Examples with StringUtils.trim org.apache.commons.lang3.StringUtils.trim used on opensource projects

Example 1 with StringUtils.trim

use of org.apache.commons.lang3.StringUtils.trim in project gatk by broadinstitute.

the class PoNTestUtils method readTsvIntoMatrix.

/**
     * Reads a very basic tsv (numbers separated by tabs) into a RealMatrix.
     * <p>Very little error checking happens in this method</p>
     *
     * @param inputFile readable file.  Not {@code null}
     * @return never {@code null}
     */
public static RealMatrix readTsvIntoMatrix(final File inputFile) {
    IOUtils.canReadFile(inputFile);
    final List<double[]> allData = new ArrayList<>();
    int ctr = 0;
    try {
        final CSVReader reader = new CSVReader(new FileReader(inputFile), '\t', CSVWriter.NO_QUOTE_CHARACTER);
        String[] nextLine;
        while ((nextLine = reader.readNext()) != null) {
            ctr++;
            allData.add(Arrays.stream(nextLine).filter(s -> StringUtils.trim(s).length() > 0).map(s -> Double.parseDouble(StringUtils.trim(s))).mapToDouble(d -> d).toArray());
        }
    } catch (final IOException ioe) {
        Assert.fail("Could not open test file: " + inputFile, ioe);
    }
    final RealMatrix result = new Array2DRowRealMatrix(allData.size(), allData.get(0).length);
    for (int i = 0; i < result.getRowDimension(); i++) {
        result.setRow(i, allData.get(i));
    }
    return result;
}

Example 2 with StringUtils.trim

use of org.apache.commons.lang3.StringUtils.trim in project alf.io by alfio-event.

the class PaymentForm method validate.

public void validate(BindingResult bindingResult, TotalPrice reservationCost, Event event, List<TicketFieldConfiguration> fieldConf) {
    List<PaymentProxy> allowedPaymentMethods = event.getAllowedPaymentProxies();
    Optional<PaymentProxy> paymentProxyOptional = Optional.ofNullable(paymentMethod);
    PaymentProxy paymentProxy = paymentProxyOptional.filter(allowedPaymentMethods::contains).orElse(PaymentProxy.STRIPE);
    boolean priceGreaterThanZero = reservationCost.getPriceWithVAT() > 0;
    boolean multiplePaymentMethods = allowedPaymentMethods.size() > 1;
    if (multiplePaymentMethods && priceGreaterThanZero && !paymentProxyOptional.isPresent()) {
        bindingResult.reject(ErrorsCode.STEP_2_MISSING_PAYMENT_METHOD);
    } else if (priceGreaterThanZero && (paymentProxy == PaymentProxy.STRIPE && StringUtils.isBlank(stripeToken))) {
        bindingResult.reject(ErrorsCode.STEP_2_MISSING_STRIPE_TOKEN);
    }
    if (Objects.isNull(termAndConditionsAccepted) || !termAndConditionsAccepted) {
        bindingResult.reject(ErrorsCode.STEP_2_TERMS_NOT_ACCEPTED);
    }
    email = StringUtils.trim(email);
    fullName = StringUtils.trim(fullName);
    firstName = StringUtils.trim(firstName);
    lastName = StringUtils.trim(lastName);
    billingAddress = StringUtils.trim(billingAddress);
    ValidationUtils.rejectIfEmptyOrWhitespace(bindingResult, "email", ErrorsCode.STEP_2_EMPTY_EMAIL);
    rejectIfOverLength(bindingResult, "email", ErrorsCode.STEP_2_MAX_LENGTH_EMAIL, email, 255);
    if (event.mustUseFirstAndLastName()) {
        ValidationUtils.rejectIfEmptyOrWhitespace(bindingResult, "firstName", ErrorsCode.STEP_2_EMPTY_FIRSTNAME);
        rejectIfOverLength(bindingResult, "firstName", ErrorsCode.STEP_2_MAX_LENGTH_FIRSTNAME, fullName, 255);
        ValidationUtils.rejectIfEmptyOrWhitespace(bindingResult, "lastName", ErrorsCode.STEP_2_EMPTY_LASTNAME);
        rejectIfOverLength(bindingResult, "lastName", ErrorsCode.STEP_2_MAX_LENGTH_LASTNAME, fullName, 255);
    } else {
        ValidationUtils.rejectIfEmptyOrWhitespace(bindingResult, "fullName", ErrorsCode.STEP_2_EMPTY_FULLNAME);
        rejectIfOverLength(bindingResult, "fullName", ErrorsCode.STEP_2_MAX_LENGTH_FULLNAME, fullName, 255);
    }
    rejectIfOverLength(bindingResult, "billingAddress", ErrorsCode.STEP_2_MAX_LENGTH_BILLING_ADDRESS, billingAddress, 450);
    if (email != null && !email.contains("@") && !bindingResult.hasFieldErrors("email")) {
        bindingResult.rejectValue("email", ErrorsCode.STEP_2_INVALID_EMAIL);
    }
    if (hasPaypalTokens() && !PaypalManager.isValidHMAC(new CustomerName(fullName, firstName, lastName, event), email, billingAddress, hmac, event)) {
        bindingResult.reject(ErrorsCode.STEP_2_INVALID_HMAC);
    }
    if (!postponeAssignment) {
        boolean success = Optional.ofNullable(tickets).filter(m -> !m.isEmpty()).map(m -> m.entrySet().stream().map(e -> Validator.validateTicketAssignment(e.getValue(), fieldConf, Optional.empty(), event))).filter(s -> s.allMatch(ValidationResult::isSuccess)).isPresent();
        if (!success) {
            bindingResult.reject(ErrorsCode.STEP_2_MISSING_ATTENDEE_DATA);
        }
    }
}

