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Example 6 with EncoderTrainer

use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project ignite by apache.

the class Step_16_Genetic_Programming_Search method main.

/**
 * Run example.
 */
public static void main(String[] args) {
    System.out.println();
    System.out.println(">>> Tutorial step 16 (Genetic Programming) example started.");
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        try {
            IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
            // Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
            final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
            TrainTestSplit<Integer, Vector> split = new TrainTestDatasetSplitter<Integer, Vector>().split(0.75);
            Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(6).fit(ignite, dataCache, vectorizer);
            Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
            Preprocessor<Integer, Vector> minMaxScalerPreprocessor = new MinMaxScalerTrainer<Integer, Vector>().fit(ignite, dataCache, imputingPreprocessor);
            NormalizationTrainer<Integer, Vector> normalizationTrainer = new NormalizationTrainer<Integer, Vector>().withP(1);
            Preprocessor<Integer, Vector> normalizationPreprocessor = normalizationTrainer.fit(ignite, dataCache, minMaxScalerPreprocessor);
            // Tune hyper-parameters with K-fold Cross-Validation on the split training set.
            DecisionTreeClassificationTrainer trainerCV = new DecisionTreeClassificationTrainer();
            CrossValidation<DecisionTreeModel, Integer, Vector> scoreCalculator = new CrossValidation<>();
            ParamGrid paramGrid = new ParamGrid().withParameterSearchStrategy(new EvolutionOptimizationStrategy()).addHyperParam("p", normalizationTrainer::withP, new Double[] { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 }).addHyperParam("maxDeep", trainerCV::withMaxDeep, new Double[] { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 }).addHyperParam("minImpurityDecrease", trainerCV::withMinImpurityDecrease, new Double[] { 0.0, 0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0 });
            scoreCalculator.withIgnite(ignite).withUpstreamCache(dataCache).withTrainer(trainerCV).withMetric(MetricName.ACCURACY).withFilter(split.getTrainFilter()).isRunningOnPipeline(false).withPreprocessor(normalizationPreprocessor).withAmountOfFolds(3).withParamGrid(paramGrid);
            CrossValidationResult crossValidationRes = scoreCalculator.tuneHyperParameters();
            System.out.println("Train with maxDeep: " + crossValidationRes.getBest("maxDeep") + " and minImpurityDecrease: " + crossValidationRes.getBest("minImpurityDecrease"));
            DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer().withMaxDeep(crossValidationRes.getBest("maxDeep")).withMinImpurityDecrease(crossValidationRes.getBest("minImpurityDecrease"));
            System.out.println(crossValidationRes);
            System.out.println("Best score: " + Arrays.toString(crossValidationRes.getBestScore()));
            System.out.println("Best hyper params: " + crossValidationRes.getBestHyperParams());
            System.out.println("Best average score: " + crossValidationRes.getBestAvgScore());
            crossValidationRes.getScoringBoard().forEach((hyperParams, score) -> System.out.println("Score " + Arrays.toString(score) + " for hyper params " + hyperParams));
            // Train decision tree model.
            DecisionTreeModel bestMdl = trainer.fit(ignite, dataCache, split.getTrainFilter(), normalizationPreprocessor);
            System.out.println("\n>>> Trained model: " + bestMdl);
            double accuracy = Evaluator.evaluate(dataCache, split.getTestFilter(), bestMdl, normalizationPreprocessor, new Accuracy<>());
            System.out.println("\n>>> Accuracy " + accuracy);
            System.out.println("\n>>> Test Error " + (1 - accuracy));
            System.out.println(">>> Tutorial step 16 (Genetic Programming) example completed.");
        } catch (FileNotFoundException e) {
            e.printStackTrace();
        }
    } finally {
        System.out.flush();
    }
}
Also used : DecisionTreeModel(org.apache.ignite.ml.tree.DecisionTreeModel) FileNotFoundException(java.io.FileNotFoundException) EvolutionOptimizationStrategy(org.apache.ignite.ml.selection.paramgrid.EvolutionOptimizationStrategy) Ignite(org.apache.ignite.Ignite) EncoderTrainer(org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer) Vector(org.apache.ignite.ml.math.primitives.vector.Vector) CrossValidationResult(org.apache.ignite.ml.selection.cv.CrossValidationResult) ParamGrid(org.apache.ignite.ml.selection.paramgrid.ParamGrid) DecisionTreeClassificationTrainer(org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer) CrossValidation(org.apache.ignite.ml.selection.cv.CrossValidation)

