Examples with ExportContainer org.deeplearning4j.spark.models.sequencevectors.export.ExportContainer used on opensource projects

Example 1 with ExportContainer

use of org.deeplearning4j.spark.models.sequencevectors.export.ExportContainer in project deeplearning4j by deeplearning4j.

the class SparkSequenceVectors method fitSequences.

/**
     * Base training entry point
     *
     * @param corpus
     */
public void fitSequences(JavaRDD<Sequence<T>> corpus) {
    /**
         * Basically all we want for base implementation here is 3 things:
         * a) build vocabulary
         * b) build huffman tree
         * c) do training
         *
         * in this case all classes extending SeqVec, like deepwalk or word2vec will be just building their RDD<Sequence<T>>,
         * and calling this method for training, instead implementing own routines
         */
    validateConfiguration();
    if (ela == null) {
        try {
            ela = (SparkElementsLearningAlgorithm) Class.forName(configuration.getElementsLearningAlgorithm()).newInstance();
        } catch (Exception e) {
            throw new RuntimeException(e);
        }
    }
    if (workers > 1) {
        log.info("Repartitioning corpus to {} parts...", workers);
        corpus.repartition(workers);
    }
    if (storageLevel != null)
        corpus.persist(storageLevel);
    final JavaSparkContext sc = new JavaSparkContext(corpus.context());
    // this will have any effect only if wasn't called before, in extension classes
    broadcastEnvironment(sc);
    Counter<Long> finalCounter;
    long numberOfSequences = 0;
    /**
         * Here we s
         */
    if (paramServerConfiguration == null)
        paramServerConfiguration = VoidConfiguration.builder().faultToleranceStrategy(FaultToleranceStrategy.NONE).numberOfShards(2).unicastPort(40123).multicastPort(40124).build();
    isAutoDiscoveryMode = paramServerConfiguration.getShardAddresses() != null && !paramServerConfiguration.getShardAddresses().isEmpty() ? false : true;
    Broadcast<VoidConfiguration> paramServerConfigurationBroadcast = null;
    if (isAutoDiscoveryMode) {
        log.info("Trying auto discovery mode...");
        elementsFreqAccumExtra = corpus.context().accumulator(new ExtraCounter<Long>(), new ExtraElementsFrequenciesAccumulator());
        ExtraCountFunction<T> elementsCounter = new ExtraCountFunction<>(elementsFreqAccumExtra, configuration.isTrainSequenceVectors());
        JavaRDD<Pair<Sequence<T>, Long>> countedCorpus = corpus.map(elementsCounter);
        // just to trigger map function, since we need huffman tree before proceeding
        numberOfSequences = countedCorpus.count();
        finalCounter = elementsFreqAccumExtra.value();
        ExtraCounter<Long> spareReference = (ExtraCounter<Long>) finalCounter;
        // getting list of available hosts
        Set<NetworkInformation> availableHosts = spareReference.getNetworkInformation();
        log.info("availableHosts: {}", availableHosts);
        if (availableHosts.size() > 1) {
            // now we have to pick N shards and optionally N backup nodes, and pass them within configuration bean
            NetworkOrganizer organizer = new NetworkOrganizer(availableHosts, paramServerConfiguration.getNetworkMask());
            paramServerConfiguration.setShardAddresses(organizer.getSubset(paramServerConfiguration.getNumberOfShards()));
            // backup shards are optional
            if (paramServerConfiguration.getFaultToleranceStrategy() != FaultToleranceStrategy.NONE) {
                paramServerConfiguration.setBackupAddresses(organizer.getSubset(paramServerConfiguration.getNumberOfShards(), paramServerConfiguration.getShardAddresses()));
            }
        } else {
            // for single host (aka driver-only, aka spark-local) just run on loopback interface
            paramServerConfiguration.setShardAddresses(Arrays.asList("127.0.0.1:" + paramServerConfiguration.getUnicastPort()));
            paramServerConfiguration.setFaultToleranceStrategy(FaultToleranceStrategy.NONE);
        }
        log.info("Got Shards so far: {}", paramServerConfiguration.getShardAddresses());
        // update ps configuration with real values where required
        paramServerConfiguration.setNumberOfShards(paramServerConfiguration.getShardAddresses().size());
        paramServerConfiguration.setUseHS(configuration.isUseHierarchicSoftmax());
        paramServerConfiguration.setUseNS(configuration.getNegative() > 0);
        paramServerConfigurationBroadcast = sc.broadcast(paramServerConfiguration);
    } else {
        // update ps configuration with real values where required
        paramServerConfiguration.setNumberOfShards(paramServerConfiguration.getShardAddresses().size());
        paramServerConfiguration.setUseHS(configuration.isUseHierarchicSoftmax());
        paramServerConfiguration.setUseNS(configuration.getNegative() > 0);
        paramServerConfigurationBroadcast = sc.broadcast(paramServerConfiguration);
        // set up freqs accumulator
        elementsFreqAccum = corpus.context().accumulator(new Counter<Long>(), new ElementsFrequenciesAccumulator());
        CountFunction<T> elementsCounter = new CountFunction<>(configurationBroadcast, paramServerConfigurationBroadcast, elementsFreqAccum, configuration.isTrainSequenceVectors());
        // count all sequence elements and their sum
        JavaRDD<Pair<Sequence<T>, Long>> countedCorpus = corpus.map(elementsCounter);
        // just to trigger map function, since we need huffman tree before proceeding
        numberOfSequences = countedCorpus.count();
        // now we grab counter, which contains frequencies for all SequenceElements in corpus
        finalCounter = elementsFreqAccum.value();
    }
    long numberOfElements = (long) finalCounter.totalCount();
    long numberOfUniqueElements = finalCounter.size();
    log.info("Total number of sequences: {}; Total number of elements entries: {}; Total number of unique elements: {}", numberOfSequences, numberOfElements, numberOfUniqueElements);
    /*
         build RDD of reduced SequenceElements, just get rid of labels temporary, stick to some numerical values,
         like index or hashcode. So we could reduce driver memory footprint
         */
    // build huffman tree, and update original RDD with huffman encoding info
    shallowVocabCache = buildShallowVocabCache(finalCounter);
    shallowVocabCacheBroadcast = sc.broadcast(shallowVocabCache);
    // FIXME: probably we need to reconsider this approach
    JavaRDD<T> vocabRDD = corpus.flatMap(new VocabRddFunctionFlat<T>(configurationBroadcast, paramServerConfigurationBroadcast)).distinct();
    vocabRDD.count();
    /**
         * now we initialize Shards with values. That call should be started from driver which is either Client or Shard in standalone mode.
         */
    VoidParameterServer.getInstance().init(paramServerConfiguration, new RoutedTransport(), ela.getTrainingDriver());
    VoidParameterServer.getInstance().initializeSeqVec(configuration.getLayersSize(), (int) numberOfUniqueElements, 119, configuration.getLayersSize() / paramServerConfiguration.getNumberOfShards(), paramServerConfiguration.isUseHS(), paramServerConfiguration.isUseNS());
    // proceed to training
    // also, training function is the place where we invoke ParameterServer
    TrainingFunction<T> trainer = new TrainingFunction<>(shallowVocabCacheBroadcast, configurationBroadcast, paramServerConfigurationBroadcast);
    PartitionTrainingFunction<T> partitionTrainer = new PartitionTrainingFunction<>(shallowVocabCacheBroadcast, configurationBroadcast, paramServerConfigurationBroadcast);
    if (configuration != null)
        for (int e = 0; e < configuration.getEpochs(); e++) corpus.foreachPartition(partitionTrainer);
    //corpus.foreach(trainer);
    // we're transferring vectors to ExportContainer
    JavaRDD<ExportContainer<T>> exportRdd = vocabRDD.map(new DistributedFunction<T>(paramServerConfigurationBroadcast, configurationBroadcast, shallowVocabCacheBroadcast));
    // at this particular moment training should be pretty much done, and we're good to go for export
    if (exporter != null)
        exporter.export(exportRdd);
    // unpersist, if we've persisten corpus after all
    if (storageLevel != null)
        corpus.unpersist();
    log.info("Training finish, starting cleanup...");
    VoidParameterServer.getInstance().shutdown();
}

