Examples with DenseVector org.apache.spark.mllib.linalg.DenseVector used on opensource projects

Example 1 with DenseVector

use of org.apache.spark.mllib.linalg.DenseVector in project java_study by aloyschen.

the class GbdtAndLr method train.

/*
    * 获取GBDT模型组合后的特征输入到Lr模型中，训练LR模型
    * @param Path: 训练数据路径
     */
public void train(String Path) {
    JavaSparkContext jsc = getSc();
    ArrayList<ArrayList<Integer>> treeLeafArray = new ArrayList<>();
    Dataset<Row> all_data = Preprocessing(jsc, Path);
    JavaRDD<LabeledPoint> gbdt_data_labelpoint = load_gbdt_data(all_data);
    GradientBoostedTreesModel gbdt = train_gbdt(jsc, gbdt_data_labelpoint);
    DecisionTreeModel[] decisionTreeModels = gbdt.trees();
    // 获取GBDT每棵树的叶子索引
    for (int i = 0; i < this.maxIter; i++) {
        treeLeafArray.add(getLeafNodes(decisionTreeModels[i].topNode()));
    // System.out.println("叶子索引");
    // System.out.println(treeLeafArray.get(i));
    }
    JavaRDD<LabeledPoint> CombineFeatures = all_data.toJavaRDD().map(line -> {
        double[] newvaluesDouble;
        double[] features = new double[24];
        // 将dataset中每列特征值放入DenseVector中
        for (Integer i = 6; i < 18; i++) {
            org.apache.spark.mllib.linalg.DenseVector den = null;
            if (line.get(i) instanceof org.apache.spark.ml.linalg.Vector) {
                den = (DenseVector) Vectors.fromML((org.apache.spark.ml.linalg.DenseVector) line.get(i));
                features[i - 6] = den.toArray()[0];
            } else {
                features[i - 6] = Double.parseDouble(line.get(i).toString());
            }
        }
        DenseVector numerical_vector = new DenseVector(features);
        ArrayList<Double> newvaluesArray = new ArrayList<>();
        for (int i = 0; i < this.maxIter; i++) {
            int treePredict = predictModify(decisionTreeModels[i].topNode(), numerical_vector);
            int len = treeLeafArray.get(i).size();
            ArrayList<Double> treeArray = new ArrayList<>(len);
            // 数组所有值初始化为0，落在的叶子节点至为1
            for (int j = 0; j < len; j++) treeArray.add(j, 0d);
            treeArray.set(treeLeafArray.get(i).indexOf(treePredict), 1d);
            newvaluesArray.addAll(treeArray);
        }
        for (int i = 18; i < 29; i++) {
            SparseVector onehot_data = (SparseVector) Vectors.fromML((org.apache.spark.ml.linalg.SparseVector) line.get(i));
            DenseVector cat_data = onehot_data.toDense();
            for (int j = 0; j < cat_data.size(); j++) {
                newvaluesArray.add(cat_data.apply(j));
            }
        }
        newvaluesDouble = newvaluesArray.stream().mapToDouble(Double::doubleValue).toArray();
        DenseVector newdenseVector = new DenseVector(newvaluesDouble);
        return (new LabeledPoint(Double.valueOf(line.get(1).toString()), newdenseVector));
    });
    JavaRDD<LabeledPoint>[] splitsLR = CombineFeatures.randomSplit(new double[] { 0.7, 0.3 });
    JavaRDD<LabeledPoint> trainingDataLR = splitsLR[0];
    JavaRDD<LabeledPoint> testDataLR = splitsLR[1];
    System.out.println("Start train LR");
    LogisticRegressionModel LR = new LogisticRegressionWithLBFGS().setNumClasses(2).run(trainingDataLR.rdd()).clearThreshold();
    System.out.println("modelLR.weights().size():" + LR.weights().size());
    JavaPairRDD<Object, Object> test_LR = testDataLR.mapToPair((PairFunction<LabeledPoint, Object, Object>) labeledPoint -> {
        Tuple2<Object, Object> tuple2 = new Tuple2<>(LR.predict(labeledPoint.features()), labeledPoint.label());
        return tuple2;
    });
    BinaryClassificationMetrics test_metrics = new BinaryClassificationMetrics(test_LR.rdd());
    double test_auc = test_metrics.areaUnderROC();
    System.out.println("test data auc_score:" + test_auc);
    JavaPairRDD<Object, Object> train_LR = trainingDataLR.mapToPair((PairFunction<LabeledPoint, Object, Object>) labeledPoint -> {
        Tuple2<Object, Object> tuple2 = new Tuple2<>(LR.predict(labeledPoint.features()), labeledPoint.label());
        return tuple2;
    });
    BinaryClassificationMetrics train_metrics = new BinaryClassificationMetrics(train_LR.rdd());
    double train_auc = train_metrics.areaUnderROC();
    System.out.println("train data auc_score:" + train_auc);
    // 不同阈值下的精确度排序，取前十个输出
    JavaRDD<Tuple2<Object, Object>> precision = train_metrics.precisionByThreshold().toJavaRDD();
    JavaPairRDD<Object, Object> temp = JavaPairRDD.fromJavaRDD(precision);
    JavaPairRDD<Object, Object> swap = temp.mapToPair(Tuple2::swap);
    JavaPairRDD<Object, Object> precision_sort = swap.sortByKey(false);
    System.out.println("Precision by threshold: (Precision, Threshold)");
    for (int i = 0; i < 10; i++) {
        System.out.println(precision_sort.take(10).toArray()[i]);
    }
}

