Examples with GATKException org.broadinstitute.hellbender.exceptions.GATKException used on opensource projects

Example 96 with GATKException

use of org.broadinstitute.hellbender.exceptions.GATKException in project gatk by broadinstitute.

the class CombineReadCounts method createMergeTemporalFile.

private File createMergeTemporalFile() {
    final File result;
    try {
        result = File.createTempFile("read-count-merge", ".tab");
    } catch (final IOException e) {
        throw new GATKException("Could not create temporal merge file", e);
    }
    result.deleteOnExit();
    return result;
}