Examples with ImportOptions org.hisp.dhis.dxf2.common.ImportOptions used on opensource projects

Example 31 with ImportOptions

use of org.hisp.dhis.dxf2.common.ImportOptions in project dhis2-core by dhis2.

the class AdxPipedImporter method call.

@Override
public ImportSummary call() {
    ImportSummary result = null;
    SecurityContextHolder.getContext().setAuthentication(authentication);
    DbmsUtils.bindSessionToThread(sessionFactory);
    try {
        result = dataValueSetService.saveDataValueSet(pipeIn, importOptions, id);
    } catch (Exception ex) {
        result = new ImportSummary();
        result.setStatus(ImportStatus.ERROR);
        result.setDescription("Exception: " + ex.getMessage());
    } finally {
        IOUtils.closeQuietly(pipeIn);
        DbmsUtils.unbindSessionFromThread(sessionFactory);
    }
    return result;
}

Example 32 with ImportOptions

use of org.hisp.dhis.dxf2.common.ImportOptions in project dhis2-core by dhis2.

the class DefaultAdxDataService method saveDataValueSetInternal.

private ImportSummary saveDataValueSetInternal(InputStream in, ImportOptions importOptions, TaskId id) {
    notifier.clear(id).notify(id, "ADX parsing process started");
    ImportOptions adxImportOptions = ObjectUtils.firstNonNull(importOptions, ImportOptions.getDefaultImportOptions()).instance().setNotificationLevel(NotificationLevel.OFF);
    // Get import options
    IdScheme dataSetIdScheme = importOptions.getIdSchemes().getDataSetIdScheme();
    IdScheme dataElementIdScheme = importOptions.getIdSchemes().getDataElementIdScheme();
    // Create meta-data maps
    CachingMap<String, DataSet> dataSetMap = new CachingMap<>();
    CachingMap<String, DataElement> dataElementMap = new CachingMap<>();
    // Get meta-data maps
    IdentifiableObjectCallable<DataSet> dataSetCallable = new IdentifiableObjectCallable<>(identifiableObjectManager, DataSet.class, dataSetIdScheme, null);
    IdentifiableObjectCallable<DataElement> dataElementCallable = new IdentifiableObjectCallable<>(identifiableObjectManager, DataElement.class, dataElementIdScheme, null);
    // Heat cache
    if (importOptions.isPreheatCacheDefaultFalse()) {
        dataSetMap.load(identifiableObjectManager.getAll(DataSet.class), o -> o.getPropertyValue(dataSetIdScheme));
        dataElementMap.load(identifiableObjectManager.getAll(DataElement.class), o -> o.getPropertyValue(dataElementIdScheme));
    }
    XMLReader adxReader = XMLFactory.getXMLReader(in);
    ImportSummary importSummary;
    adxReader.moveToStartElement(AdxDataService.ROOT, AdxDataService.NAMESPACE);
    ExecutorService executor = Executors.newSingleThreadExecutor();
    // Give the DXF import a different notification task ID so it doesn't conflict with notifications from this level.
    TaskId dxfTaskId = new TaskId(TaskCategory.DATAVALUE_IMPORT_INTERNAL, id.getUser());
    int groupCount = 0;
    try (PipedOutputStream pipeOut = new PipedOutputStream()) {
        Future<ImportSummary> futureImportSummary = executor.submit(new AdxPipedImporter(dataValueSetService, adxImportOptions, dxfTaskId, pipeOut, sessionFactory));
        XMLOutputFactory factory = XMLOutputFactory.newInstance();
        XMLStreamWriter dxfWriter = factory.createXMLStreamWriter(pipeOut);
        List<ImportConflict> adxConflicts = new LinkedList<>();
        dxfWriter.writeStartDocument("1.0");
        dxfWriter.writeStartElement("dataValueSet");
        dxfWriter.writeDefaultNamespace("http://dhis2.org/schema/dxf/2.0");
        notifier.notify(id, "Starting to import ADX data groups.");
        while (adxReader.moveToStartElement(AdxDataService.GROUP, AdxDataService.NAMESPACE)) {
            notifier.update(id, "Importing ADX data group: " + groupCount);
            // note this returns conflicts which are detected at ADX level
            adxConflicts.addAll(parseAdxGroupToDxf(adxReader, dxfWriter, adxImportOptions, dataSetMap, dataSetCallable, dataElementMap, dataElementCallable));
            groupCount++;
        }
        // end dataValueSet
        dxfWriter.writeEndElement();
        dxfWriter.writeEndDocument();
        pipeOut.flush();
        importSummary = futureImportSummary.get(TOTAL_MINUTES_TO_WAIT, TimeUnit.MINUTES);
        importSummary.getConflicts().addAll(adxConflicts);
        importSummary.getImportCount().incrementIgnored(adxConflicts.size());
    } catch (AdxException ex) {
        importSummary = new ImportSummary();
        importSummary.setStatus(ImportStatus.ERROR);
        importSummary.setDescription("Data set import failed within group number: " + groupCount);
        importSummary.getConflicts().add(ex.getImportConflict());
        notifier.update(id, NotificationLevel.ERROR, "ADX data import done", true);
        log.warn("Import failed: " + DebugUtils.getStackTrace(ex));
    } catch (IOException | XMLStreamException | InterruptedException | ExecutionException | TimeoutException ex) {
        importSummary = new ImportSummary();
        importSummary.setStatus(ImportStatus.ERROR);
        importSummary.setDescription("Data set import failed within group number: " + groupCount);
        notifier.update(id, NotificationLevel.ERROR, "ADX data import done", true);
        log.warn("Import failed: " + DebugUtils.getStackTrace(ex));
    }
    executor.shutdown();
    notifier.update(id, INFO, "ADX data import done", true).addTaskSummary(id, importSummary);
    ImportCount c = importSummary.getImportCount();
    log.info("ADX data import done, imported: " + c.getImported() + ", updated: " + c.getUpdated() + ", deleted: " + c.getDeleted() + ", ignored: " + c.getIgnored());
    return importSummary;
}

