Examples with InteractionListener org.eol.globi.process.InteractionListener used on opensource projects

Example 51 with InteractionListener

use of org.eol.globi.process.InteractionListener in project eol-globi-data by jhpoelen.

the class InteractionListenerIndexingTest method indexOnSourceOccurrenceIdTargetOccurrenceIdPairs.

@Test
public void indexOnSourceOccurrenceIdTargetOccurrenceIdPairs() throws StudyImporterException {
    TreeMap<Pair<String, String>, Map<String, String>> interactionsWithUnresolvedOccurrenceIds = new TreeMap<>();
    interactionsWithUnresolvedOccurrenceIds.put(Pair.of(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID, "source123"), Collections.emptyMap());
    InteractionListener listener = new InteractionListenerIndexing(interactionsWithUnresolvedOccurrenceIds);
    listener.on(new TreeMap<String, String>() {

        {
            put(DatasetImporterForTSV.TARGET_OCCURRENCE_ID, "target123");
            put(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID, "source123");
            put(TaxonUtil.SOURCE_TAXON_NAME, "sourceName123");
        }
    });
    assertThat(interactionsWithUnresolvedOccurrenceIds.size(), Is.is(1));
    Map<String, String> props = interactionsWithUnresolvedOccurrenceIds.get(Pair.of(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID, "source123"));
    assertThat(props.get(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID), Is.is("source123"));
    assertThat(props.get(TaxonUtil.SOURCE_TAXON_NAME), Is.is("sourceName123"));
}

Example 52 with InteractionListener

use of org.eol.globi.process.InteractionListener in project eol-globi-data by jhpoelen.

the class InteractionListenerIndexingTest method indexOnSourceOcccurenceIdTargetCatalogNumberIdPairs.

@Test
public void indexOnSourceOcccurenceIdTargetCatalogNumberIdPairs() throws StudyImporterException {
    TreeMap<Pair<String, String>, Map<String, String>> interactionsWithUnresolvedOccurrenceIds = new TreeMap<>();
    String targetOccurrenceId = "United States National Parasite Collection 81321";
    interactionsWithUnresolvedOccurrenceIds.put(Pair.of(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID, targetOccurrenceId), Collections.emptyMap());
    InteractionListener listener = new InteractionListenerIndexing(interactionsWithUnresolvedOccurrenceIds);
    listener.on(new TreeMap<String, String>() {

        {
            put(DatasetImporterForTSV.TARGET_OCCURRENCE_ID, "http://n2t.net/ark:/65665/3326e7c2d-d8fa-4e5d-b01f-20d6f4150356");
            put(DatasetImporterForTSV.TARGET_CATALOG_NUMBER, "USNPC # 081321");
            put(TaxonUtil.TARGET_TAXON_NAME, "sourceName123");
        }
    });
    assertThat(interactionsWithUnresolvedOccurrenceIds.size(), Is.is(1));
    Map<String, String> props = interactionsWithUnresolvedOccurrenceIds.get(Pair.of(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID, targetOccurrenceId));
    assertNotNull(props);
    assertThat(props.get(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID), Is.is("http://n2t.net/ark:/65665/3326e7c2d-d8fa-4e5d-b01f-20d6f4150356"));
    assertThat(props.get(DatasetImporterForTSV.SOURCE_CATALOG_NUMBER), Is.is("USNPC # 081321"));
    assertThat(props.get(TaxonUtil.SOURCE_TAXON_NAME), Is.is("sourceName123"));
}

Example 53 with InteractionListener

use of org.eol.globi.process.InteractionListener in project eol-globi-data by jhpoelen.

the class InteractionListenerIndexingTest method indexOnSourceOccurrenceIdTargetOccurrenceIdPairs3.

