use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project gridgain by gridgain.
the class Step_10_RandomSearch method main.
/**
* Run example.
*/
public static void main(String[] args) {
System.out.println();
System.out.println(">>> Tutorial step 10 (Random Search) example started.");
try (Ignite ignite = Ignition.start("examples-ml/config/example-ignite.xml")) {
try {
IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
// Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
TrainTestSplit<Integer, Vector> split = new TrainTestDatasetSplitter<Integer, Vector>().split(0.75);
Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(6).fit(ignite, dataCache, vectorizer);
Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
Preprocessor<Integer, Vector> minMaxScalerPreprocessor = new MinMaxScalerTrainer<Integer, Vector>().fit(ignite, dataCache, imputingPreprocessor);
NormalizationTrainer<Integer, Vector> normalizationTrainer = new NormalizationTrainer<Integer, Vector>().withP(1);
Preprocessor<Integer, Vector> normalizationPreprocessor = normalizationTrainer.fit(ignite, dataCache, minMaxScalerPreprocessor);
// Tune hyperparams with K-fold Cross-Validation on the split training set.
DecisionTreeClassificationTrainer trainerCV = new DecisionTreeClassificationTrainer();
CrossValidation<DecisionTreeNode, Double, Integer, Vector> scoreCalculator = new CrossValidation<>();
SerializableDoubleConsumer maxDeep = trainerCV::withMaxDeep;
SerializableDoubleConsumer minImpurityDecrease = trainerCV::withMinImpurityDecrease;
SerializableDoubleConsumer p = normalizationTrainer::withP;
ParamGrid paramGrid = new ParamGrid().withParameterSearchStrategy(new RandomStrategy().withMaxTries(10).withSeed(12L)).addHyperParam("p", p, new Double[] { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 }).addHyperParam("maxDeep", maxDeep, new Double[] { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 }).addHyperParam("minImpurityDecrease", minImpurityDecrease, new Double[] { 0.0, 0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0 });
SerializableFunction<BinaryClassificationMetricValues, Double> acc = m -> m.accuracy();
BinaryClassificationMetrics metrics = (BinaryClassificationMetrics) new BinaryClassificationMetrics().withNegativeClsLb(0.0).withPositiveClsLb(1.0).withMetric(acc);
scoreCalculator.withIgnite(ignite).withUpstreamCache(dataCache).withTrainer(trainerCV).withMetric(metrics).withFilter(split.getTrainFilter()).isRunningOnPipeline(false).withPreprocessor(normalizationPreprocessor).withAmountOfFolds(3).withParamGrid(paramGrid);
CrossValidationResult crossValidationRes = scoreCalculator.tuneHyperParamterers();
System.out.println("Train with maxDeep: " + crossValidationRes.getBest("maxDeep") + " and minImpurityDecrease: " + crossValidationRes.getBest("minImpurityDecrease"));
DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer().withMaxDeep(crossValidationRes.getBest("maxDeep")).withMinImpurityDecrease(crossValidationRes.getBest("minImpurityDecrease"));
System.out.println(crossValidationRes);
System.out.println("Best score: " + Arrays.toString(crossValidationRes.getBestScore()));
System.out.println("Best hyper params: " + crossValidationRes.getBestHyperParams());
System.out.println("Best average score: " + crossValidationRes.getBestAvgScore());
crossValidationRes.getScoringBoard().forEach((hyperParams, score) -> System.out.println("Score " + Arrays.toString(score) + " for hyper params " + hyperParams));
// Train decision tree model.
DecisionTreeNode bestMdl = trainer.fit(ignite, dataCache, split.getTrainFilter(), normalizationPreprocessor);
System.out.println("\n>>> Trained model: " + bestMdl);
double accuracy = Evaluator.evaluate(dataCache, split.getTestFilter(), bestMdl, normalizationPreprocessor, new Accuracy<>());
System.out.println("\n>>> Accuracy " + accuracy);
System.out.println("\n>>> Test Error " + (1 - accuracy));
System.out.println(">>> Tutorial step 10 (Random Search) example completed.");
} catch (FileNotFoundException e) {
e.printStackTrace();
}
} finally {
System.out.flush();
}
}
use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project gridgain by gridgain.
the class Step_5_Scaling method main.
/**
* Run example.
*/
public static void main(String[] args) {
System.out.println();
System.out.println(">>> Tutorial step 5 (scaling) example started.");
try (Ignite ignite = Ignition.start("examples-ml/config/example-ignite.xml")) {
try {
IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
// Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(// <--- Changed index here.
