use of org.apache.drill.exec.store.parquet.ParquetDirectByteBufferAllocator in project drill by apache.
the class HiveDrillNativeScanBatchCreator method getBatch.
@Override
public ScanBatch getBatch(FragmentContext context, HiveDrillNativeParquetSubScan config, List<RecordBatch> children) throws ExecutionSetupException {
final HiveTableWithColumnCache table = config.getTable();
final List<InputSplit> splits = config.getInputSplits();
final List<HivePartition> partitions = config.getPartitions();
final List<SchemaPath> columns = config.getColumns();
final String partitionDesignator = context.getOptions().getOption(ExecConstants.FILESYSTEM_PARTITION_COLUMN_LABEL).string_val;
List<Map<String, String>> implicitColumns = Lists.newLinkedList();
boolean selectAllQuery = AbstractRecordReader.isStarQuery(columns);
final boolean hasPartitions = (partitions != null && partitions.size() > 0);
final List<String[]> partitionColumns = Lists.newArrayList();
final List<Integer> selectedPartitionColumns = Lists.newArrayList();
List<SchemaPath> newColumns = columns;
if (!selectAllQuery) {
// Separate out the partition and non-partition columns. Non-partition columns are passed directly to the
// ParquetRecordReader. Partition columns are passed to ScanBatch.
newColumns = Lists.newArrayList();
Pattern pattern = Pattern.compile(String.format("%s[0-9]+", partitionDesignator));
for (SchemaPath column : columns) {
Matcher m = pattern.matcher(column.getAsUnescapedPath());
if (m.matches()) {
selectedPartitionColumns.add(Integer.parseInt(column.getAsUnescapedPath().substring(partitionDesignator.length())));
} else {
newColumns.add(column);
}
}
}
final OperatorContext oContext = context.newOperatorContext(config);
int currentPartitionIndex = 0;
final List<RecordReader> readers = Lists.newArrayList();
final HiveConf conf = config.getHiveConf();
// TODO: In future we can get this cache from Metadata cached on filesystem.
final Map<String, ParquetMetadata> footerCache = Maps.newHashMap();
Map<String, String> mapWithMaxColumns = Maps.newLinkedHashMap();
try {
for (InputSplit split : splits) {
final FileSplit fileSplit = (FileSplit) split;
final Path finalPath = fileSplit.getPath();
final JobConf cloneJob = new ProjectionPusher().pushProjectionsAndFilters(new JobConf(conf), finalPath.getParent());
final FileSystem fs = finalPath.getFileSystem(cloneJob);
ParquetMetadata parquetMetadata = footerCache.get(finalPath.toString());
if (parquetMetadata == null) {
parquetMetadata = ParquetFileReader.readFooter(cloneJob, finalPath);
footerCache.put(finalPath.toString(), parquetMetadata);
}
final List<Integer> rowGroupNums = getRowGroupNumbersFromFileSplit(fileSplit, parquetMetadata);
for (int rowGroupNum : rowGroupNums) {
//DRILL-5009 : Skip the row group if the row count is zero
if (parquetMetadata.getBlocks().get(rowGroupNum).getRowCount() == 0) {
continue;
}
// Drill has only ever written a single row group per file, only detect corruption
// in the first row group
ParquetReaderUtility.DateCorruptionStatus containsCorruptDates = ParquetReaderUtility.detectCorruptDates(parquetMetadata, config.getColumns(), true);
if (logger.isDebugEnabled()) {
logger.debug(containsCorruptDates.toString());
}
readers.add(new ParquetRecordReader(context, Path.getPathWithoutSchemeAndAuthority(finalPath).toString(), rowGroupNum, fs, CodecFactory.createDirectCodecFactory(fs.getConf(), new ParquetDirectByteBufferAllocator(oContext.getAllocator()), 0), parquetMetadata, newColumns, containsCorruptDates));
Map<String, String> implicitValues = Maps.newLinkedHashMap();
if (hasPartitions) {
List<String> values = partitions.get(currentPartitionIndex).getValues();
for (int i = 0; i < values.size(); i++) {
if (selectAllQuery || selectedPartitionColumns.contains(i)) {
implicitValues.put(partitionDesignator + i, values.get(i));
}
}
}
implicitColumns.add(implicitValues);
if (implicitValues.size() > mapWithMaxColumns.size()) {
mapWithMaxColumns = implicitValues;
}
}
currentPartitionIndex++;
}
} catch (final IOException | RuntimeException e) {
AutoCloseables.close(e, readers);
throw new ExecutionSetupException("Failed to create RecordReaders. " + e.getMessage(), e);
}
// all readers should have the same number of implicit columns, add missing ones with value null
mapWithMaxColumns = Maps.transformValues(mapWithMaxColumns, Functions.constant((String) null));
for (Map<String, String> map : implicitColumns) {
map.putAll(Maps.difference(map, mapWithMaxColumns).entriesOnlyOnRight());
}
// create an empty RecordReader to output the schema
if (readers.size() == 0) {
readers.add(new HiveDefaultReader(table, null, null, columns, context, conf, ImpersonationUtil.createProxyUgi(config.getUserName(), context.getQueryUserName())));
}
return new ScanBatch(config, context, oContext, readers.iterator(), implicitColumns);
}
use of org.apache.drill.exec.store.parquet.ParquetDirectByteBufferAllocator in project drill by apache.
