Examples with Tag org.dcm4che3.data.Tag used on opensource projects

Example 1 with Tag

use of org.dcm4che3.data.Tag in project karnak by OsiriX-Foundation.

the class Profile method applyAction.

public void applyAction(Attributes dcm, Attributes dcmCopy, HMAC hmac, ProfileItem profilePassedInSequence, ActionItem actionPassedInSequence, AttributeEditorContext context) {
    for (int tag : dcm.tags()) {
        VR vr = dcm.getVR(tag);
        final ExprCondition exprCondition = new ExprCondition(dcmCopy);
        ActionItem currentAction = null;
        ProfileItem currentProfile = null;
        for (ProfileItem profileEntity : profiles.stream().filter(p -> !(p instanceof CleanPixelData)).collect(Collectors.toList())) {
            currentProfile = profileEntity;
            if (profileEntity.getCondition() == null || profileEntity.getCodeName().equals(ProfileItemType.DEFACING.getClassAlias()) || profileEntity.getCodeName().equals(ProfileItemType.CLEAN_PIXEL_DATA.getClassAlias())) {
                currentAction = profileEntity.getAction(dcm, dcmCopy, tag, hmac);
            } else {
                boolean conditionIsOk = (Boolean) ExpressionResult.get(profileEntity.getCondition(), exprCondition, Boolean.class);
                if (conditionIsOk) {
                    currentAction = profileEntity.getAction(dcm, dcmCopy, tag, hmac);
                }
            }
            if (currentAction != null) {
                break;
            }
            if (profileEntity.equals(profilePassedInSequence)) {
                currentAction = actionPassedInSequence;
                break;
            }
        }
        if (!(currentAction instanceof Remove) && !(currentAction instanceof ReplaceNull) && vr == VR.SQ) {
            final ProfileItem finalCurrentProfile = currentProfile;
            final ActionItem finalCurrentAction = currentAction;
            Sequence seq = dcm.getSequence(tag);
            if (seq != null) {
                for (Attributes d : seq) {
                    applyAction(d, dcmCopy, hmac, finalCurrentProfile, finalCurrentAction, context);
                }
            }
        } else {
            if (currentAction != null) {
                try {
                    currentAction.execute(dcm, tag, hmac);
                } catch (final Exception e) {
                    LOGGER.error("Cannot execute the currentAction {} for tag: {}", currentAction, TagUtils.toString(tag), e);
                }
            }
        }
    }
}

Example 2 with Tag

use of org.dcm4che3.data.Tag in project karnak by OsiriX-Foundation.

the class MetadataDICOMObject method getValueRec.

private static String getValueRec(Attributes dcm, int tag) {
    String tagValue = dcm.getString(tag);
    Attributes dcmParent = dcm.getParent();
    if (dcmParent != null && tagValue == null) {
        return getValueRec(dcmParent, tag);
    }
    return tagValue;
}

Example 3 with Tag

use of org.dcm4che3.data.Tag in project karnak by OsiriX-Foundation.

the class AddTest method should_add_tag.

@Test
void should_add_tag() {
    // Init data
    Attributes attributes = new Attributes();
    Add add = new Add("symbol", 524294, VR.AE, "dummyValue");
    // Add tag
    add.execute(attributes, 524291, null);
    // Test result
    assertEquals("dummyValue", attributes.getString(524294));
}

Example 4 with Tag

use of org.dcm4che3.data.Tag in project karnak by OsiriX-Foundation.

the class ReplaceTest method should_replace_tag_not_null.

@Test
void should_replace_tag_not_null() {
    // Init data
    Attributes attributes = new Attributes();
    attributes.setString(524294, VR.AE, "initialValue");
    Replace replace = new Replace("symbol", "dummyValue");
    // Add tag
    replace.execute(attributes, 524294, null);
    // Test result
    assertEquals("dummyValue", attributes.getString(524294));
}

Example 5 with Tag

use of org.dcm4che3.data.Tag in project karnak by OsiriX-Foundation.

the class ProfileTest method xandZProfile.

@Test
void xandZProfile() {
    final Attributes dataset1 = new Attributes();
    final Attributes dataset2 = new Attributes();
    dataset1.setString(Tag.PatientName, VR.PN, "TEST-Expr-AddAction");
    dataset1.setString(Tag.StudyInstanceUID, VR.UI, "12345");
    dataset1.setString(Tag.PatientAge, VR.AS, "075Y");
    dataset2.setNull(Tag.PatientName, VR.PN);
    dataset2.setNull(Tag.StudyInstanceUID, VR.UI);
    dataset2.setString(Tag.PatientAge, VR.AS, "075Y");
    dataset2.remove(Tag.PatientAge);
    final ProfileEntity profileEntity = new ProfileEntity("TEST", "0.9.1", "0.9.1", "DPA");
    final ProfileElementEntity profileElementEntity = new ProfileElementEntity("Remove tag", "action.on.specific.tags", null, "X", null, 0, profileEntity);
    profileElementEntity.addIncludedTag(new IncludedTagEntity("(0010,1010)", profileElementEntity));
    profileEntity.addProfilePipe(profileElementEntity);
    final ProfileElementEntity profileElementEntity2 = new ProfileElementEntity("Replace by null", "action.on.specific.tags", null, "Z", null, 1, profileEntity);
    profileElementEntity2.addIncludedTag(new IncludedTagEntity("(xxxx,xxxx)", profileElementEntity2));
    profileEntity.addProfilePipe(profileElementEntity2);
    Profile profile = new Profile(profileEntity);
    profile.applyAction(dataset1, dataset1, defaultHMAC, null, null, null);
    assertTrue(DicomObjectTools.dicomObjectEquals(dataset2, dataset1));
}