Example 2 with DenseVector

use of org.apache.spark.mllib.linalg.DenseVector in project java_study by aloyschen.

the class GbdtAndLr method load_gbdt_data.

/*
    * 读取正负样本训练数据，分成训练集和测试集
    * @Param Data_Path: 样本数据存放路径
    * @return Data: 经过预处理和标签特征处理之后的训练样本数据
     */
private JavaRDD<LabeledPoint> load_gbdt_data(Dataset<Row> data) {
    JavaRDD<LabeledPoint> numerical_labelpoint;
    if (data.rdd().isEmpty()) {
        System.exit(0);
    }
    JavaRDD<Row> numerical_row = data.toJavaRDD();
    numerical_labelpoint = numerical_row.map(row -> {
        // 总共12个连续特征给GBDT处理
        double[] features = new double[12];
        // 将dataset中每列特征值放入DenseVector中
        for (Integer i = 6; i < 18; i++) {
            org.apache.spark.mllib.linalg.DenseVector den = null;
            if (row.get(i) instanceof org.apache.spark.ml.linalg.Vector) {
                den = (DenseVector) Vectors.fromML((org.apache.spark.ml.linalg.DenseVector) row.get(i));
                features[i - 6] = den.toArray()[0];
            } else {
                features[i - 6] = Double.parseDouble(row.get(i).toString());
            }
        }
        DenseVector denseVector = new DenseVector(features);
        return new LabeledPoint(Double.valueOf(row.get(1).toString()), denseVector);
    });
    // //将预处理过的数据保存
    // List<LabeledPoint> data_save = data.collect();
    // try {
    // FileWriter fw = new FileWriter("./pre_data.txt");
    // BufferedWriter bufferedWriter = new BufferedWriter(fw);
    // for(LabeledPoint row_data : data_save){
    // double[] features = row_data.features().toArray();
    // for (Double element : features){
    // bufferedWriter.write(element.toString());
    // bufferedWriter.write(";");
    // }
    // bufferedWriter.write("\n");
    // }
    // bufferedWriter.close();
    // }catch (Exception e){
    // e.printStackTrace();
    // }
    System.out.println("Samples count:" + numerical_labelpoint.count());
    return numerical_labelpoint;
}