the class DrillParquetReader method setup.
@Override
public void setup(OperatorContext context, OutputMutator output) throws ExecutionSetupException {
try {
this.operatorContext = context;
schema = footer.getFileMetaData().getSchema();
MessageType projection = null;
if (isStarQuery()) {
projection = schema;
} else {
columnsNotFound = new ArrayList<SchemaPath>();
projection = getProjection(schema, getColumns(), columnsNotFound);
if (projection == null) {
projection = schema;
}
if (columnsNotFound != null && columnsNotFound.size() > 0) {
nullFilledVectors = new ArrayList<>();
for (SchemaPath col : columnsNotFound) {
nullFilledVectors.add((NullableIntVector) output.addField(MaterializedField.create(col.getAsUnescapedPath(), org.apache.drill.common.types.Types.optional(TypeProtos.MinorType.INT)), (Class<? extends ValueVector>) TypeHelper.getValueVectorClass(TypeProtos.MinorType.INT, TypeProtos.DataMode.OPTIONAL)));
}
if (columnsNotFound.size() == getColumns().size()) {
noColumnsFound = true;
}
}
}
logger.debug("Requesting schema {}", projection);
ColumnIOFactory factory = new ColumnIOFactory(false);
MessageColumnIO columnIO = factory.getColumnIO(projection, schema);
Map<ColumnPath, ColumnChunkMetaData> paths = new HashMap<>();
for (ColumnChunkMetaData md : footer.getBlocks().get(entry.getRowGroupIndex()).getColumns()) {
paths.put(md.getPath(), md);
}
Path filePath = new Path(entry.getPath());
BlockMetaData blockMetaData = footer.getBlocks().get(entry.getRowGroupIndex());
recordCount = (int) blockMetaData.getRowCount();
pageReadStore = new ColumnChunkIncReadStore(recordCount, CodecFactory.createDirectCodecFactory(fileSystem.getConf(), new ParquetDirectByteBufferAllocator(operatorContext.getAllocator()), 0), operatorContext.getAllocator(), fileSystem, filePath);
for (String[] path : schema.getPaths()) {
Type type = schema.getType(path);
if (type.isPrimitive()) {
ColumnChunkMetaData md = paths.get(ColumnPath.get(path));
pageReadStore.addColumn(schema.getColumnDescription(path), md);
}
}
if (!noColumnsFound) {
writer = new VectorContainerWriter(output);
// Discard the columns not found in the schema when create DrillParquetRecordMaterializer, since they have been added to output already.
final Collection<SchemaPath> columns = columnsNotFound == null || columnsNotFound.size() == 0 ? getColumns() : CollectionUtils.subtract(getColumns(), columnsNotFound);
recordMaterializer = new DrillParquetRecordMaterializer(output, writer, projection, columns, fragmentContext.getOptions(), containsCorruptedDates);
primitiveVectors = writer.getMapVector().getPrimitiveVectors();
recordReader = columnIO.getRecordReader(pageReadStore, recordMaterializer);
}
} catch (Exception e) {
handleAndRaise("Failure in setting up reader", e);
}
}
Aggregations