Examples with AttestationAccess org.ehrbase.dao.access.jooq.AttestationAccess used on opensource projects

Example 1 with AttestationAccess

use of org.ehrbase.dao.access.jooq.AttestationAccess in project ehrbase by ehrbase.

the class CompositionServiceImp method getOriginalVersionComposition.

@Override
public Optional<OriginalVersion<Composition>> getOriginalVersionComposition(UUID versionedObjectUid, int version) {
    // check for valid version parameter
    if ((version == 0) || I_CompositionAccess.getLastVersionNumber(getDataAccess(), versionedObjectUid) < version) {
        throw new ObjectNotFoundException("versioned_composition", "No VERSIONED_COMPOSITION with given version: " + version);
    }
    // retrieve requested object
    I_CompositionAccess compositionAccess = I_CompositionAccess.retrieveCompositionVersion(getDataAccess(), versionedObjectUid, version);
    if (compositionAccess == null) {
        return Optional.empty();
    }
    // create data for output, i.e. fields of the OriginalVersion<Composition>
    ObjectVersionId versionId = new ObjectVersionId(versionedObjectUid + "::" + getServerConfig().getNodename() + "::" + version);
    DvCodedText lifecycleState = new DvCodedText("complete", new CodePhrase(// TODO: once lifecycle state is supported, get it here dynamically
    "532"));
    AuditDetails commitAudit = compositionAccess.getAuditDetailsAccess().getAsAuditDetails();
    ObjectRef<HierObjectId> contribution = new ObjectRef<>(new HierObjectId(compositionAccess.getContributionId().toString()), "openehr", "contribution");
    List<UUID> attestationIdList = I_AttestationAccess.retrieveListOfAttestationsByRef(getDataAccess(), compositionAccess.getAttestationRef());
    List<Attestation> attestations = // as default, gets content if available in the following lines
    null;
    if (!attestationIdList.isEmpty()) {
        attestations = new ArrayList<>();
        for (UUID id : attestationIdList) {
            I_AttestationAccess a = new AttestationAccess(getDataAccess()).retrieveInstance(id);
            attestations.add(a.getAsAttestation());
        }
    }
    ObjectVersionId precedingVersionId = null;
    // check if there is a preceding version and set it, if available
    if (version > 1) {
        // in the current scope version is an int and therefore: preceding = current - 1
        precedingVersionId = new ObjectVersionId(versionedObjectUid + "::" + getServerConfig().getNodename() + "::" + (version - 1));
    }
    Optional<CompositionDto> compositionDto = retrieve(versionedObjectUid, version);
    Composition composition = null;
    if (compositionDto.isPresent()) {
        composition = compositionDto.get().getComposition();
    }
    OriginalVersion<Composition> versionComposition = new OriginalVersion<>(versionId, precedingVersionId, composition, lifecycleState, commitAudit, contribution, null, null, attestations);
    return Optional.of(versionComposition);
}

Example 2 with AttestationAccess

use of org.ehrbase.dao.access.jooq.AttestationAccess in project ehrbase by ehrbase.

the class EhrServiceImp method getEhrStatusAtVersion.

@Override
public Optional<OriginalVersion<EhrStatus>> getEhrStatusAtVersion(UUID ehrUuid, UUID versionedObjectUid, int version) {
    // pre-step: check for valid ehrId
    if (!hasEhr(ehrUuid)) {
        throw new ObjectNotFoundException("ehr", "No EHR found with given ID: " + ehrUuid.toString());
    }
    if ((version == 0) || (I_StatusAccess.getLatestVersionNumber(getDataAccess(), versionedObjectUid) < version)) {
        throw new ObjectNotFoundException("versioned_ehr_status", "No VERSIONED_EHR_STATUS with given version: " + version);
    }
    I_StatusAccess statusAccess = I_StatusAccess.getVersionMapOfStatus(getDataAccess(), versionedObjectUid).get(version);
    ObjectVersionId versionId = new ObjectVersionId(versionedObjectUid + "::" + getServerConfig().getNodename() + "::" + version);
    // TODO: once lifecycle state is supported, get it here dynamically
    DvCodedText lifecycleState = new DvCodedText("complete", new CodePhrase("532"));
    AuditDetails commitAudit = statusAccess.getAuditDetailsAccess().getAsAuditDetails();
    ObjectRef<HierObjectId> contribution = new ObjectRef<>(new HierObjectId(statusAccess.getStatusRecord().getInContribution().toString()), "openehr", "contribution");
    List<UUID> attestationIdList = I_AttestationAccess.retrieveListOfAttestationsByRef(getDataAccess(), statusAccess.getStatusRecord().getAttestationRef());
    // as default, gets content if available in the following lines
    List<Attestation> attestations = null;
    if (!attestationIdList.isEmpty()) {
        attestations = new ArrayList<>();
        for (UUID id : attestationIdList) {
            I_AttestationAccess a = new AttestationAccess(getDataAccess()).retrieveInstance(id);
            attestations.add(a.getAsAttestation());
        }
    }
    ObjectVersionId precedingVersionId = null;
    // check if there is a preceding version and set it, if available
    if (version > 1) {
        // in the current scope version is an int and therefore: preceding = current - 1
        precedingVersionId = new ObjectVersionId(versionedObjectUid + "::" + getServerConfig().getNodename() + "::" + (version - 1));
    }
    OriginalVersion<EhrStatus> versionStatus = new OriginalVersion<>(versionId, precedingVersionId, statusAccess.getStatus(), lifecycleState, commitAudit, contribution, null, null, attestations);
    return Optional.of(versionStatus);
}