@Test
public void indexOnSourceOccurrenceIdTargetOccurrenceIdPairs3() throws StudyImporterException {
    TreeMap<Pair<String, String>, Map<String, String>> interactionsWithUnresolvedOccurrenceIds = new TreeMap<>();
    interactionsWithUnresolvedOccurrenceIds.put(Pair.of(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID, "occurrence123"), Collections.emptyMap());
    InteractionListener listener = new InteractionListenerIndexing(interactionsWithUnresolvedOccurrenceIds);
    listener.on(new TreeMap<String, String>() {

        {
            put(DatasetImporterForTSV.TARGET_OCCURRENCE_ID, "occurrence123");
            put(TaxonUtil.TARGET_TAXON_NAME, "occurrenceName123");
            put(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID, "occurrence456");
        }
    });
    assertThat(interactionsWithUnresolvedOccurrenceIds.size(), Is.is(1));
    Map<String, String> props = interactionsWithUnresolvedOccurrenceIds.get(Pair.of(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID, "occurrence123"));
    assertThat(props.get(TaxonUtil.SOURCE_TAXON_NAME), Is.is("occurrenceName123"));
    assertThat(props.get(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID), Is.is("occurrence123"));
}

Example 54 with InteractionListener

use of org.eol.globi.process.InteractionListener in project eol-globi-data by jhpoelen.

the class InteractionListenerIndexingTest method indexOnSourceOccurrenceIdTargetOccurrenceIdPairs2.

@Test
public void indexOnSourceOccurrenceIdTargetOccurrenceIdPairs2() throws StudyImporterException {
    TreeMap<Pair<String, String>, Map<String, String>> interactionsWithUnresolvedOccurrenceIds = new TreeMap<>();
    interactionsWithUnresolvedOccurrenceIds.put(Pair.of(DatasetImporterForTSV.TARGET_OCCURRENCE_ID, "target123"), Collections.emptyMap());
    InteractionListener listener = new InteractionListenerIndexing(interactionsWithUnresolvedOccurrenceIds);
    listener.on(new TreeMap<String, String>() {

        {
            put(DatasetImporterForTSV.TARGET_OCCURRENCE_ID, "target123");
            put(TaxonUtil.TARGET_TAXON_NAME, "targetName123");
        }
    });
    assertThat(interactionsWithUnresolvedOccurrenceIds.size(), Is.is(1));
    Map<String, String> props = interactionsWithUnresolvedOccurrenceIds.get(Pair.of(DatasetImporterForTSV.TARGET_OCCURRENCE_ID, "target123"));
    assertThat(props.get(DatasetImporterForTSV.TARGET_OCCURRENCE_ID), Is.is("target123"));
    assertThat(props.get(TaxonUtil.TARGET_TAXON_NAME), Is.is("targetName123"));
}

Example 55 with InteractionListener

use of org.eol.globi.process.InteractionListener in project eol-globi-data by jhpoelen.

the class InteractionListenerIndexingTest method indexOnTargetOcccurenceIdSourceCatalogNumberIdPairs.

@Test
public void indexOnTargetOcccurenceIdSourceCatalogNumberIdPairs() throws StudyImporterException {
    TreeMap<Pair<String, String>, Map<String, String>> interactionsWithUnresolvedOccurrenceIds = new TreeMap<>();
    String targetOccurrenceId = "United States National Parasite Collection 81321";
    interactionsWithUnresolvedOccurrenceIds.put(Pair.of(DatasetImporterForTSV.TARGET_OCCURRENCE_ID, targetOccurrenceId), Collections.emptyMap());
    InteractionListener listener = new InteractionListenerIndexing(interactionsWithUnresolvedOccurrenceIds);
    listener.on(new TreeMap<String, String>() {

        {
            put(DatasetImporterForTSV.SOURCE_OCCURRENCE_ID, "http://n2t.net/ark:/65665/3326e7c2d-d8fa-4e5d-b01f-20d6f4150356");
            put(DatasetImporterForTSV.SOURCE_CATALOG_NUMBER, "USNPC # 081321");
            put(TaxonUtil.SOURCE_TAXON_NAME, "sourceName123");
        }
    });
    assertThat(interactionsWithUnresolvedOccurrenceIds.size(), Is.is(1));
    Map<String, String> props = interactionsWithUnresolvedOccurrenceIds.get(Pair.of(DatasetImporterForTSV.TARGET_OCCURRENCE_ID, targetOccurrenceId));
    assertNotNull(props);
    assertThat(props.get(DatasetImporterForTSV.TARGET_OCCURRENCE_ID), Is.is("http://n2t.net/ark:/65665/3326e7c2d-d8fa-4e5d-b01f-20d6f4150356"));
    assertThat(props.get(DatasetImporterForTSV.TARGET_CATALOG_NUMBER), Is.is("USNPC # 081321"));
    assertThat(props.get(TaxonUtil.TARGET_TAXON_NAME), Is.is("sourceName123"));
}