use of org.geotoolkit.data.shapefile.lock.AccessManager in project geotoolkit by Geomatys.
the class ShapefileFeatureStore method createFeatureType.
// //////////////////////////////////////////////////////////////////////////
// schema manipulation /////////////////////////////////////////////////////
// //////////////////////////////////////////////////////////////////////////
/**
* Set the FeatureType of this DataStore. This method will delete any
* existing local resources or throw an IOException if the featurestore is
* remote.
*
* @param featureType The desired FeatureType.
* @throws DataStoreException If the featurestore is remote.
*
* @todo must synchronize this properly
*/
@Override
public void createFeatureType(final FeatureType featureType) throws DataStoreException {
final GenericName typeName = featureType.getName();
if (!isWritable(typeName.toString())) {
throw new DataStoreException("Read-only acces prevent type creation.");
}
if (typeName == null) {
throw new DataStoreException("Type name can not be null.");
}
if (!featureType.isSimple()) {
throw new DataStoreException("Feature type must not be null and must be a simple feature type.");
}
if (!featureType.getName().equals(typeName)) {
throw new DataStoreException("Shapefile featurestore can only hold typename same as feature type name.");
}
try {
// delete the files
shpFiles.delete();
} catch (IOException ex) {
throw new DataStoreException("Cannot reset datastore content", ex);
}
final AccessManager locker = shpFiles.createLocker();
// update schema and name
name = typeName;
schema = featureType;
AttributeType desc;
try {
desc = Features.toAttribute(FeatureExt.getDefaultGeometry(featureType)).orElse(null);
} catch (PropertyNotFoundException e) {
getLogger().log(Level.FINE, e, () -> String.format("No geometry can be found in given datatype%n%s", featureType));
desc = null;
}
CoordinateReferenceSystem crs = null;
final Class<?> geomType;
final ShapeType shapeType;
if (desc != null) {
crs = FeatureExt.getCRS(desc);
geomType = desc.getValueClass();
shapeType = ShapeType.findBestGeometryType(geomType);
} else {
geomType = null;
shapeType = ShapeType.NULL;
}
if (shapeType == ShapeType.UNDEFINED) {
throw new DataStoreException("Cannot create a shapefile whose geometry type is " + geomType);
}
try (Closeable disposeLocker = locker::disposeReaderAndWriters) {
final StorageFile shpStoragefile = locker.getStorageFile(SHP);
final StorageFile shxStoragefile = locker.getStorageFile(SHX);
final StorageFile dbfStoragefile = locker.getStorageFile(DBF);
final StorageFile prjStoragefile = locker.getStorageFile(PRJ);
final StorageFile cpgStoragefile = locker.getStorageFile(CPG);
try (FileChannel shpChannel = shpStoragefile.getWriteChannel();
FileChannel shxChannel = shxStoragefile.getWriteChannel()) {
try (ShapefileWriter writer = new ShapefileWriter(shpChannel, shxChannel)) {
// try to get the domain first
final Envelope domain = CRS.getDomainOfValidity(crs);
if (domain != null) {
writer.writeHeaders(new JTSEnvelope2D(domain), shapeType, 0, 100);
} else {
// try to reproject the single overall envelope keeping poles out of the way
final JTSEnvelope2D env = new JTSEnvelope2D(-179, 179, -89, 89, CommonCRS.WGS84.normalizedGeographic());
JTSEnvelope2D transformedBounds;
if (crs != null) {
try {
transformedBounds = env.transform(crs);
} catch (Exception t) {
getLogger().log(Level.WARNING, t.getLocalizedMessage(), t);
// It can happen for local projections :
transformedBounds = new JTSEnvelope2D(crs);
}
} else {
transformedBounds = env;
}
writer.writeHeaders(transformedBounds, shapeType, 0, 100);
}
}
}
final DbaseFileHeader dbfheader = DbaseFileHeader.createDbaseHeader(schema);
dbfheader.setNumRecords(0);
try (WritableByteChannel dbfChannel = dbfStoragefile.getWriteChannel()) {