6).fit(ignite, dataCache, vectorizer);
Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
Preprocessor<Integer, Vector> minMaxScalerPreprocessor = new MinMaxScalerTrainer<Integer, Vector>().fit(ignite, dataCache, imputingPreprocessor);
Preprocessor<Integer, Vector> normalizationPreprocessor = new NormalizationTrainer<Integer, Vector>().withP(1).fit(ignite, dataCache, minMaxScalerPreprocessor);
DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer(5, 0);
// Train decision tree model.
DecisionTreeNode mdl = trainer.fit(ignite, dataCache, normalizationPreprocessor);
System.out.println("\n>>> Trained model: " + mdl);
double accuracy = Evaluator.evaluate(dataCache, mdl, normalizationPreprocessor, new Accuracy<>());
System.out.println("\n>>> Accuracy " + accuracy);
System.out.println("\n>>> Test Error " + (1 - accuracy));
System.out.println(">>> Tutorial step 5 (scaling) example completed.");
} catch (FileNotFoundException e) {
e.printStackTrace();
}
} finally {
System.out.flush();
}
}
use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project gridgain by gridgain.
the class Step_6_KNN method main.
/**
* Run example.
*/
public static void main(String[] args) {
System.out.println();
System.out.println(">>> Tutorial step 6 (kNN) example started.");
try (Ignite ignite = Ignition.start("examples-ml/config/example-ignite.xml")) {
try {
IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
// Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(// <--- Changed index here.
6).fit(ignite, dataCache, vectorizer);
Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
Preprocessor<Integer, Vector> minMaxScalerPreprocessor = new MinMaxScalerTrainer<Integer, Vector>().fit(ignite, dataCache, imputingPreprocessor);
Preprocessor<Integer, Vector> normalizationPreprocessor = new NormalizationTrainer<Integer, Vector>().withP(1).fit(ignite, dataCache, minMaxScalerPreprocessor);
KNNClassificationTrainer trainer = new KNNClassificationTrainer().withK(1).withWeighted(true);
// Train KNN tree model.
KNNClassificationModel mdl = trainer.fit(ignite, dataCache, normalizationPreprocessor);
System.out.println("\n>>> Trained model: " + mdl);
double accuracy = Evaluator.evaluate(dataCache, mdl, normalizationPreprocessor, new Accuracy<>());
System.out.println("\n>>> Accuracy " + accuracy);
System.out.println("\n>>> Test Error " + (1 - accuracy));
System.out.println(">>> Tutorial step 6 (kNN) example completed.");
} catch (FileNotFoundException e) {
e.printStackTrace();
}
} finally {
System.out.flush();
}
}
use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project gridgain by gridgain.
the class Step_13_Genetic_Programming_Search method main.
/**
* Run example.
*/
public static void main(String[] args) {
System.out.println();
System.out.println(">>> Tutorial step 13 (Genetic Programming) example started.");
try (Ignite ignite = Ignition.start("examples-ml/config/example-ignite.xml")) {
try {
IgniteCache<Integer, Vector> dataCache = TitanicUtils.readPassengers(ignite);
// Extracts "pclass", "sibsp", "parch", "sex", "embarked", "age", "fare".
final Vectorizer<Integer, Vector, Integer, Double> vectorizer = new DummyVectorizer<Integer>(0, 3, 4, 5, 6, 8, 10).labeled(1);
TrainTestSplit<Integer, Vector> split = new TrainTestDatasetSplitter<Integer, Vector>().split(0.75);
Preprocessor<Integer, Vector> strEncoderPreprocessor = new EncoderTrainer<Integer, Vector>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(1).withEncodedFeature(6).fit(ignite, dataCache, vectorizer);
Preprocessor<Integer, Vector> imputingPreprocessor = new ImputerTrainer<Integer, Vector>().fit(ignite, dataCache, strEncoderPreprocessor);
Preprocessor<Integer, Vector> minMaxScalerPreprocessor = new MinMaxScalerTrainer<Integer, Vector>().fit(ignite, dataCache, imputingPreprocessor);
NormalizationTrainer<Integer, Vector> normalizationTrainer = new NormalizationTrainer<Integer, Vector>().withP(1);
Preprocessor<Integer, Vector> normalizationPreprocessor = normalizationTrainer.fit(ignite, dataCache, minMaxScalerPreprocessor);
// Tune hyperparams with K-fold Cross-Validation on the split training set.
