Examples with DOIResolverImpl org.eol.globi.service.DOIResolverImpl used on opensource projects

Example 1 with DOIResolverImpl

use of org.eol.globi.service.DOIResolverImpl in project eol-globi-data by jhpoelen.

the class Normalizer method importData.

void importData(GraphDatabaseService graphService, String cacheDir) {
    NodeFactoryNeo4j factory = new NodeFactoryNeo4j(graphService);
    factory.setEcoregionFinder(getEcoregionFinder());
    factory.setDoiResolver(new DOIResolverImpl());
    try {
        CacheFactory cacheFactory = dataset -> new CacheLocalReadonly(dataset.getNamespace(), cacheDir);
        DatasetFinder finder = new DatasetFinderLocal(cacheDir, cacheFactory);
        StudyImporter importer = new StudyImporterForGitHubData(new ParserFactoryLocal(), factory, finder);
        importer.setDataset(new DatasetLocal());
        importer.setLogger(new StudyImportLogger());
        importer.importStudy();
    } catch (StudyImporterException e) {
        LOG.error("problem encountered while importing [" + StudyImporterForGitHubData.class.getName() + "]", e);
    }
    EcoregionFinder regionFinder = getEcoregionFinder();
    if (regionFinder != null) {
        regionFinder.shutdown();
    }
}

Example 2 with DOIResolverImpl

use of org.eol.globi.service.DOIResolverImpl in project eol-globi-data by jhpoelen.

the class NodeFactoryIT method createStudyWithDOIResolving.

@Test
public void createStudyWithDOIResolving() throws NodeFactoryException {
    NodeFactoryNeo4j fullNodeFactory = new NodeFactoryNeo4j(getGraphDb());
    fullNodeFactory.setDoiResolver(new DOIResolverImpl());
    Study study = fullNodeFactory.getOrCreateStudy(new StudyImpl("bla", "source", "doi:10.1073/pnas.1216534110", ""));
    assertThat(study.getCitation(), is("DePalma RA, Burnham DA, Martin LD, Rothschild BM, Larson PL. Physical evidence of predatory behavior in Tyrannosaurus rex. Proceedings of the National Academy of Sciences [Internet]. 2013 July 15;110(31):12560–12564. Available from: http://dx.doi.org/10.1073/pnas.1216534110"));
    assertThat(study.getDOI(), is("doi:10.1073/pnas.1216534110"));
}