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Example 1 with InsertTriples

use of org.apache.rya.indexing.pcj.fluo.api.InsertTriples in project incubator-rya by apache.

the class InputIT method historicThenStreamedResults.

/**
 * Simulates the case where a Triple is added to Rya, a new query that includes
 * that triple as a historic match is inserted into Fluo, and then some new
 * triple that matches the query is streamed into Fluo. The query's results
 * must include both the historic result and the newly streamed result.
 */
@Test
public void historicThenStreamedResults() throws Exception {
    // A query that finds people who talk to Eve and work at Chipotle.
    final String sparql = "SELECT ?x WHERE { " + "?x <http://talksTo> <http://Eve>. " + "?x <http://worksAt> <http://Chipotle>." + "}";
    // Triples that are loaded into Rya before the PCJ is created.
    final ValueFactory vf = new ValueFactoryImpl();
    final Set<Statement> historicTriples = Sets.newHashSet(vf.createStatement(vf.createURI("http://Alice"), vf.createURI("http://talksTo"), vf.createURI("http://Eve")), vf.createStatement(vf.createURI("http://Alice"), vf.createURI("http://worksAt"), vf.createURI("http://Chipotle")));
    // Triples that will be streamed into Fluo after the PCJ has been created.
    final Set<RyaStatement> streamedTriples = Sets.newHashSet(new RyaStatement(new RyaURI("http://Frank"), new RyaURI("http://talksTo"), new RyaURI("http://Eve")), new RyaStatement(new RyaURI("http://Frank"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")));
    // Load the historic data into Rya.
    final SailRepositoryConnection ryaConn = super.getRyaSailRepository().getConnection();
    for (final Statement triple : historicTriples) {
        ryaConn.add(triple);
    }
    ryaConn.close();
    // Create the PCJ table.
    final Connector accumuloConn = super.getAccumuloConnector();
    final PrecomputedJoinStorage pcjStorage = new AccumuloPcjStorage(accumuloConn, getRyaInstanceName());
    final String pcjId = pcjStorage.createPcj(sparql);
    try (FluoClient fluoClient = FluoFactory.newClient(super.getFluoConfiguration())) {
        // Tell the Fluo app to maintain the PCJ.
        new CreateFluoPcj().withRyaIntegration(pcjId, pcjStorage, fluoClient, accumuloConn, getRyaInstanceName());
        // Ensure Alice is a match.
        super.getMiniFluo().waitForObservers();
        final Set<BindingSet> expected = new HashSet<>();
        MapBindingSet bs = new MapBindingSet();
        bs.addBinding("x", vf.createURI("http://Alice"));
        expected.add(bs);
        Set<BindingSet> results = new HashSet<>();
        try (CloseableIterator<BindingSet> resultsIt = pcjStorage.listResults(pcjId)) {
            while (resultsIt.hasNext()) {
                results.add(resultsIt.next());
            }
        }
        assertEquals(expected, results);
        // Stream the data into Fluo.
        new InsertTriples().insert(fluoClient, streamedTriples, Optional.<String>absent());
        // Verify the end results of the query also include Frank.
        super.getMiniFluo().waitForObservers();
        bs = new MapBindingSet();
        bs.addBinding("x", vf.createURI("http://Frank"));
        expected.add(bs);
        results = new HashSet<>();
        try (CloseableIterator<BindingSet> resultsIt = pcjStorage.listResults(pcjId)) {
            while (resultsIt.hasNext()) {
                results.add(resultsIt.next());
            }
        }
        assertEquals(expected, results);
    }
}
Also used : Connector(org.apache.accumulo.core.client.Connector) MapBindingSet(org.openrdf.query.impl.MapBindingSet) BindingSet(org.openrdf.query.BindingSet) FluoClient(org.apache.fluo.api.client.FluoClient) AccumuloPcjStorage(org.apache.rya.indexing.pcj.storage.accumulo.AccumuloPcjStorage) InsertTriples(org.apache.rya.indexing.pcj.fluo.api.InsertTriples) Statement(org.openrdf.model.Statement) RyaStatement(org.apache.rya.api.domain.RyaStatement) ValueFactoryImpl(org.openrdf.model.impl.ValueFactoryImpl) RyaStatement(org.apache.rya.api.domain.RyaStatement) CreateFluoPcj(org.apache.rya.indexing.pcj.fluo.api.CreateFluoPcj) ValueFactory(org.openrdf.model.ValueFactory) SailRepositoryConnection(org.openrdf.repository.sail.SailRepositoryConnection) RyaURI(org.apache.rya.api.domain.RyaURI) PrecomputedJoinStorage(org.apache.rya.indexing.pcj.storage.PrecomputedJoinStorage) MapBindingSet(org.openrdf.query.impl.MapBindingSet) HashSet(java.util.HashSet) Test(org.junit.Test)

Example 2 with InsertTriples

use of org.apache.rya.indexing.pcj.fluo.api.InsertTriples in project incubator-rya by apache.

the class InputIT method streamedResults.

