Examples with MandelbrotModel org.eclipse.scanning.example.detector.MandelbrotModel used on opensource projects

Example 1 with MandelbrotModel

use of org.eclipse.scanning.example.detector.MandelbrotModel in project gda-core by openGDA.

the class ScanRequestConverterTest method testUnknownDetector.

@Test(expected = IllegalArgumentException.class)
public void testUnknownDetector() throws Exception {
    final String detName = "mandelbrot";
    final String displayName = "Mandelbrot Detector";
    final IDetectorModel detModel = new MandelbrotModel();
    detModel.setName(detName);
    mappingBean.setDetectorParameters(Arrays.asList(new DetectorModelWrapper(displayName, detModel, true)));
    // Act - convert mapping bean to scan request
    final ScanRequest scanRequest = scanRequestConverter.convertToScanRequest(mappingBean);
    // Assert
    assertEquals(detModel, scanRequest.getDetectors().get(detName));
    // Act again - convert scan request back to mapping bean, throws exception
    scanRequestConverter.mergeIntoMappingBean(scanRequest, newMappingBean);
}

Example 2 with MandelbrotModel

use of org.eclipse.scanning.example.detector.MandelbrotModel in project gda-core by openGDA.

the class MappingUISerializationTest method testSerializeDetectorModelWrapper.

@Test
public void testSerializeDetectorModelWrapper() throws Exception {
    MandelbrotModel model = createMandelbrotModel();
    DetectorModelWrapper detectorModelWrapper = new DetectorModelWrapper("Mandelbrot Detector", model, true);
    String json = service.marshal(detectorModelWrapper);
    DetectorModelWrapper newDetectorModelWrapper = service.unmarshal(json, DetectorModelWrapper.class);
    assertEquals(detectorModelWrapper, newDetectorModelWrapper);
}

Example 3 with MandelbrotModel

use of org.eclipse.scanning.example.detector.MandelbrotModel in project gda-core by openGDA.

the class MappingUISerializationTest method createMandelbrotModel.

private MandelbrotModel createMandelbrotModel() {
    MandelbrotModel model = new MandelbrotModel();
    model.setName("mandelbrot");
    model.setRealAxisName("xNex");
    model.setImaginaryAxisName("yNex");
    model.setColumns(64);
    model.setRows(64);
    model.setMaxIterations(1);
    model.setExposureTime(0.0);
    return model;
}

Example 4 with MandelbrotModel

use of org.eclipse.scanning.example.detector.MandelbrotModel in project gda-core by openGDA.

the class MappingUISerializationTest method testSerializeMappingExperimentBean.

@Test
public void testSerializeMappingExperimentBean() throws Exception {
    ScriptFiles scriptFiles = new ScriptFiles();
    scriptFiles.setBeforeScanScript("/path/to/before.py");
    scriptFiles.setAfterScanScript("/path/to/after.py");
    Map<String, Object> beamlineConfiguration = new HashMap<>();
    beamlineConfiguration.put("D7A", "Gap");
    beamlineConfiguration.put("D7B", "gap");
    beamlineConfiguration.put("kb_vfm_x", "7.0");
    MandelbrotModel model = createMandelbrotModel();
    DetectorModelWrapper mandelbrotWrapper = new DetectorModelWrapper("Mandelbrot Detector", model, true);
    SimpleSampleMetadata sampleMetadata = new SimpleSampleMetadata();
    sampleMetadata.setSampleName("SampleName");
    sampleMetadata.setDescription("Description of sample");
    IScanDefinition scanDefinition = createScanDefinition();
    MappingExperimentBean mappingBean = new MappingExperimentBean();
    mappingBean.setScriptFiles(scriptFiles);
    mappingBean.setBeamlineConfiguration(beamlineConfiguration);
    mappingBean.setDetectorParameters(Arrays.asList(mandelbrotWrapper));
    mappingBean.setSampleMetadata(sampleMetadata);
    mappingBean.setScanDefinition(scanDefinition);
    ConfigWrapper w = new ConfigWrapper();
    w.setAppName("dawn");
    w.setPathToConfig("/path/to/config.json");
    mappingBean.addProcessingRequest(w);
    String json = service.marshal(mappingBean);
    MappingExperimentBean newMappingBean = service.unmarshal(json, MappingExperimentBean.class);
    assertEquals(mappingBean, newMappingBean);
}

Example 5 with MandelbrotModel

use of org.eclipse.scanning.example.detector.MandelbrotModel in project gda-core by openGDA.

the class ScannableNexusWrapperScanTest method before.