Example 7 with EncoderTrainer

use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project ignite by apache.

the class TargetEncoderExample method main.

/**
 * Run example.
 */
public static void main(String[] args) {
    System.out.println();
    System.out.println(">>> Train Gradient Boosing Decision Tree model on amazon-employee-access-challenge_train.csv dataset.");
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        try {
            IgniteCache<Integer, Object[]> dataCache = new SandboxMLCache(ignite).fillObjectCacheWithCategoricalData(MLSandboxDatasets.AMAZON_EMPLOYEE_ACCESS);
            Set<Integer> featuresIndexies = new HashSet<>(Arrays.asList(1, 2, 3, 4, 5, 6, 7, 8, 9));
            Set<Integer> targetEncodedfeaturesIndexies = new HashSet<>(Arrays.asList(1, 5, 6));
            Integer targetIndex = 0;
            final Vectorizer<Integer, Object[], Integer, Object> vectorizer = new ObjectArrayVectorizer<Integer>(featuresIndexies.toArray(new Integer[0])).labeled(targetIndex);
            Preprocessor<Integer, Object[]> strEncoderPreprocessor = new EncoderTrainer<Integer, Object[]>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(0).withEncodedFeatures(featuresIndexies).fit(ignite, dataCache, vectorizer);
            Preprocessor<Integer, Object[]> targetEncoderProcessor = new EncoderTrainer<Integer, Object[]>().withEncoderType(EncoderType.TARGET_ENCODER).labeled(0).withEncodedFeatures(targetEncodedfeaturesIndexies).minSamplesLeaf(1).minCategorySize(1L).smoothing(1d).fit(ignite, dataCache, strEncoderPreprocessor);
            Preprocessor<Integer, Object[]> lbEncoderPreprocessor = new EncoderTrainer<Integer, Object[]>().withEncoderType(EncoderType.LABEL_ENCODER).fit(ignite, dataCache, targetEncoderProcessor);
            GDBTrainer trainer = new GDBBinaryClassifierOnTreesTrainer(0.5, 500, 4, 0.).withCheckConvergenceStgyFactory(new MedianOfMedianConvergenceCheckerFactory(0.1));
            // Train model.
            ModelsComposition mdl = trainer.fit(ignite, dataCache, lbEncoderPreprocessor);
            System.out.println("\n>>> Trained model: " + mdl);
            double accuracy = Evaluator.evaluate(dataCache, mdl, lbEncoderPreprocessor, new Accuracy());
            System.out.println("\n>>> Accuracy " + accuracy);
            System.out.println("\n>>> Test Error " + (1 - accuracy));
            System.out.println(">>> Train Gradient Boosing Decision Tree model on amazon-employee-access-challenge_train.csv dataset.");
        } catch (FileNotFoundException e) {
            e.printStackTrace();
        }
    } finally {
        System.out.flush();
    }
}
Also used : SandboxMLCache(org.apache.ignite.examples.ml.util.SandboxMLCache) GDBTrainer(org.apache.ignite.ml.composition.boosting.GDBTrainer) FileNotFoundException(java.io.FileNotFoundException) ModelsComposition(org.apache.ignite.ml.composition.ModelsComposition) GDBBinaryClassifierOnTreesTrainer(org.apache.ignite.ml.tree.boosting.GDBBinaryClassifierOnTreesTrainer) Accuracy(org.apache.ignite.ml.selection.scoring.metric.classification.Accuracy) MedianOfMedianConvergenceCheckerFactory(org.apache.ignite.ml.composition.boosting.convergence.median.MedianOfMedianConvergenceCheckerFactory) Ignite(org.apache.ignite.Ignite) EncoderTrainer(org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer) HashSet(java.util.HashSet)

Example 8 with EncoderTrainer

use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project ignite by apache.

the class Step_11_Boosting method main.

