use of org.apache.ignite.ml.math.distances.ManhattanDistance in project ignite by apache.
the class KNNRegressionExample method main.
/**
* Executes example.
*
* @param args Command line arguments, none required.
*/
public static void main(String[] args) throws InterruptedException {
System.out.println(">>> kNN regression example started.");
// Start ignite grid.
try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
System.out.println(">>> Ignite grid started.");
IgniteThread igniteThread = new IgniteThread(ignite.configuration().getIgniteInstanceName(), KNNRegressionExample.class.getSimpleName(), () -> {
try {
// Prepare path to read
File file = IgniteUtils.resolveIgnitePath(KNN_CLEARED_MACHINES_TXT);
if (file == null)
throw new RuntimeException("Can't find file: " + KNN_CLEARED_MACHINES_TXT);
Path path = file.toPath();
// Read dataset from file
LabeledDataset dataset = LabeledDatasetLoader.loadFromTxtFile(path, SEPARATOR, false, false);
// Normalize dataset
Normalizer.normalizeWithMiniMax(dataset);
// Random splitting of iris data as 80% train and 20% test datasets
LabeledDatasetTestTrainPair split = new LabeledDatasetTestTrainPair(dataset, 0.2);
System.out.println("\n>>> Amount of observations in train dataset: " + split.train().rowSize());
System.out.println("\n>>> Amount of observations in test dataset: " + split.test().rowSize());
LabeledDataset test = split.test();
LabeledDataset train = split.train();
// Builds weighted kNN-regression with Manhattan Distance
KNNMultipleLinearRegression knnMdl = new KNNMultipleLinearRegression(7, new ManhattanDistance(), KNNStrategy.WEIGHTED, train);
// Clone labels
final double[] labels = test.labels();
// Save predicted classes to test dataset
LabellingMachine.assignLabels(test, knnMdl);
// Calculate mean squared error (MSE)
double mse = 0.0;
for (int i = 0; i < test.rowSize(); i++) mse += Math.pow(test.label(i) - labels[i], 2.0);
mse = mse / test.rowSize();
System.out.println("\n>>> Mean squared error (MSE) " + mse);
// Calculate mean absolute error (MAE)
double mae = 0.0;
for (int i = 0; i < test.rowSize(); i++) mae += Math.abs(test.label(i) - labels[i]);
mae = mae / test.rowSize();
System.out.println("\n>>> Mean absolute error (MAE) " + mae);
// Calculate R^2 as 1 - RSS/TSS
double avg = 0.0;
for (int i = 0; i < test.rowSize(); i++) avg += test.label(i);
avg = avg / test.rowSize();
double detCf = 0.0;
double tss = 0.0;
for (int i = 0; i < test.rowSize(); i++) {
detCf += Math.pow(test.label(i) - labels[i], 2.0);
tss += Math.pow(test.label(i) - avg, 2.0);
}
detCf = 1 - detCf / tss;
System.out.println("\n>>> R^2 " + detCf);
} catch (IOException e) {
e.printStackTrace();
System.out.println("\n>>> Unexpected exception, check resources: " + e);
} finally {
System.out.println("\n>>> kNN regression example completed.");
}
});
igniteThread.start();
igniteThread.join();
}
}
use of org.apache.ignite.ml.math.distances.ManhattanDistance in project ignite by apache.
the class IgniteKNNRegressionBenchmark method test.
/**
* {@inheritDoc}
*/
@Override
public boolean test(Map<Object, Object> ctx) throws Exception {
// Create IgniteThread, we must work with SparseDistributedMatrix inside IgniteThread
// because we create ignite cache internally.
IgniteThread igniteThread = new IgniteThread(ignite.configuration().getIgniteInstanceName(), this.getClass().getSimpleName(), new Runnable() {
/**
* {@inheritDoc}
*/
@Override
public void run() {
// IMPL NOTE originally taken from KNNRegressionExample.
// Obtain shuffled dataset.
LabeledDataset dataset = new Datasets().shuffleClearedMachines((int) (DataChanger.next()));
// Normalize dataset
Normalizer.normalizeWithMiniMax(dataset);
// Random splitting of iris data as 80% train and 20% test datasets.
LabeledDatasetTestTrainPair split = new LabeledDatasetTestTrainPair(dataset, 0.2);
LabeledDataset test = split.test();
LabeledDataset train = split.train();
// Builds weighted kNN-regression with Manhattan Distance.
KNNModel knnMdl = new KNNMultipleLinearRegression(7, new ManhattanDistance(), KNNStrategy.WEIGHTED, train);
// Clone labels
final double[] labels = test.labels();
// Calculate predicted classes.
for (int i = 0; i < test.rowSize() - 1; i++) knnMdl.apply(test.getRow(i).features());
}
});
igniteThread.start();
igniteThread.join();
return true;
}
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