dbfheader.writeHeader(dbfChannel);
}
if (crs != null) {
// .prj files should have no carriage returns in them, this messes up
// ESRI's ArcXXX software, so we'll be compatible
final WKTFormat format = new WKTFormat(Locale.ENGLISH, null);
format.setConvention(Convention.WKT1_COMMON_UNITS);
format.setNameAuthority(Citations.ESRI);
format.setIndentation(WKTFormat.SINGLE_LINE);
final String s = format.format(crs);
IOUtilities.writeString(s, prjStoragefile.getFile(), Charset.forName("ISO-8859-1"));
} else {
getLogger().warning("PRJ file not generated for null CoordinateReferenceSystem");
Path prjFile = prjStoragefile.getFile();
Files.deleteIfExists(prjFile);
}
// write dbf encoding .cpg
CpgFiles.write(dbfCharset, cpgStoragefile.getFile());
} catch (IOException ex) {
throw new DataStoreException(ex);
}
// Once all writings have succeeded, we can commit them
try {
locker.replaceStorageFiles();
} catch (IOException e) {
throw new DataStoreException("Failed commiting file changes", e);
}
// force reading it again since the file type may be a little different
name = null;
schema = null;
// we still preserve the original type name and attribute classes which may be more restricted
final FeatureTypeBuilder ftb = new FeatureTypeBuilder(getFeatureType());
ftb.setName(typeName);
final AttributeTypeBuilder gtb = (AttributeTypeBuilder) ftb.getProperty("the_geom");
if (Geometry.class.equals(gtb.getValueClass())) {
gtb.setValueClass(shapeType.bestJTSClass());
}
gtb.setName(desc.getName());
for (PropertyType pt : featureType.getProperties(true)) {
if (pt instanceof AttributeType) {
final AttributeType at = (AttributeType) pt;
if (!Geometry.class.isAssignableFrom(at.getValueClass())) {
try {
((AttributeTypeBuilder) ftb.getProperty(at.getName().toString())).setValueClass(at.getValueClass()).setName(at.getName());
} catch (PropertyNotFoundException ex) {
}
}
}
}
schema = ftb.build();
name = schema.getName();
}
use of org.geotoolkit.data.shapefile.lock.AccessManager in project geotoolkit by Geomatys.
the class IndexedShapefileFeatureStore method getBBoxAttributesReader.
protected IndexedShapefileAttributeReader getBBoxAttributesReader(final List<AttributeType> properties, final Envelope bbox, final boolean loose, final Hints hints, final boolean read3D, final double[] res) throws DataStoreException {
final AccessManager locker = shpFiles.createLocker();
final double[] minRes = (double[]) hints.get(Hints.KEY_IGNORE_SMALL_FEATURES);
CloseableCollection<ShpData> goodCollec = null;
try {
final QuadTree quadTree = openQuadTree();
if (quadTree != null) {
final ShxReader shx;
try {
shx = locker.getSHXReader(useMemoryMappedBuffer);
} catch (IOException ex) {
throw new DataStoreException("Error opening Shx file: " + ex.getMessage(), ex);
}
final DataReader<ShpData> dr = new IndexDataReader(shx);
goodCollec = quadTree.search(dr, bbox, minRes);
}
} catch (Exception e) {
throw new DataStoreException("Error querying index: " + e.getMessage());
}
final LazySearchCollection<ShpData> col = (LazySearchCollection) goodCollec;
final LazyTyleSearchIterator.Buffered<ShpData> ite = (col != null) ? col.bboxIterator() : null;
// check if we need to open the dbf reader, no need when only geometry
final boolean readDBF = !(properties.size() == 1 && Geometry.class.isAssignableFrom(properties.get(0).getValueClass()));
final AttributeType[] atts = properties.toArray(new AttributeType[properties.size()]);
try {
return new IndexedBBoxShapefileAttributeReader(locker, atts, read3D, useMemoryMappedBuffer, res, readDBF, dbfCharset, minRes, col, ite, bbox, loose, minRes);
} catch (IOException ex) {
throw new DataStoreException(ex);
}
}
use of org.geotoolkit.data.shapefile.lock.AccessManager in project geotoolkit by Geomatys.
the class IndexedShapefileFeatureStore method getEnvelope.