Example 3 with StringUtils.trim

use of org.apache.commons.lang3.StringUtils.trim in project oap by oaplatform.

the class JavaCTemplate method addPathOr.

private void addPathOr(Class<T> clazz, String delimiter, StringBuilder c, AtomicInteger num, FieldStack fields, boolean last, AtomicInteger tab, String[] orPath, int orIndex, TLine line) throws NoSuchFieldException, NoSuchMethodException {
    val currentPath = orPath[orIndex].trim();
    val m = mapper.get(currentPath);
    if (m != null) {
        printDefaultValue(tab(c, tab), m.get(), line);
    } else {
        int sp = 0;
        StringBuilder newPath = new StringBuilder("s.");
        MutableObject<Type> lc = new MutableObject<>(clazz);
        AtomicInteger psp = new AtomicInteger(0);
        AtomicInteger opts = new AtomicInteger(0);
        while (sp >= 0) {
            sp = currentPath.indexOf('.', sp + 1);
            if (sp > 0) {
                Pair<Type, String> pnp = fields.computeIfAbsent(currentPath.substring(0, sp), Try.map((key) -> {
                    String prefix = StringUtils.trim(psp.get() > 1 ? key.substring(0, psp.get() - 1) : "");
                    String suffix = StringUtils.trim(key.substring(psp.get()));
                    boolean optional = isOptional(lc.getValue());
                    Type declaredFieldType = getDeclaredFieldOrFunctionType(optional ? getOptionalArgumentType(lc.getValue()) : lc.getValue(), suffix);
                    String classType = toJavaType(declaredFieldType);
                    String field = "field" + num.incrementAndGet();
                    Optional<Pair<Type, String>> rfP = Optional.ofNullable(fields.get(prefix));
                    String rf = rfP.map(p -> p._2 + (optional ? ".get()" : "") + "." + suffix).orElse("s." + key);
                    if (optional) {
                        tab(c, tab).append("if( ").append(rfP.map(p -> p._2).orElse("s")).append(".isPresent() ) {\n");
                        opts.incrementAndGet();
                        tabInc(tab);
                        fields.up();
                    }
                    tab(c, tab).append(" ").append(classType).append(" ").append(field).append(" = ").append(rf).append(";\n");
                    lc.setValue(declaredFieldType);
                    return __(lc.getValue(), field);
                }));
                newPath = new StringBuilder(pnp._2 + ".");
                lc.setValue(pnp._1);
                psp.set(sp + 1);
            } else {
                newPath.append(currentPath.substring(psp.get()));
            }
        }
        int in = newPath.toString().lastIndexOf('.');
        String pField = in > 0 ? newPath.substring(0, in) : newPath.toString();
        String cField = newPath.substring(in + 1);
        boolean isJoin = cField.startsWith("{");
        String[] cFields = isJoin ? StringUtils.split(cField.substring(1, cField.length() - 1), ',') : new String[] { cField };
        Type parentClass = lc.getValue();
        boolean isOptionalParent = isOptional(parentClass) && !cField.startsWith("isPresent");
        String optField = null;
        if (isOptionalParent) {
            opts.incrementAndGet();
            tab(c, tab).append("if( ").append(pField).append(".isPresent() ) {\n");
            fields.up();
            tabInc(tab);
            parentClass = getOptionalArgumentType(parentClass);
            optField = "opt" + num.incrementAndGet();
            tab(c, tab).append(" ").append(toJavaType(parentClass)).append(" ").append(optField).append(" = ").append(pField).append(".get();\n");
        }
        for (int i = 0; i < cFields.length; i++) {
            cField = StringUtils.trim(cFields[i]);
            Optional<Join> join = isJoin ? Optional.of(new Join(i, cFields.length)) : Optional.empty();
            if (cField.startsWith("\"")) {
                tab(c.append("\n"), tab);
                map.map(c, String.class, line, cField, delimiter, join);
            } else {
                if (isOptionalParent) {
                    newPath = new StringBuilder(in > 0 ? optField + "." + cField : cField);
                } else {
                    newPath = new StringBuilder(in > 0 ? pField + "." + cField : "s." + cField);
                }
                Type cc = in > 0 ? getDeclaredFieldOrFunctionType(parentClass, cField) : parentClass;
                add(c, num, newPath.toString(), cc, parentClass, true, tab, orPath, orIndex, clazz, delimiter, fields, last || (i < cFields.length - 1), line, join);
            }
        }
        c.append("\n");
        for (int i = 0; i < opts.get(); i++) {
            fields.down();
            tabDec(tab);
            tab(c, tab).append("} else {\n");
            fields.up();
            tabInc(tab);
            if (orIndex + 1 < orPath.length) {
                addPathOr(clazz, delimiter, c, num, fields, last, new AtomicInteger(tab.get() + 2), orPath, orIndex + 1, line);
            } else {
                printDefaultValue(c, line.defaultValue, line);
                if (!map.ignoreDefaultValue())
                    printDelimiter(delimiter, c, last, tab);
            }
            tabDec(tab);
            fields.down();
            tab(c, tab).append("}\n");
        }
    }
}

