Examples with RowSetRecord org.cytoscape.model.events.RowSetRecord used on opensource projects

Example 11 with RowSetRecord

use of org.cytoscape.model.events.RowSetRecord in project cytoscape-impl by cytoscape.

the class RowsSetViewUpdater method updateView.

private final void updateView(final RowsSetEvent e) {
    boolean refreshView = false;
    boolean refreshOtherViews = false;
    // Acquire services once to avoid performance overhead of repeated lookup
    final CyApplicationManager applicationManager = serviceRegistrar.getService(CyApplicationManager.class);
    final CyColumnIdentifierFactory columnIdentifierFactory = serviceRegistrar.getService(CyColumnIdentifierFactory.class);
    final CyNetworkViewManager networkViewManager = serviceRegistrar.getService(CyNetworkViewManager.class);
    final VisualMappingManager visualMappingManager = serviceRegistrar.getService(VisualMappingManager.class);
    final RenderingEngine<CyNetwork> renderer = applicationManager.getCurrentRenderingEngine();
    final CyNetwork network = applicationManager.getCurrentNetwork();
    if (network == null)
        return;
    // 1: Update current network view
    final Collection<CyNetworkView> views = networkViewManager.getNetworkViews(network);
    CyNetworkView networkView = null;
    if (views.isEmpty())
        return;
    else
        networkView = views.iterator().next();
    final VisualStyle vs = visualMappingManager.getVisualStyle(networkView);
    Map<CyRow, View<? extends CyIdentifiable>> rowViewMap = tracker.getRowViewMap(networkView);
    for (final RowSetRecord record : e.getPayloadCollection()) {
        final CyRow row = record.getRow();
        final String columnName = record.getColumn();
        final CyColumn column = row.getTable().getColumn(columnName);
        if (column == null)
            continue;
        final VirtualColumnInfo virtualColInfo = column.getVirtualColumnInfo();
        final boolean virtual = virtualColInfo.isVirtual();
        final View<? extends CyIdentifiable> v = rowViewMap.get(row);
        if (v == null)
            continue;
        if (v.getModel() instanceof CyNode) {
            final CyNode node = (CyNode) v.getModel();
            if (network.containsNode(node) && isStyleAffected(vs, columnName, renderer, columnIdentifierFactory)) {
                vs.apply(row, v);
                refreshView = false;
            }
        } else if (v.getModel() instanceof CyEdge) {
            final CyEdge edge = (CyEdge) v.getModel();
            if (network.containsEdge(edge) && isStyleAffected(vs, columnName, renderer, columnIdentifierFactory)) {
                vs.apply(row, v);
                refreshView = false;
            }
        }
        // If virtual, it may be used in other networks.
        if (refreshView && virtual)
            refreshOtherViews = true;
    // if (refreshView)
    // vs.apply(record.getRow(), (View<? extends CyIdentifiable>) v);
    }
    if (refreshView) {
        vs.apply(networkView);
        networkView.updateView();
        if (refreshOtherViews) {
            // Check other views. If update is required, set the flag.
            for (final CyNetworkView view : networkViewManager.getNetworkViewSet()) {
                if (view == networkView)
                    continue;
                final VisualStyle style = visualMappingManager.getVisualStyle(view);
                if (style == vs) {
                    // Same style is in use. Need to apply.
                    netViewMediator.setUpdateFlag(view);
                }
            }
        }
    }
}

Example 12 with RowSetRecord

use of org.cytoscape.model.events.RowSetRecord in project clusterMaker2 by RBVI.

the class TreeView method handleEvent.

public void handleEvent(RowsSetEvent e) {
    if (!e.containsColumn(CyNetwork.SELECTED))
        return;
    if (ignoreSelection) {
        return;
    }
    // System.out.println("Got selection event");
    CyTable table = e.getSource();
    CyNetwork net = networkTableManager.getNetworkForTable(table);
    Class<?> type = networkTableManager.getTableType(table);
    if (pendingSelections == null)
        pendingSelections = new HashSet<CyIdentifiable>();
    if (type.equals(CyNode.class)) {
        // if (dataModel.isSymmetrical()) return;
        for (RowSetRecord record : e.getColumnRecords(CyNetwork.SELECTED)) {
            Long nodeSUID = record.getRow().get(CyIdentifiable.SUID, Long.class);
            CyNode node = net.getNode(nodeSUID);
            if ((Boolean) record.getValue()) {
                if (node != null)
                    pendingSelections.add(node);
            } else if (pendingSelections.contains(node)) {
                pendingSelections.remove(node);
            }
        }
    /*
			List<CyNode> selectedNodes = CyTableUtil.getNodesInState(net, CyNetwork.SELECTED, true);
			setNodeSelection(selectedNodes, true);
			*/
    } else if (type.equals(CyEdge.class) && dataModel.isSymmetrical()) {
        // System.out.println("Edge selection");
        for (RowSetRecord record : e.getColumnRecords(CyNetwork.SELECTED)) {
            Long edgeSUID = record.getRow().get(CyIdentifiable.SUID, Long.class);
            CyEdge edge = net.getEdge(edgeSUID);
            if ((Boolean) record.getValue()) {
                if (edge != null)
                    pendingSelections.add(edge);
            } else if (pendingSelections.contains(edge)) {
                pendingSelections.remove(edge);
            }
        }
    // List<CyEdge> selectedEdges = CyTableUtil.getEdgesInState(net, CyNetwork.SELECTED, true);
    // setEdgeSelection(selectedEdges, true);
    }
    if (selectionTimer == null) {
        selectionTimer = new Timer(200, new ActionListener() {