/**
 * Run example.
 */
public static void main(String[] args) {
    System.out.println();
    System.out.println(">>> Tutorial step 11 (Boosting) example started.");
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        try {
            IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
            // Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
            final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
            TrainTestSplit<Integer, Vector> split = new TrainTestDatasetSplitter<Integer, Vector>().split(0.75);
            Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(// <--- Changed index here.
            6).fit(ignite, dataCache, vectorizer);
            Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
            Preprocessor<Integer, Vector> minMaxScalerPreprocessor = new MinMaxScalerTrainer<Integer, Vector>().fit(ignite, dataCache, imputingPreprocessor);
            Preprocessor<Integer, Vector> normalizationPreprocessor = new NormalizationTrainer<Integer, Vector>().withP(1).fit(ignite, dataCache, minMaxScalerPreprocessor);
            // Create classification trainer.
            GDBTrainer trainer = new GDBBinaryClassifierOnTreesTrainer(0.5, 500, 4, 0.).withCheckConvergenceStgyFactory(new MedianOfMedianConvergenceCheckerFactory(0.1));
            // Train decision tree model.
            GDBModel mdl = trainer.fit(ignite, dataCache, split.getTrainFilter(), normalizationPreprocessor);
            System.out.println("\n>>> Trained model: " + mdl.toString(true));
            double accuracy = Evaluator.evaluate(dataCache, split.getTestFilter(), mdl, normalizationPreprocessor, MetricName.ACCURACY);
            System.out.println("\n>>> Accuracy " + accuracy);
            System.out.println("\n>>> Test Error " + (1 - accuracy));
            System.out.println(">>> Tutorial step 11 (Boosting) example completed.");
        } catch (FileNotFoundException e) {
            e.printStackTrace();
        }
    } finally {
        System.out.flush();
    }
}
Also used : GDBTrainer(org.apache.ignite.ml.composition.boosting.GDBTrainer) GDBModel(org.apache.ignite.ml.composition.boosting.GDBModel) FileNotFoundException(java.io.FileNotFoundException) NormalizationTrainer(org.apache.ignite.ml.preprocessing.normalization.NormalizationTrainer) GDBBinaryClassifierOnTreesTrainer(org.apache.ignite.ml.tree.boosting.GDBBinaryClassifierOnTreesTrainer) MedianOfMedianConvergenceCheckerFactory(org.apache.ignite.ml.composition.boosting.convergence.median.MedianOfMedianConvergenceCheckerFactory) Ignite(org.apache.ignite.Ignite) EncoderTrainer(org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer) Vector(org.apache.ignite.ml.math.primitives.vector.Vector)

Example 9 with EncoderTrainer

use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project ignite by apache.

the class Step_3_Categorial method main.

