Examples with WrapperSoftwareDescription org.gridlab.gat.resources.WrapperSoftwareDescription used on opensource projects

Example 1 with WrapperSoftwareDescription

use of org.gridlab.gat.resources.WrapperSoftwareDescription in project compss by bsc-wdc.

the class ResourceBrokerWrapperJobExample method start.

public void start() throws Exception {
    // First we create a wrapper software description. It describes the
    // executable that's used for the wrapper. We only need to specify the
    // executable, and possibly the stdout and stderr location. The other
    // values (arguments, environment variables, etc.) are automatically
    // filled in by JavaGAT. If there's already a compatible JavaGAT
    // installation on the remote machine, we can use that installation
    // instead of pre staging JavaGAT from the submission machine.
    WrapperSoftwareDescription wsd = new WrapperSoftwareDescription();
    wsd.setStdout(GAT.createFile("wrapper.stdout"));
    wsd.setStderr(GAT.createFile("wrapper.stderr"));
    wsd.setExecutable("/usr/local/package/jdk1.6.0/bin/java");
    wsd.setGATLocation(System.getenv("user.home") + "/JavaGatVersions/JavaGAT-2.0-rc2");
    // Now we create a job description out of the software description.
    WrapperJobDescription wjd = new WrapperJobDescription(wsd);
    // Now we're going to construct 30 wrapped jobs. We add these wrapped
    // jobs to the wrapper job.
    JobDescription[] wrappedJobDescriptions = new JobDescription[30];
    for (int i = 0; i < wrappedJobDescriptions.length; i++) {
        SoftwareDescription sd = new SoftwareDescription();
        sd.setExecutable("/bin/sleep");
        sd.setArguments("" + (int) (30 * Math.random()));
        sd.addPreStagedFile(GAT.createFile("largefile"));
        sd.setStdout(GAT.createFile("stdout." + i));
        Preferences preferences = new Preferences();
        preferences.put("resourcebroker.adaptor.name", "local");
        wrappedJobDescriptions[i] = new JobDescription(sd);
        wjd.add(wrappedJobDescriptions[i], new URI("any://localhost"), preferences);
    }
    // All the wrapped job descriptions are added to the wrapper job
    // description. We're now ready to submit the wrapper job. We create a
    // resource broker, using certain preferences, in order to do this.
    Preferences wrapperPreferences = new Preferences();
    wrapperPreferences.put("resourcebroker.adaptor.name", "globus");
    ResourceBroker broker = GAT.createResourceBroker(wrapperPreferences, new URI("any://fs0.das3.cs.vu.nl/jobmanager-sge"));
    // now we're going to submit this wrapper job description 10 times,
    // which will result in 10 wrapper jobs each holding 30 wrapped jobs. We
    // store the wrapper jobs in an array.
    WrapperJob[] wrapperJobs = new WrapperJob[10];
    for (int i = 0; i < wrapperJobs.length; i++) {
        wrapperJobs[i] = (WrapperJob) broker.submitJob(wjd);
    }
    // All the wrapper jobs are submitted. Let's see what happens. We wait
    // until all wrapper jobs are in the state stopped. And in the meantime
    // we print each second the state of the wrapper job and the state of
    // all of its wrapped jobs. (the first entry of a column is the state of
    // the wrapper job, the other entries are states of the wrapped jobs).
    boolean allwrappersstopped = false;
    while (!allwrappersstopped) {
        allwrappersstopped = true;
        for (int i = 0; i < wrapperJobs.length; i++) {
            System.out.print(wrapperJobs[i].getState().toString().substring(0, 5) + "\t");
            allwrappersstopped = allwrappersstopped & wrapperJobs[i].getState() == JobState.STOPPED;
        }
        System.out.println();
        System.out.println("-----");
        for (int j = 0; j < wrappedJobDescriptions.length; j++) {
            for (int i = 0; i < wrapperJobs.length; i++) {
                System.out.print(wrapperJobs[i].getJob(wrappedJobDescriptions[j]).getState().toString().substring(0, 5) + "\t");
            }
            System.out.println();
        }
        System.out.println();
        Thread.sleep(1000);
    }
    GAT.end();
}