/**
 * Ensure streamed matches are included in the result.
 */
@Test
public void streamedResults() throws Exception {
    // A query that finds people who talk to Eve and work at Chipotle.
    final String sparql = "SELECT ?x WHERE { " + "?x <http://talksTo> <http://Eve>. " + "?x <http://worksAt> <http://Chipotle>." + "}";
    // Triples that will be streamed into Fluo after the PCJ has been created.
    final Set<RyaStatement> streamedTriples = Sets.newHashSet(new RyaStatement(new RyaURI("http://Alice"), new RyaURI("http://talksTo"), new RyaURI("http://Eve")), new RyaStatement(new RyaURI("http://Bob"), new RyaURI("http://talksTo"), new RyaURI("http://Eve")), new RyaStatement(new RyaURI("http://Charlie"), new RyaURI("http://talksTo"), new RyaURI("http://Eve")), new RyaStatement(new RyaURI("http://Eve"), new RyaURI("http://helps"), new RyaURI("http://Kevin")), new RyaStatement(new RyaURI("http://Bob"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")), new RyaStatement(new RyaURI("http://Charlie"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")), new RyaStatement(new RyaURI("http://Eve"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")), new RyaStatement(new RyaURI("http://David"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")));
    // The expected results of the SPARQL query once the PCJ has been computed.
    final ValueFactory vf = new ValueFactoryImpl();
    final Set<BindingSet> expected = new HashSet<>();
    MapBindingSet bs = new MapBindingSet();
    bs.addBinding("x", vf.createURI("http://Bob"));
    expected.add(bs);
    bs = new MapBindingSet();
    bs.addBinding("x", vf.createURI("http://Charlie"));
    expected.add(bs);
    // Create the PCJ table.
    final Connector accumuloConn = super.getAccumuloConnector();
    final PrecomputedJoinStorage pcjStorage = new AccumuloPcjStorage(accumuloConn, getRyaInstanceName());
    final String pcjId = pcjStorage.createPcj(sparql);
    try (FluoClient fluoClient = FluoFactory.newClient(super.getFluoConfiguration())) {
        // Tell the Fluo app to maintain the PCJ.
        new CreateFluoPcj().withRyaIntegration(pcjId, pcjStorage, fluoClient, accumuloConn, getRyaInstanceName());
        // Ensure the query has no results yet.
        super.getMiniFluo().waitForObservers();
        try (CloseableIterator<BindingSet> resultsIt = pcjStorage.listResults(pcjId)) {
            assertFalse(resultsIt.hasNext());
        }
        // Stream the data into Fluo.
        new InsertTriples().insert(fluoClient, streamedTriples, Optional.<String>absent());
        // Verify the end results of the query match the expected results.
        super.getMiniFluo().waitForObservers();
        final HashSet<BindingSet> results = new HashSet<>();
        try (CloseableIterator<BindingSet> resultsIt = pcjStorage.listResults(pcjId)) {
            while (resultsIt.hasNext()) {
                results.add(resultsIt.next());
            }
        }
        assertEquals(expected, results);
    }
}
Also used : MapBindingSet(org.openrdf.query.impl.MapBindingSet) BindingSet(org.openrdf.query.BindingSet) Connector(org.apache.accumulo.core.client.Connector) FluoClient(org.apache.fluo.api.client.FluoClient) AccumuloPcjStorage(org.apache.rya.indexing.pcj.storage.accumulo.AccumuloPcjStorage) InsertTriples(org.apache.rya.indexing.pcj.fluo.api.InsertTriples) ValueFactoryImpl(org.openrdf.model.impl.ValueFactoryImpl) RyaStatement(org.apache.rya.api.domain.RyaStatement) CreateFluoPcj(org.apache.rya.indexing.pcj.fluo.api.CreateFluoPcj) ValueFactory(org.openrdf.model.ValueFactory) RyaURI(org.apache.rya.api.domain.RyaURI) PrecomputedJoinStorage(org.apache.rya.indexing.pcj.storage.PrecomputedJoinStorage) MapBindingSet(org.openrdf.query.impl.MapBindingSet) HashSet(java.util.HashSet) Test(org.junit.Test)

Example 3 with InsertTriples

use of org.apache.rya.indexing.pcj.fluo.api.InsertTriples in project incubator-rya by apache.

the class RyaExportIT method resultsExported.