@Override
public org.opengis.geometry.Envelope getEnvelope(final Query query) throws DataStoreException {
if (!(query instanceof org.geotoolkit.storage.feature.query.Query))
throw new UnsupportedQueryException();
final org.geotoolkit.storage.feature.query.Query gquery = (org.geotoolkit.storage.feature.query.Query) query;
final Filter filter = gquery.getSelection();
if (filter == Filter.include() || QueryUtilities.queryAll(gquery)) {
// use the generic envelope calculation
return super.getEnvelope(gquery);
}
final Set<String> fids = new TreeSet<>();
IdCollectorFilterVisitor.ID_COLLECTOR.visit(filter, fids);
final Set records = new HashSet();
if (!fids.isEmpty()) {
Collection<ShpData> recordsFound = null;
try {
recordsFound = queryFidIndex(fids);
} catch (IOException ex) {
throw new DataStoreException(ex);
}
if (recordsFound != null) {
records.addAll(recordsFound);
}
}
if (records.isEmpty())
return null;
final AccessManager locker = shpFiles.createLocker();
ShapefileReader reader = null;
try {
reader = locker.getSHPReader(false, false, false, null);
final JTSEnvelope2D ret = new JTSEnvelope2D(FeatureExt.getCRS(getFeatureType(getNames().iterator().next().toString())));
for (final Iterator iter = records.iterator(); iter.hasNext(); ) {
final Data data = (Data) iter.next();
reader.goTo(((Long) data.getValue(1)).intValue());
final Record record = reader.nextRecord();
ret.expandToInclude(record.minX, record.minY);
ret.expandToInclude(record.maxX, record.maxY);
}
return ret;
} catch (IOException ex) {
throw new DataStoreException(ex);
} finally {
// todo replace by ARM in JDK 1.7
if (reader != null) {
try {
reader.close();
} catch (IOException ex) {
throw new DataStoreException(ex);
}
}
}
}
use of org.geotoolkit.data.shapefile.lock.AccessManager in project geotoolkit by Geomatys.
the class ShapeFileIndexer method index.
/**
* Index the shapefile denoted by setShapeFileName(String fileName) If when
* a thread starts, another thread is indexing the same file, this thread
* will wait that the first thread ends indexing; in this case <b>zero</b>
* is reurned as result of the indexing process.
*
* @param verbose
* enable/disable printing of dots every 500 indexed records
* @param listener
* DOCUMENT ME!
*
* @return The number of indexed records (or zero)
*
* @throws MalformedURLException
* @throws IOException
* @throws TreeException
* @throws StoreException
* DOCUMENT ME!
* @throws LockTimeoutException
*/
public int index(final boolean verbose, final ProgressController listener) throws MalformedURLException, IOException, TreeException, StoreException {
if (this.shpFiles == null) {
throw new IOException("You have to set a shape file name!");
}
int cnt = 0;
final AccessManager locker = shpFiles.createLocker();
try (Closeable disposeLocker = locker::disposeReaderAndWriters) {
// Temporary file for building...
final StorageFile storage = locker.getStorageFile(this.idxType.shpFileType);
final Path treeFile = storage.getFile();
try (ShapefileReader reader = locker.getSHPReader(true, false, false, null)) {
switch(idxType) {
case QIX:
cnt = this.buildQuadTree(locker, reader, treeFile, verbose);
break;
default:
throw new IllegalArgumentException("NONE is not a legal index choice");
}
} catch (DataStoreException ex) {
if (ex.getCause() instanceof IOException)
throw (IOException) ex.getCause();
else
throw new IOException(ex);
}
}
locker.replaceStorageFiles();
return cnt;
}
use of org.geotoolkit.data.shapefile.lock.AccessManager in project geotoolkit by Geomatys.
the class DbaseFileTest method testRowVsEntry.
@Test
public void testRowVsEntry() throws Exception {
Object[] attrs = new Object[dbf.getHeader().getNumFields()];
final AccessManager locker = shpFiles.createLocker();
DbaseFileReader dbf2 = locker.getDBFReader(false, ShapefileFeatureStore.DEFAULT_STRING_CHARSET);
while (dbf.hasNext()) {
final DbaseFileReader.Row r1 = dbf.next();
final DbaseFileReader.Row r2 = dbf2.next();
r1.readAll(attrs);
for (int i = 0, ii = attrs.length; i < ii; i++) {
assertNotNull(attrs[i]);
assertNotNull(r2.read(i));
assertEquals(attrs[i], r2.read(i));
}
}
dbf2.close();
}
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