Examples with InstanceLocations org.dcm4chee.arc.store.InstanceLocations used on opensource projects

Example 21 with InstanceLocations

use of org.dcm4chee.arc.store.InstanceLocations in project dcm4chee-arc-light by dcm4che.

the class CopyToRetrieveCacheTask method copiedToRetrieveCache.

public InstanceLocations copiedToRetrieveCache() {
    try {
        LOG.debug("Wait for next finished copy to retrieve cache");
        InstanceLocations inst = completed.take().instanceLocations;
        if (inst == null)
            LOG.debug("No more copy to retrieve cache");
        else
            LOG.debug("Got next finished copy to retrieve cache");
        return inst;
    } catch (InterruptedException e) {
        LOG.error("Failed to wait for next finished copy to retrieve cache:", e);
        return null;
    }
}

Example 22 with InstanceLocations

use of org.dcm4chee.arc.store.InstanceLocations in project dcm4chee-arc-light by dcm4che.

the class IocmUtils method linkInstancesWithMWL.

static Attributes linkInstancesWithMWL(StoreSession session, RetrieveService retrieveService, ProcedureService procedureService, ProcedureContext ctx, QueryService queryService, RejectionNote rjNote, Attributes coerceAttrs, InputStream in) throws Exception {
    final Attributes result;
    String studyInstanceUID = ctx.getStudyInstanceUID();
    ArchiveAEExtension arcAE = session.getArchiveAEExtension();
    StoreService storeService = session.getStoreService();
    Attributes instanceRefs = parseSOPInstanceReferences(in);
    ctx.setSourceInstanceRefs(instanceRefs);
    restoreInstances(session, instanceRefs);
    Collection<InstanceLocations> instanceLocations = retrieveService.queryInstances(session, instanceRefs, studyInstanceUID);
    if (instanceLocations.isEmpty())
        return null;
    if (studyInstanceUID.equals(instanceRefs.getString(Tag.StudyInstanceUID))) {
        procedureService.updateStudySeriesAttributes(ctx);
        result = getResult(instanceLocations);
    } else {
        Attributes sopInstanceRefs = getSOPInstanceRefs(instanceRefs, instanceLocations, arcAE.getApplicationEntity());
        moveSequence(sopInstanceRefs, Tag.ReferencedSeriesSequence, instanceRefs);
        session.setAcceptConflictingPatientID(AcceptConflictingPatientID.YES);
        session.setPatientUpdatePolicy(Attributes.UpdatePolicy.PRESERVE);
        session.setStudyUpdatePolicy(arcAE.linkMWLEntryUpdatePolicy());
        result = storeService.copyInstances(session, instanceLocations, coerceAttrs, Attributes.UpdatePolicy.OVERWRITE);
        rejectInstances(instanceRefs, queryService, rjNote, session, result);
    }
    return result;
}

Example 23 with InstanceLocations

use of org.dcm4chee.arc.store.InstanceLocations in project dcm4chee-arc-light by dcm4che.

the class IocmUtils method copyMove.

static Attributes copyMove(StoreSession session, RetrieveService retrieveService, QueryService queryService, String studyInstanceUID, Attributes coerceAttrs, RejectionNote rjNote, InputStream in) throws Exception {
    ArchiveAEExtension arcAE = session.getArchiveAEExtension();
    StoreService storeService = session.getStoreService();
    Attributes instanceRefs = parseSOPInstanceReferences(in);
    restoreInstances(session, instanceRefs);
    Collection<InstanceLocations> instanceLocations = retrieveService.queryInstances(session, instanceRefs, studyInstanceUID);
    if (instanceLocations.isEmpty())
        return null;
    Attributes sopInstanceRefs = getSOPInstanceRefs(instanceRefs, instanceLocations, arcAE.getApplicationEntity());
    moveSequence(sopInstanceRefs, Tag.ReferencedSeriesSequence, instanceRefs);
    session.setAcceptConflictingPatientID(AcceptConflictingPatientID.YES);
    session.setPatientUpdatePolicy(Attributes.UpdatePolicy.PRESERVE);
    session.setStudyUpdatePolicy(arcAE.copyMoveUpdatePolicy());
    Attributes result = storeService.copyInstances(session, instanceLocations, coerceAttrs, Attributes.UpdatePolicy.MERGE);
    if (rjNote != null)
        rejectInstances(instanceRefs, queryService, rjNote, session, result);
    return result;
}

Example 24 with InstanceLocations

use of org.dcm4chee.arc.store.InstanceLocations in project dcm4chee-arc-light by dcm4che.

the class WadoRS method retrievePresentionState.

private void retrievePresentionState(RetrieveContext ctx) throws IOException {
    InstanceLocations inst = ctx.getMatches().iterator().next();
    if (ctx.copyToRetrieveCache(inst)) {
        ctx.copyToRetrieveCache(null);
        inst = ctx.copiedToRetrieveCache();
    }
    Attributes attrs;
    try (DicomInputStream dis = service.openDicomInputStream(ctx, inst)) {
        attrs = dis.readDataset();
        service.getAttributesCoercion(ctx, inst).coerce(attrs, null);
    } catch (IOException e) {
        throw e;
    } catch (Exception e) {
        throw new IOException(e);
    }
    Collection<InstanceLocations> matches = new ArrayList<>();
    for (Attributes series : attrs.getSequence(Tag.ReferencedSeriesSequence)) {
        ctx.setSeriesInstanceUIDs(series.getString(Tag.SeriesInstanceUID));
        ctx.setSopInstanceUIDs(series.getSequence(Tag.ReferencedImageSequence).stream().map(item -> item.getString(Tag.ReferencedSOPInstanceUID)).toArray(String[]::new));
        service.calculateMatches(ctx);
        matches.addAll(ctx.getMatches());
    }
    ctx.getMatches().clear();
    ctx.getMatches().addAll(matches);
    ctx.setNumberOfMatches(matches.size());
    presentationState = attrs;
}

Example 25 with InstanceLocations

use of org.dcm4chee.arc.store.InstanceLocations in project dcm4chee-arc-light by dcm4che.

the class WadoRS method matchPresentionState.

private static boolean matchPresentionState(RetrieveContext ctx) {
    InstanceLocations inst = ctx.getMatches().iterator().next();
    ArchiveDeviceExtension arcDev = ctx.getArchiveAEExtension().getArchiveDeviceExtension();
    return arcDev.isWadoSupportedPRClass(inst.getSopClassUID());
}