Examples with MaskArea org.dcm4che3.img.op.MaskArea used on opensource projects

Example 1 with MaskArea

use of org.dcm4che3.img.op.MaskArea in project karnak by OsiriX-Foundation.

the class Profile method applyCleanPixelData.

public void applyCleanPixelData(Attributes dcmCopy, AttributeEditorContext context, ProfileEntity profileEntity) {
    Object pix = dcmCopy.getValue(Tag.PixelData);
    if ((pix instanceof BulkData || pix instanceof Fragments) && !profileEntity.getMaskEntities().isEmpty() && profiles.stream().anyMatch(p -> p instanceof CleanPixelData)) {
        String sopClassUID = dcmCopy.getString(Tag.SOPClassUID);
        if (!StringUtil.hasText(sopClassUID)) {
            throw new IllegalStateException("DICOM Object does not contain sopClassUID");
        }
        String scuPattern = sopClassUID + ".";
        MaskArea mask = getMask(dcmCopy.getString(Tag.StationName));
        // BurnedInAnnotation
        if (isCleanPixelAllowedDependingImageType(dcmCopy, sopClassUID, scuPattern) && evaluateConditionCleanPixelData(dcmCopy)) {
            context.setMaskArea(mask);
            if (mask == null) {
                throw new IllegalStateException("Clean pixel is not applied: mask not defined in station name");
            }
        } else {
            context.setMaskArea(null);
        }
    }
}

Example 2 with MaskArea

use of org.dcm4che3.img.op.MaskArea in project karnak by OsiriX-Foundation.

the class Profile method createProfilesList.

public List<ProfileItem> createProfilesList(final ProfileEntity profileEntity) {
    if (profileEntity != null) {
        List<ProfileItem> profileItems = getProfileItems(profileEntity);
        profileEntity.getMaskEntities().forEach(m -> {
            Color color = null;
            if (StringUtil.hasText(m.getColor())) {
                color = ActionTags.hexadecimal2Color(m.getColor());
            }
            List<Shape> shapeList = m.getRectangles().stream().map(Shape.class::cast).collect(Collectors.toList());
            addMask(m.getStationName(), new MaskArea(shapeList, color));
        });
        return profileItems;
    }
    return Collections.emptyList();
}

Example 3 with MaskArea

use of org.dcm4che3.img.op.MaskArea in project karnak by OsiriX-Foundation.

the class ForwardService method transformImage.

private static Editable<PlanarImage> transformImage(Attributes attributes, AttributeEditorContext context) {
    MaskArea m = context.getMaskArea();
    boolean defacing = LangUtil.getEmptytoFalse(context.getProperties().getProperty(Defacer.APPLY_DEFACING));
    if (m != null || defacing) {
        return img -> {
            PlanarImage image = img;
            if (defacing) {
                image = Defacer.apply(attributes, image);
            }
            if (m != null) {
                image = MaskArea.drawShape(image.toMat(), m);
            }
            return image;
        };
    }
    return null;
}