Example 2 with ExportContainer

use of org.deeplearning4j.spark.models.sequencevectors.export.ExportContainer in project deeplearning4j by deeplearning4j.

the class VocabCacheExporter method export.

@Override
public void export(JavaRDD<ExportContainer<VocabWord>> rdd) {
    // beware, generally that's VERY bad idea, but will work fine for testing purposes
    List<ExportContainer<VocabWord>> list = rdd.collect();
    if (vocabCache == null)
        vocabCache = new AbstractCache<>();
    INDArray syn0 = null;
    // just roll through list
    for (ExportContainer<VocabWord> element : list) {
        VocabWord word = element.getElement();
        INDArray weights = element.getArray();
        if (syn0 == null)
            syn0 = Nd4j.create(list.size(), weights.length());
        vocabCache.addToken(word);
        vocabCache.addWordToIndex(word.getIndex(), word.getLabel());
        syn0.getRow(word.getIndex()).assign(weights);
    }
    if (lookupTable == null)
        lookupTable = new InMemoryLookupTable.Builder<VocabWord>().cache(vocabCache).vectorLength(syn0.columns()).build();
    lookupTable.setSyn0(syn0);
    // this is bad & dirty, but we don't really need anything else for testing :)
    word2Vec = WordVectorSerializer.fromPair(Pair.<InMemoryLookupTable, VocabCache>makePair(lookupTable, vocabCache));
}

Example 3 with ExportContainer

use of org.deeplearning4j.spark.models.sequencevectors.export.ExportContainer in project deeplearning4j by deeplearning4j.

the class DistributedFunction method call.

@Override
public ExportContainer<T> call(T word) throws Exception {
    if (shallowVocabCache == null)
        shallowVocabCache = shallowVocabBroadcast.getValue();
    ExportContainer<T> container = new ExportContainer<>();
    ShallowSequenceElement reduced = shallowVocabCache.tokenFor(word.getStorageId());
    word.setIndex(reduced.getIndex());
    container.setElement(word);
    container.setArray(VoidParameterServer.getInstance().getVector(reduced.getIndex()));
    return container;
}