@Test
public void resultsExported() throws Exception {
    final String sparql = "SELECT ?customer ?worker ?city " + "{ " + "FILTER(?customer = <http://Alice>) " + "FILTER(?city = <http://London>) " + "?customer <http://talksTo> ?worker. " + "?worker <http://livesIn> ?city. " + "?worker <http://worksAt> <http://Chipotle>. " + "}";
    // Triples that will be streamed into Fluo after the PCJ has been created.
    final ValueFactory vf = new ValueFactoryImpl();
    final Set<RyaStatement> streamedTriples = Sets.newHashSet(new RyaStatement(new RyaURI("http://Alice"), new RyaURI("http://talksTo"), new RyaURI("http://Bob")), new RyaStatement(new RyaURI("http://Bob"), new RyaURI("http://livesIn"), new RyaURI("http://London")), new RyaStatement(new RyaURI("http://Bob"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")), new RyaStatement(new RyaURI("http://Alice"), new RyaURI("http://talksTo"), new RyaURI("http://Charlie")), new RyaStatement(new RyaURI("http://Charlie"), new RyaURI("http://livesIn"), new RyaURI("http://London")), new RyaStatement(new RyaURI("http://Charlie"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")), new RyaStatement(new RyaURI("http://Alice"), new RyaURI("http://talksTo"), new RyaURI("http://David")), new RyaStatement(new RyaURI("http://David"), new RyaURI("http://livesIn"), new RyaURI("http://London")), new RyaStatement(new RyaURI("http://David"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")), new RyaStatement(new RyaURI("http://Alice"), new RyaURI("http://talksTo"), new RyaURI("http://Eve")), new RyaStatement(new RyaURI("http://Eve"), new RyaURI("http://livesIn"), new RyaURI("http://Leeds")), new RyaStatement(new RyaURI("http://Eve"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")), new RyaStatement(new RyaURI("http://Frank"), new RyaURI("http://talksTo"), new RyaURI("http://Alice")), new RyaStatement(new RyaURI("http://Frank"), new RyaURI("http://livesIn"), new RyaURI("http://London")), new RyaStatement(new RyaURI("http://Frank"), new RyaURI("http://worksAt"), new RyaURI("http://Chipotle")));
    // The expected results of the SPARQL query once the PCJ has been computed.
    final Set<BindingSet> expected = new HashSet<>();
    MapBindingSet bs = new MapBindingSet();
    bs.addBinding("customer", vf.createURI("http://Alice"));
    bs.addBinding("worker", vf.createURI("http://Bob"));
    bs.addBinding("city", vf.createURI("http://London"));
    expected.add(bs);
    bs = new MapBindingSet();
    bs.addBinding("customer", vf.createURI("http://Alice"));
    bs.addBinding("worker", vf.createURI("http://Charlie"));
    bs.addBinding("city", vf.createURI("http://London"));
    expected.add(bs);
    bs = new MapBindingSet();
    bs.addBinding("customer", vf.createURI("http://Alice"));
    bs.addBinding("worker", vf.createURI("http://David"));
    bs.addBinding("city", vf.createURI("http://London"));
    expected.add(bs);
    // Create the PCJ table.
    final Connector accumuloConn = super.getAccumuloConnector();
    final PrecomputedJoinStorage pcjStorage = new AccumuloPcjStorage(accumuloConn, getRyaInstanceName());
    final String pcjId = pcjStorage.createPcj(sparql);
    try (FluoClient fluoClient = FluoFactory.newClient(super.getFluoConfiguration())) {
        // Tell the Fluo app to maintain the PCJ.
        new CreateFluoPcj().withRyaIntegration(pcjId, pcjStorage, fluoClient, accumuloConn, getRyaInstanceName());
        // Stream the data into Fluo.
        new InsertTriples().insert(fluoClient, streamedTriples, Optional.<String>absent());
        // Fetch the exported results from Accumulo once the observers finish working.
        super.getMiniFluo().waitForObservers();
        // Fetch expected results from the PCJ table that is in Accumulo.
        final Set<BindingSet> results = Sets.newHashSet(pcjStorage.listResults(pcjId));
        // Verify the end results of the query match the expected results.
        assertEquals(expected, results);
    }
}
Also used : MapBindingSet(org.openrdf.query.impl.MapBindingSet) BindingSet(org.openrdf.query.BindingSet) Connector(org.apache.accumulo.core.client.Connector) FluoClient(org.apache.fluo.api.client.FluoClient) AccumuloPcjStorage(org.apache.rya.indexing.pcj.storage.accumulo.AccumuloPcjStorage) InsertTriples(org.apache.rya.indexing.pcj.fluo.api.InsertTriples) ValueFactoryImpl(org.openrdf.model.impl.ValueFactoryImpl) RyaStatement(org.apache.rya.api.domain.RyaStatement) CreateFluoPcj(org.apache.rya.indexing.pcj.fluo.api.CreateFluoPcj) ValueFactory(org.openrdf.model.ValueFactory) RyaURI(org.apache.rya.api.domain.RyaURI) PrecomputedJoinStorage(org.apache.rya.indexing.pcj.storage.PrecomputedJoinStorage) MapBindingSet(org.openrdf.query.impl.MapBindingSet) HashSet(java.util.HashSet) Test(org.junit.Test)