            public void actionPerformed(ActionEvent evt) {
                // System.out.println("Selection Timer fired");
                List<CyEdge> edges = new ArrayList<CyEdge>();
                List<CyNode> nodes = new ArrayList<CyNode>();
                for (CyIdentifiable id : pendingSelections) {
                    if (CyEdge.class.isAssignableFrom(id.getClass())) {
                        edges.add((CyEdge) id);
                    } else if (CyNode.class.isAssignableFrom(id.getClass())) {
                        nodes.add((CyNode) id);
                    }
                }
                if (edges.size() > 0) {
                    setEdgeSelection(edges, true);
                // System.out.println("Selecting "+edges.size()+" edges");
                } else {
                    setNodeSelection(nodes, true);
                // System.out.println("Selecting "+nodes.size()+" nodes");
                }
            // pendingSelections.clear();
            }
        });
        selectionTimer.setCoalesce(true);
        selectionTimer.setRepeats(false);
        selectionTimer.start();
    } else if (selectionTimer.isRunning()) {
    // Don't do anything
    } else {
        selectionTimer.restart();
    }
}

Example 13 with RowSetRecord

use of org.cytoscape.model.events.RowSetRecord in project clusterMaker2 by RBVI.

the class NetworkSelectionLinker method handleEvent.

public void handleEvent(RowsSetEvent e) {
    if (!e.containsColumn(CyNetwork.SELECTED) || ignoreSelection)
        return;
    // System.out.println("Select");
    CyNetworkView currentNetworkView = clusterManager.getNetworkView();
    ignoreSelection = true;
    Map<CyNetwork, Boolean> stateMap = new HashMap<CyNetwork, Boolean>();
    for (CySubNetwork subNetwork : rootNetwork.getSubNetworkList()) {
        if (e.getSource().equals(subNetwork.getTable(CyNode.class, CyNetwork.LOCAL_ATTRS))) {
            for (RowSetRecord record : e.getColumnRecords(CyNetwork.SELECTED)) {
                Long suid = record.getRow().get(CyIdentifiable.SUID, Long.class);
                Boolean value = (Boolean) record.getValue();
                for (CySubNetwork sub2 : rootNetwork.getSubNetworkList()) {
                    if (subNetwork.equals(sub2) || sub2.getDefaultNodeTable().getRow(suid) == null)
                        continue;
                    // System.out.println("Selecting row "+suid);
                    sub2.getDefaultNodeTable().getRow(suid).set(CyNetwork.SELECTED, value);
                }
            }
        }
        if (viewManager.viewExists(subNetwork)) {
            for (CyNetworkView view : viewManager.getNetworkViews(subNetwork)) {
                if (!view.equals(currentNetworkView)) {
                    view.updateView();
                }
            }
        }
    }
    eventHelper.flushPayloadEvents();
    ignoreSelection = false;
}

Example 14 with RowSetRecord

use of org.cytoscape.model.events.RowSetRecord in project cytoscape-api by cytoscape.

the class AbstractViewUpdaterTest method testHandleEvent.

@Test
public void testHandleEvent() {
    rows = new ArrayList<RowSetRecord>();
    RowSetRecord rec1 = new RowSetRecord(row, "test", value, rawValue);
    rows.add(rec1);
    RowsSetEvent event = new RowsSetEvent(source, rows);
    updater.handleEvent(event);
    verify(row, times(0)).getAllValues();
}

Example 15 with RowSetRecord

use of org.cytoscape.model.events.RowSetRecord in project cytoscape-impl by cytoscape.

the class CyTableImpl method unSetX.

private void unSetX(final Object key, final String columnName) {
    synchronized (lock) {
        final String normalizedColName = normalizeColumnName(columnName);
        final VirtualColumn virtColumn = virtualColumnMap.get(normalizedColName);
        if (virtColumn != null)
            virtColumn.setValue(key, null);
        else {
            final ColumnData keyToValueMap = attributes.get(normalizedColName);
            if (!types.containsKey(normalizedColName) || keyToValueMap == null)
                throw new IllegalArgumentException("column: '" + columnName + "' does not yet exist.");
            final Object value = keyToValueMap.get(key);
            if (value == null)
                return;
            keyToValueMap.remove(key);
        }
    }
    if (fireEvents)
        eventHelper.addEventPayload((CyTable) this, new RowSetRecord(getRow(key), columnName, null, null), RowsSetEvent.class);
}