/**
 * Run example.
 */
public static void main(String[] args) {
    System.out.println();
    System.out.println(">>> Tutorial step 3 (categorial) example started.");
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        try {
            IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
            // "pclass", "sibsp", "parch", "sex", "embarked"
            final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 5, 6, 10).labeled(1);
            Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(4).fit(ignite, dataCache, vectorizer);
            Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
            DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer(5, 0);
            // Train decision tree model.
            DecisionTreeModel mdl = trainer.fit(ignite, dataCache, imputingPreprocessor);
            System.out.println("\n>>> Trained model: " + mdl);
            double accuracy = Evaluator.evaluate(dataCache, mdl, imputingPreprocessor, new Accuracy<>());
            System.out.println("\n>>> Accuracy " + accuracy);
            System.out.println("\n>>> Test Error " + (1 - accuracy));
            System.out.println(">>> Tutorial step 3 (categorial) example completed.");
        } catch (FileNotFoundException e) {
            e.printStackTrace();
        }
    } finally {
        System.out.flush();
    }
}
Also used : DecisionTreeModel(org.apache.ignite.ml.tree.DecisionTreeModel) FileNotFoundException(java.io.FileNotFoundException) DecisionTreeClassificationTrainer(org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer) Ignite(org.apache.ignite.Ignite) EncoderTrainer(org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer) Vector(org.apache.ignite.ml.math.primitives.vector.Vector)

Example 10 with EncoderTrainer

use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project ignite by apache.

the class Step_4_Add_age_fare method main.

/**
 * Run example.
 */
public static void main(String[] args) {
    System.out.println();
    System.out.println(">>> Tutorial step 4 (add age and fare) example started.");
    try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
        try {
            IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
            // Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
            final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
            Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(// <--- Changed index here.
            6).fit(ignite, dataCache, vectorizer);
            Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
            DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer(5, 0);
            // Train decision tree model.
            DecisionTreeModel mdl = trainer.fit(ignite, dataCache, imputingPreprocessor);
            System.out.println("\n>>> Trained model: " + mdl);
            double accuracy = Evaluator.evaluate(dataCache, mdl, imputingPreprocessor, new Accuracy<>());
            System.out.println("\n>>> Accuracy " + accuracy);
            System.out.println("\n>>> Test Error " + (1 - accuracy));
            System.out.println(">>> Tutorial step 4 (add age and fare) example completed.");
        } catch (FileNotFoundException e) {
            e.printStackTrace();
        }
    } finally {
        System.out.flush();
    }
}
Also used : DecisionTreeModel(org.apache.ignite.ml.tree.DecisionTreeModel) FileNotFoundException(java.io.FileNotFoundException) DecisionTreeClassificationTrainer(org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer) Ignite(org.apache.ignite.Ignite) EncoderTrainer(org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer) Vector(org.apache.ignite.ml.math.primitives.vector.Vector)

Aggregations

FileNotFoundException (java.io.FileNotFoundException)32 Ignite (org.apache.ignite.Ignite)32 EncoderTrainer (org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer)32 Vector (org.apache.ignite.ml.math.primitives.vector.Vector)30 DecisionTreeClassificationTrainer (org.apache.ignite.ml.tree.DecisionTreeClassificationTrainer)27 NormalizationTrainer (org.apache.ignite.ml.preprocessing.normalization.NormalizationTrainer)21 CrossValidation (org.apache.ignite.ml.selection.cv.CrossValidation)15 CrossValidationResult (org.apache.ignite.ml.selection.cv.CrossValidationResult)13 ParamGrid (org.apache.ignite.ml.selection.paramgrid.ParamGrid)13 DecisionTreeModel (org.apache.ignite.ml.tree.DecisionTreeModel)12 DecisionTreeNode (org.apache.ignite.ml.tree.DecisionTreeNode)12 Accuracy (org.apache.ignite.ml.selection.scoring.metric.classification.Accuracy)10 SerializableDoubleConsumer (org.apache.ignite.examples.ml.util.SerializableDoubleConsumer)7 Arrays (java.util.Arrays)6 IgniteCache (org.apache.ignite.IgniteCache)6 Ignition (org.apache.ignite.Ignition)6 SerializableFunction (org.apache.ignite.examples.ml.util.SerializableFunction)6 Vectorizer (org.apache.ignite.ml.dataset.feature.extractor.Vectorizer)6 DummyVectorizer (org.apache.ignite.ml.dataset.feature.extractor.impl.DummyVectorizer)6 Preprocessor (org.apache.ignite.ml.preprocessing.Preprocessor)6