBMARINE_ERROR);
        }
    } catch (Exception e) {
        LOGGER.error(e.getMessage(), e);
        submarineJob.setCurrentJobState(EXECUTE_SUBMARINE_ERROR);
        submarineUI.outputLog("Exception", e.getMessage());
    } finally {
        running.set(false);
        lockRunning.unlock();
    }
}