Example 4 with StringUtils.trim

use of org.apache.commons.lang3.StringUtils.trim in project kylo by Teradata.

the class DefaultServiceLevelAgreementService method saveAndScheduleSla.

/**
 * In order to Save an SLA if it is related to a Feed(s) the user needs to have EDIT_DETAILS permission on the Feed(s)
 *
 * @param serviceLevelAgreement the sla to save
 * @param feed                  an option Feed to relate to this SLA.  If this is not present the related feeds are also embedded in the SLA policies.  The Feed is a pointer access to the current
 *                              feed the user is editing if they are creating an SLA from the Feed Details page. If creating an SLA from the main SLA page the feed property will not be populated.
 */
private ServiceLevelAgreement saveAndScheduleSla(ServiceLevelAgreementGroup serviceLevelAgreement, FeedMetadata feed) {
    // ensure user has permissions to edit the SLA
    if (serviceLevelAgreement != null) {
        ServiceLevelAgreementMetricTransformerHelper transformer = new ServiceLevelAgreementMetricTransformerHelper();
        // Read the feeds on the SLA as a Service. Then verify the current user has access to edit these feeds
        List<String> feedsOnSla = metadataAccess.read(() -> {
            List<String> feedIds = new ArrayList<>();
            // all referencing Feeds
            List<String> systemCategoryAndFeedNames = transformer.getCategoryFeedNames(serviceLevelAgreement);
            for (String categoryAndFeed : systemCategoryAndFeedNames) {
                // fetch and update the reference to the sla
                String categoryName = StringUtils.trim(StringUtils.substringBefore(categoryAndFeed, "."));
                String feedName = StringUtils.trim(StringUtils.substringAfterLast(categoryAndFeed, "."));
                Feed feedEntity = feedProvider.findBySystemName(categoryName, feedName);
                if (feedEntity != null) {
                    feedIds.add(feedEntity.getId().toString());
                }
            }
            return feedIds;
        }, MetadataAccess.SERVICE);
        boolean allowedToEdit = feedsOnSla.isEmpty() ? true : feedsOnSla.stream().allMatch(feedId -> feedManagerFeedService.checkFeedPermission(feedId, FeedAccessControl.EDIT_DETAILS));
        if (allowedToEdit) {
            return metadataAccess.commit(() -> {
                // Re read back in the Feeds for this session
                Set<Feed> slaFeeds = new HashSet<Feed>();
                Set<Feed.ID> slaFeedIds = new HashSet<Feed.ID>();
                feedsOnSla.stream().forEach(feedId -> {
                    Feed feedEntity = feedProvider.findById(feedProvider.resolveId(feedId));
                    if (feedEntity != null) {
                        slaFeeds.add(feedEntity);
                        slaFeedIds.add(feedEntity.getId());
                    }
                });
                if (feed != null) {
                    feedManagerFeedService.checkFeedPermission(feed.getId(), FeedAccessControl.EDIT_DETAILS);
                }
                if (feed != null) {
                    transformer.applyFeedNameToCurrentFeedProperties(serviceLevelAgreement, feed.getCategory().getSystemName(), feed.getSystemFeedName());
                }
                ServiceLevelAgreement sla = transformer.getServiceLevelAgreement(serviceLevelAgreement);
                ServiceLevelAgreementBuilder slaBuilder = null;
                com.thinkbiganalytics.metadata.sla.api.ServiceLevelAgreement.ID existingId = null;