@Before
public void before() throws Exception {
    final MandelbrotModel model = new MandelbrotModel();
    model.setName("mandelbrot");
    model.setRealAxisName(SCANNABLE_NAME_SALONG);
    model.setImaginaryAxisName(SCANNABLE_NAME_SAPERP);
    detector = TestDetectorHelpers.createAndConfigureMandelbrotDetector(model);
    assertThat(detector, is(notNullValue()));
    detector.addRunListener(IRunListener.createRunPerformedListener(event -> System.out.println("Ran mandelbrot detector @ " + event.getPosition())));
    readLegacySpringConfig(TEST_CONFIG_FILE_PATH);
    ServiceHolder.getNexusDataWriterConfiguration().setLocationMap(locationMap);
    ServiceHolder.getNexusDataWriterConfiguration().setMetadataScannables(legacyMetadataScannables);
    final Factory factory = TestHelpers.createTestFactory();
    factory.addFindable(jythonServer);
    factory.addFindable(new SampleAngleScannable(SCANNABLE_NAME_SALONG, false));
    factory.addFindable(new SampleAngleScannable(SCANNABLE_NAME_SAPERP, true));
    factory.addFindable(new DummyScannable("sax", 5.0, "BL00P-MO-SAMPLE-01:SAX"));
    factory.addFindable(new DummyScannable("say", 23.4, "BL00P-MO-SAMPLE-01:SAY"));
    factory.addFindable(new DummyScannable("satilt", 127.4));
    factory.addFindable(new DummyScannable("saazimuth", 24.32));
    factory.addFindable(new DummyScannable("s6_xsize", 2.92));
    factory.addFindable(new DummyScannable("s2_ysize", 8.34));
    factory.addFindable(new DummyScannable("s2_xsize", 1.66));
    factory.addFindable(new DummyScannable("exit_slit", 0.0683, "BL00P-MO-SLIT-01:EXIT"));
    factory.addFindable(new DummyEnergyScannable("pgm_cff", 123.45));
    factory.addFindable(new DummyScannable("energy", 9.357e8));
    factory.addFindable(new DummyScannable("pgm_linedensity", 28));
    factory.addFindable(new DummyScannable("ring_current", 15.2, "SR-DI-DCCT-01:SIGNAL"));
    factory.addFindable(new DummyScannable("ring_energy", 47.53, "CS-CS-MSTAT-01:BEAMENERGY"));
    factory.addFindable(new DummyScannable("lc_pressure", 73.012));
    factory.addFindable(new DummyStringScannable("sample_name", "name", "test sample"));
    final DummyMultiFieldUnitsScannable<Temperature> cryostat = new DummyMultiFieldUnitsScannable<>("cryostat", "K");
    cryostat.setInputNames(new String[] { "temperature_demand" });
    cryostat.setExtraNames(new String[] { "cryostat_temperature", "temperature", "shield_temperature", "heater_percent", "heater_setting" });
    cryostat.setCurrentPosition(20.0);
    cryostat.setExtraFieldsPosition(19.9, 19.9, 26.5, 64.3, 15.3);
    factory.addFindable(cryostat);
    final DummyMultiFieldUnitsScannable<Length> id = new DummyMultiFieldUnitsScannable<>("id");
    id.setScanMetadataAttribute(Scannable.ATTR_NX_CLASS, "NXinsertion_device");
    // no input names
    id.setInputNames(new String[0]);
    id.setExtraNames(new String[] { "gap", "final_polarisation_label", "phase" });
    id.setExtraFieldsPosition(20, "label", 60);
    factory.addFindable(id);
    final DummyMultiFieldUnitsScannable<Angle> sapolar = new DummyMultiFieldUnitsScannable<>("sapolar");
    sapolar.setInputNames(new String[] { "alpha", "delta", "omicron" });
    sapolar.setExtraNames(new String[0]);
    sapolar.setCurrentPosition(0.5, 1.25, -0.75);
    factory.addFindable(sapolar);
    final DummyScannable attr = new DummyScannable("attributes", 2.5);
    attr.setInputNames(new String[] { NXpositioner.NX_VALUE });
    attr.setScanMetadataAttribute("stringAttr", "foo");
    attr.setScanMetadataAttribute("doubleAttr", 123.456);
    factory.addFindable(attr);
    final DummyScannable beam = new DummyScannable("beam", 3.25);
    beam.setInputNames(new String[] { "extent" });
    beam.setScanMetadataAttribute(Scannable.ATTR_NX_CLASS, "NXbeam");
    beam.setScanMetadataAttribute(Scannable.ATTR_NEXUS_CATEGORY, "NXsample");
    factory.addFindable(beam);
    Finder.addFactory(factory);
}