Examples with BaseDatasetImporter org.eol.globi.data.BaseDatasetImporter used on opensource projects

Example 1 with BaseDatasetImporter

use of org.eol.globi.data.BaseDatasetImporter in project eol-globi-data by jhpoelen.

the class DatasetImporterFactoryImplIT method createHurlbert.

@Test
public void createHurlbert() throws StudyImporterException, DatasetRegistryException {
    final DatasetRegistryGitHubRemote datasetFinderGitHubRemote = new DatasetRegistryGitHubRemote(inStream -> inStream);
    DatasetImporter importer = importerFor(datasetFinderGitHubRemote, "hurlbertlab/dietdatabase");
    assertThat(importer, is(notNullValue()));
    assertThat(importer, is(instanceOf(DatasetImporterForHurlbert.class)));
    final JsonNode config = ((BaseDatasetImporter) importer).getDataset().getConfig();
    assertThat(config, is(notNullValue()));
}

Example 2 with BaseDatasetImporter

use of org.eol.globi.data.BaseDatasetImporter in project eol-globi-data by jhpoelen.

the class DatasetImporterFactoryImplIT method createSIAD.

@Test
public void createSIAD() throws StudyImporterException, DatasetRegistryException {
    final DatasetRegistryGitHubRemote datasetFinderGitHubRemote = new DatasetRegistryGitHubRemote(inStream -> inStream);
    DatasetImporter importer = importerFor(datasetFinderGitHubRemote, "globalbioticinteractions/siad");
    assertThat(importer, is(notNullValue()));
    Dataset dataset = ((BaseDatasetImporter) importer).getDataset();
    final JsonNode config = dataset.getConfig();
    assertThat(config, is(notNullValue()));
    assertThat(dataset.getOrDefault(DatasetConstant.SHOULD_RESOLVE_REFERENCES, "donald"), is("false"));
}