DecisionTreeClassificationTrainer trainerCV = new DecisionTreeClassificationTrainer();
CrossValidation<DecisionTreeNode, Double, Integer, Vector> scoreCalculator = new CrossValidation<>();
SerializableDoubleConsumer maxDeep = trainerCV::withMaxDeep;
SerializableDoubleConsumer minImpurityDecrease = trainerCV::withMinImpurityDecrease;
SerializableDoubleConsumer p = normalizationTrainer::withP;
ParamGrid paramGrid = new ParamGrid().withParameterSearchStrategy(new EvolutionOptimizationStrategy()).addHyperParam("p", p, new Double[] { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 }).addHyperParam("maxDeep", maxDeep, new Double[] { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 }).addHyperParam("minImpurityDecrease", minImpurityDecrease, new Double[] { 0.0, 0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0 });
SerializableFunction<BinaryClassificationMetricValues, Double> acc = m -> m.accuracy();
BinaryClassificationMetrics metrics = (BinaryClassificationMetrics) new BinaryClassificationMetrics().withNegativeClsLb(0.0).withPositiveClsLb(1.0).withMetric(acc);
scoreCalculator.withIgnite(ignite).withUpstreamCache(dataCache).withTrainer(trainerCV).withMetric(metrics).withFilter(split.getTrainFilter()).isRunningOnPipeline(false).withPreprocessor(normalizationPreprocessor).withAmountOfFolds(3).withParamGrid(paramGrid);
CrossValidationResult crossValidationRes = scoreCalculator.tuneHyperParamterers();
System.out.println("Train with maxDeep: " + crossValidationRes.getBest("maxDeep") + " and minImpurityDecrease: " + crossValidationRes.getBest("minImpurityDecrease"));
DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer().withMaxDeep(crossValidationRes.getBest("maxDeep")).withMinImpurityDecrease(crossValidationRes.getBest("minImpurityDecrease"));
System.out.println(crossValidationRes);
System.out.println("Best score: " + Arrays.toString(crossValidationRes.getBestScore()));
System.out.println("Best hyper params: " + crossValidationRes.getBestHyperParams());
System.out.println("Best average score: " + crossValidationRes.getBestAvgScore());
crossValidationRes.getScoringBoard().forEach((hyperParams, score) -> System.out.println("Score " + Arrays.toString(score) + " for hyper params " + hyperParams));
// Train decision tree model.
DecisionTreeNode bestMdl = trainer.fit(ignite, dataCache, split.getTrainFilter(), normalizationPreprocessor);
System.out.println("\n>>> Trained model: " + bestMdl);
double accuracy = Evaluator.evaluate(dataCache, split.getTestFilter(), bestMdl, normalizationPreprocessor, new Accuracy<>());
System.out.println("\n>>> Accuracy " + accuracy);
System.out.println("\n>>> Test Error " + (1 - accuracy));
System.out.println(">>> Tutorial step 13 (Genetic Programming) example completed.");
} catch (FileNotFoundException e) {
e.printStackTrace();
}
} finally {
System.out.flush();
}
}
use of org.apache.ignite.ml.preprocessing.encoding.EncoderTrainer in project ignite by apache.
the class LabelEncoderExample method main.
/**
* Run example.
*/
public static void main(String[] args) {
System.out.println();
System.out.println(">>> Train Decision Tree model on mushrooms.csv dataset.");
try (Ignite ignite = Ignition.start("examples/config/example-ignite.xml")) {
try {
IgniteCache<Integer, Object[]> dataCache = new SandboxMLCache(ignite).fillObjectCacheWithCategoricalData(MLSandboxDatasets.MUSHROOMS);
final Vectorizer<Integer, Object[], Integer, Object> vectorizer = new ObjectArrayVectorizer<Integer>(1, 2).labeled(0);
Preprocessor<Integer, Object[]> strEncoderPreprocessor = new EncoderTrainer<Integer, Object[]>().withEncoderType(EncoderType.STRING_ENCODER).withEncodedFeature(0).withEncodedFeature(1).fit(ignite, dataCache, vectorizer);
Preprocessor<Integer, Object[]> lbEncoderPreprocessor = new EncoderTrainer<Integer, Object[]>().withEncoderType(EncoderType.LABEL_ENCODER).fit(ignite, dataCache, strEncoderPreprocessor);
DecisionTreeClassificationTrainer trainer = new DecisionTreeClassificationTrainer(5, 0);
// Train decision tree model.
DecisionTreeModel mdl = trainer.fit(ignite, dataCache, lbEncoderPreprocessor);
System.out.println("\n>>> Trained model: " + mdl);
double accuracy = Evaluator.evaluate(dataCache, mdl, lbEncoderPreprocessor, new Accuracy());
System.out.println("\n>>> Accuracy " + accuracy);
System.out.println("\n>>> Test Error " + (1 - accuracy));
System.out.println(">>> Train Decision Tree model on mushrooms.csv dataset.");
} catch (FileNotFoundException e) {
e.printStackTrace();
}
} finally {
System.out.flush();
}
}
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