Example 4 with InsertTriples

use of org.apache.rya.indexing.pcj.fluo.api.InsertTriples in project incubator-rya by apache.

the class BatchIT method leftJoinBatchIntegrationTest.

@Test
public void leftJoinBatchIntegrationTest() throws Exception {
    final String sparql = "SELECT ?subject ?object1 ?object2 WHERE { ?subject <urn:predicate_1> ?object1; " + "OPTIONAL{ ?subject <urn:predicate_2> ?object2} } ";
    try (FluoClient fluoClient = new FluoClientImpl(getFluoConfiguration())) {
        RyaURI subj = new RyaURI("urn:subject_1");
        RyaStatement statement1 = new RyaStatement(subj, new RyaURI("urn:predicate_1"), null);
        RyaStatement statement2 = new RyaStatement(subj, new RyaURI("urn:predicate_2"), null);
        subj = new RyaURI("urn:subject_2");
        RyaStatement statement3 = new RyaStatement(subj, new RyaURI("urn:predicate_1"), null);
        Set<RyaStatement> statements1 = getRyaStatements(statement1, 10);
        Set<RyaStatement> statements2 = getRyaStatements(statement2, 10);
        Set<RyaStatement> statements3 = getRyaStatements(statement3, 10);
        // Create the PCJ table.
        final PrecomputedJoinStorage pcjStorage = new AccumuloPcjStorage(getAccumuloConnector(), getRyaInstanceName());
        final String pcjId = pcjStorage.createPcj(sparql);
        // Tell the Fluo app to maintain the PCJ and sets batch scan size for StatementPatterns to 5 and
        // batch size of joins to 5.
        String queryId = new CreateFluoPcj(5, 5).withRyaIntegration(pcjId, pcjStorage, fluoClient, getAccumuloConnector(), getRyaInstanceName()).getQueryId();
        List<String> ids = getNodeIdStrings(fluoClient, queryId);
        // Stream the data into Fluo.
        InsertTriples inserter = new InsertTriples();
        inserter.insert(fluoClient, statements1, Optional.absent());
        inserter.insert(fluoClient, statements2, Optional.absent());
        inserter.insert(fluoClient, statements3, Optional.absent());
        getMiniFluo().waitForObservers();
        verifyCounts(fluoClient, ids, Arrays.asList(110, 110, 110, 20, 10));
    }
}
Also used : RyaURI(org.apache.rya.api.domain.RyaURI) FluoClient(org.apache.fluo.api.client.FluoClient) FluoClientImpl(org.apache.fluo.core.client.FluoClientImpl) AccumuloPcjStorage(org.apache.rya.indexing.pcj.storage.accumulo.AccumuloPcjStorage) InsertTriples(org.apache.rya.indexing.pcj.fluo.api.InsertTriples) PrecomputedJoinStorage(org.apache.rya.indexing.pcj.storage.PrecomputedJoinStorage) RyaStatement(org.apache.rya.api.domain.RyaStatement) CreateFluoPcj(org.apache.rya.indexing.pcj.fluo.api.CreateFluoPcj) Test(org.junit.Test)

Example 5 with InsertTriples

use of org.apache.rya.indexing.pcj.fluo.api.InsertTriples in project incubator-rya by apache.

the class BatchIT method joinBatchIntegrationTest.

