use of org.apache.jena.riot.lang.LabelToNode in project jena by apache.
the class AbstractLineBasedNodeTupleReader method initialize.
@Override
public final void initialize(InputSplit genericSplit, TaskAttemptContext context) throws IOException {
LOG.debug("initialize({}, {})", genericSplit, context);
// Assuming file split
if (!(genericSplit instanceof FileSplit))
throw new IOException("This record reader only supports FileSplit inputs");
FileSplit split = (FileSplit) genericSplit;
// Intermediate : RDFParser but need to make a Iterator<Quad/Triple>
LabelToNode labelToNode = RdfIOUtils.createLabelToNode(context, split.getPath());
maker = new ParserProfileStd(RiotLib.factoryRDF(labelToNode), ErrorHandlerFactory.errorHandlerStd, IRIResolver.create(), PrefixMapFactory.createForInput(), null, true, false);
Configuration config = context.getConfiguration();
this.ignoreBadTuples = config.getBoolean(RdfIOConstants.INPUT_IGNORE_BAD_TUPLES, true);
if (this.ignoreBadTuples)
LOG.warn("Configured to ignore bad tuples, parsing errors will be logged and the bad line skipped but no errors will be thrownConsider setting {} to false to disable this behaviour", RdfIOConstants.INPUT_IGNORE_BAD_TUPLES);
// Figure out what portion of the file to read
this.maxLineLength = config.getInt(HadoopIOConstants.MAX_LINE_LENGTH, Integer.MAX_VALUE);
start = split.getStart();
end = start + split.getLength();
final Path file = split.getPath();
long totalLength = file.getFileSystem(context.getConfiguration()).getFileStatus(file).getLen();
compressionCodecs = new CompressionCodecFactory(config);
final CompressionCodec codec = compressionCodecs.getCodec(file);
LOG.info(String.format("Got split with start %d and length %d for file with total length of %d", new Object[] { start, split.getLength(), totalLength }));
// Open the file and seek to the start of the split
FileSystem fs = file.getFileSystem(config);
FSDataInputStream fileIn = fs.open(file);
boolean skipFirstLine = false;
if (codec != null) {
// Add 1 and verify we got complete split
if (totalLength > split.getLength() + 1)
throw new IOException("This record reader can only be used with compressed input where the split covers the whole file");
in = new LineReader(codec.createInputStream(fileIn), config);
estLength = end;
end = Long.MAX_VALUE;
} else {
// Uncompressed input
if (start != 0) {
skipFirstLine = true;
--start;
fileIn.seek(start);
}
in = new LineReader(fileIn, config);
}
// NLineInputFormat will provide the split information to use
if (skipFirstLine) {
start += in.readLine(new Text(), 0, (int) Math.min(Integer.MAX_VALUE, end - start));
}
this.pos = start;
}
use of org.apache.jena.riot.lang.LabelToNode in project jena by apache.
the class RdfIOUtils method createParserProfile.
/**
* Creates a parser profile for the given job context
*
* @param context
* Context
* @param path
* File path
* @return Parser profile
* @deprecated Legacy - use {@link #createRDFParserBuilder}.
*/
@Deprecated
public static ParserProfile createParserProfile(JobContext context, Path path) {
LabelToNode labelMapping = createLabelToNode(context, path);
ParserProfile profile = RiotLib.createParserProfile(RiotLib.factoryRDF(labelMapping), ErrorHandlerFactory.errorHandlerStd, IRIResolver.createNoResolve(), false);
return profile;
}
use of org.apache.jena.riot.lang.LabelToNode in project jena by apache.
the class RdfIOUtils method createRDFParserBuilder.
public static RDFParserBuilder createRDFParserBuilder(JobContext context, Path path) {
LabelToNode labelMapping = createLabelToNode(context, path);
RDFParserBuilder builder = RDFParser.create().labelToNode(labelMapping).errorHandler(ErrorHandlerFactory.errorHandlerStd);
return builder;
}
use of org.apache.jena.riot.lang.LabelToNode in project jena by apache.
the class RdfIOUtils method createLabelToNode.
public static LabelToNode createLabelToNode(JobContext context, Path path) {
UUID seed = RdfIOUtils.getSeed(context, path);
LabelToNode labelMapping = LabelToNode.createScopeByDocumentHash(seed);
return labelMapping;
}
use of org.apache.jena.riot.lang.LabelToNode in project jena by apache.
the class RiotLib method profile.
/**
* Create a parser profile for the given setup
*/
private static ParserProfile profile(String baseIRI, boolean resolveIRIs, boolean checking, ErrorHandler handler) {
LabelToNode labelToNode = SyntaxLabels.createLabelToNode();
IRIx base = resolveIRIs ? IRIs.resolveIRI(baseIRI) : IRIx.create(baseIRI);
IRIxResolver resolver = IRIxResolver.create(base).resolve(resolveIRIs).allowRelative(false).build();
return RiotLib.createParserProfile(factoryRDF(labelToNode), handler, resolver, checking);
}
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