                if (StringUtils.isNotBlank(sla.getId())) {
                    existingId = slaProvider.resolve(sla.getId());
                }
                if (existingId != null) {
                    slaBuilder = slaProvider.builder(existingId);
                } else {
                    slaBuilder = slaProvider.builder();
                }
                slaBuilder.name(sla.getName()).description(sla.getDescription());
                for (com.thinkbiganalytics.metadata.rest.model.sla.ObligationGroup group : sla.getGroups()) {
                    ObligationGroupBuilder groupBuilder = slaBuilder.obligationGroupBuilder(ObligationGroup.Condition.valueOf(group.getCondition()));
                    for (Obligation o : group.getObligations()) {
                        groupBuilder.obligationBuilder().metric(o.getMetrics()).description(o.getDescription()).build();
                    }
                    groupBuilder.build();
                }
                com.thinkbiganalytics.metadata.sla.api.ServiceLevelAgreement savedSla = slaBuilder.build();
                List<ServiceLevelAgreementActionConfiguration> actions = transformer.getActionConfigurations(serviceLevelAgreement);
                // now assign the sla checks
                slaProvider.slaCheckBuilder(savedSla.getId()).removeSlaChecks().actionConfigurations(actions).build();
                // relate them
                Set<Feed.ID> feedIds = new HashSet<>();
                FeedServiceLevelAgreementRelationship feedServiceLevelAgreementRelationship = feedSlaProvider.relateFeeds(savedSla, slaFeeds);
                if (feedServiceLevelAgreementRelationship != null && feedServiceLevelAgreementRelationship.getFeeds() != null) {
                    feedIds = feedServiceLevelAgreementRelationship.getFeeds().stream().map(f -> f.getId()).collect(Collectors.toSet());
                }
                Set<VelocityTemplate.ID> velocityTemplates = findVelocityTemplates(serviceLevelAgreement);
                // Update the JPA mapping in Ops Manager for this SLA and its related Feeds
                serviceLevelAgreementDescriptionProvider.updateServiceLevelAgreement(savedSla.getId(), savedSla.getName(), savedSla.getDescription(), feedIds, velocityTemplates);
                com.thinkbiganalytics.metadata.rest.model.sla.FeedServiceLevelAgreement restModel = serviceLevelAgreementTransform.toModel(savedSla, slaFeeds, true);
                // schedule it
                serviceLevelAgreementScheduler.scheduleServiceLevelAgreement(savedSla);
                return restModel;
            });
        }
    }
    return null;
}

Example 5 with StringUtils.trim

use of org.apache.commons.lang3.StringUtils.trim in project eol-globi-data by jhpoelen.

the class CitationUtil method citationFor.

public static String citationFor(Dataset dataset) {
    String defaultCitation = "<" + dataset.getArchiveURI().toString() + ">";
    String citation = citationOrDefaultFor(dataset, defaultCitation);
    if (!StringUtils.contains(citation, "doi.org") && !StringUtils.contains(citation, "doi:")) {
        String citationTrimmed = StringUtils.trim(defaultString(citation));
        String doiTrimmed = defaultString(dataset.getDOI());
        if (StringUtils.isBlank(doiTrimmed)) {
            citation = citationTrimmed;
        } else {
            citation = citationTrimmed + separatorFor(citationTrimmed) + doiTrimmed;
        }
    }
    return StringUtils.trim(citation);
}