@Test
public void joinBatchIntegrationTest() throws Exception {
    final String sparql = "SELECT ?subject ?object1 ?object2 WHERE { ?subject <urn:predicate_1> ?object1; " + " <urn:predicate_2> ?object2 } ";
    try (FluoClient fluoClient = new FluoClientImpl(getFluoConfiguration())) {
        RyaURI subj = new RyaURI("urn:subject_1");
        RyaStatement statement1 = new RyaStatement(subj, new RyaURI("urn:predicate_1"), null);
        RyaStatement statement2 = new RyaStatement(subj, new RyaURI("urn:predicate_2"), null);
        Set<RyaStatement> statements1 = getRyaStatements(statement1, 15);
        Set<RyaStatement> statements2 = getRyaStatements(statement2, 15);
        // Create the PCJ table.
        final PrecomputedJoinStorage pcjStorage = new AccumuloPcjStorage(getAccumuloConnector(), getRyaInstanceName());
        final String pcjId = pcjStorage.createPcj(sparql);
        // Tell the Fluo app to maintain the PCJ and sets batch scan size for StatementPatterns to 5 and
        // batch size of joins to 5.
        String queryId = new CreateFluoPcj(5, 5).withRyaIntegration(pcjId, pcjStorage, fluoClient, getAccumuloConnector(), getRyaInstanceName()).getQueryId();
        List<String> ids = getNodeIdStrings(fluoClient, queryId);
        // Stream the data into Fluo.
        InsertTriples inserter = new InsertTriples();
        inserter.insert(fluoClient, statements1, Optional.absent());
        inserter.insert(fluoClient, statements2, Optional.absent());
        getMiniFluo().waitForObservers();
        verifyCounts(fluoClient, ids, Arrays.asList(225, 225, 225, 15, 15));
    }
}
Also used : RyaURI(org.apache.rya.api.domain.RyaURI) FluoClient(org.apache.fluo.api.client.FluoClient) FluoClientImpl(org.apache.fluo.core.client.FluoClientImpl) AccumuloPcjStorage(org.apache.rya.indexing.pcj.storage.accumulo.AccumuloPcjStorage) InsertTriples(org.apache.rya.indexing.pcj.fluo.api.InsertTriples) PrecomputedJoinStorage(org.apache.rya.indexing.pcj.storage.PrecomputedJoinStorage) RyaStatement(org.apache.rya.api.domain.RyaStatement) CreateFluoPcj(org.apache.rya.indexing.pcj.fluo.api.CreateFluoPcj) Test(org.junit.Test)

Aggregations

InsertTriples (org.apache.rya.indexing.pcj.fluo.api.InsertTriples)14 FluoClient (org.apache.fluo.api.client.FluoClient)13 Test (org.junit.Test)12 RyaStatement (org.apache.rya.api.domain.RyaStatement)11 RyaURI (org.apache.rya.api.domain.RyaURI)11 CreateFluoPcj (org.apache.rya.indexing.pcj.fluo.api.CreateFluoPcj)11 PrecomputedJoinStorage (org.apache.rya.indexing.pcj.storage.PrecomputedJoinStorage)11 AccumuloPcjStorage (org.apache.rya.indexing.pcj.storage.accumulo.AccumuloPcjStorage)11 FluoClientImpl (org.apache.fluo.core.client.FluoClientImpl)8 BindingSet (org.openrdf.query.BindingSet)6 MapBindingSet (org.openrdf.query.impl.MapBindingSet)6 HashSet (java.util.HashSet)5 Connector (org.apache.accumulo.core.client.Connector)5 ValueFactory (org.openrdf.model.ValueFactory)5 ValueFactoryImpl (org.openrdf.model.impl.ValueFactoryImpl)5 Statement (org.openrdf.model.Statement)3 QueryBindingSet (org.openrdf.query.algebra.evaluation.QueryBindingSet)3 Bytes (org.apache.fluo.api.data.Bytes)2 Span (org.apache.fluo.api.data.Span)2 VisibilityBindingSet (org.apache.rya.api.model.VisibilityBindingSet)2