Example 33 with ImportOptions

use of org.hisp.dhis.dxf2.common.ImportOptions in project dhis2-core by dhis2.

the class EventController method putJsonEventForEventDate.

@RequestMapping(value = "/{uid}/eventDate", method = RequestMethod.PUT, consumes = "application/json")
@PreAuthorize("hasRole('ALL') or hasRole('F_TRACKED_ENTITY_DATAVALUE_ADD')")
public void putJsonEventForEventDate(HttpServletResponse response, HttpServletRequest request, @PathVariable("uid") String uid, ImportOptions importOptions) throws IOException, WebMessageException {
    if (!programStageInstanceService.programStageInstanceExists(uid)) {
        throw new WebMessageException(WebMessageUtils.notFound("Event not found for ID " + uid));
    }
    InputStream inputStream = StreamUtils.wrapAndCheckCompressionFormat(request.getInputStream());
    Event updatedEvent = renderService.fromJson(inputStream, Event.class);
    updatedEvent.setEvent(uid);
    eventService.updateEventForEventDate(updatedEvent);
    webMessageService.send(WebMessageUtils.ok("Event updated " + uid), response, request);
}

Example 34 with ImportOptions

use of org.hisp.dhis.dxf2.common.ImportOptions in project dhis2-core by dhis2.

the class EventController method postJsonEvent.

@RequestMapping(method = RequestMethod.POST, consumes = "application/json")
@PreAuthorize("hasRole('ALL') or hasRole('F_TRACKED_ENTITY_DATAVALUE_ADD')")
public void postJsonEvent(@RequestParam(defaultValue = "CREATE") ImportStrategy strategy, HttpServletResponse response, HttpServletRequest request, ImportOptions importOptions) throws Exception {
    importOptions.setImportStrategy(strategy);
    InputStream inputStream = StreamUtils.wrapAndCheckCompressionFormat(request.getInputStream());
    importOptions.setIdSchemes(getIdSchemesFromParameters(importOptions.getIdSchemes(), contextService.getParameterValuesMap()));
    if (!importOptions.isAsync()) {
        ImportSummaries importSummaries = eventService.addEventsJson(inputStream, importOptions);
        importSummaries.setImportOptions(importOptions);
        importSummaries.getImportSummaries().stream().filter(importSummary -> !importOptions.isDryRun() && !importSummary.getStatus().equals(ImportStatus.ERROR) && !importOptions.getImportStrategy().isDelete()).forEach(importSummary -> importSummary.setHref(ContextUtils.getRootPath(request) + RESOURCE_PATH + "/" + importSummary.getReference()));
        if (importSummaries.getImportSummaries().size() == 1) {
            ImportSummary importSummary = importSummaries.getImportSummaries().get(0);
            importSummary.setImportOptions(importOptions);
            if (!importOptions.isDryRun()) {
                if (!importSummary.getStatus().equals(ImportStatus.ERROR)) {
                    response.setHeader("Location", ContextUtils.getRootPath(request) + RESOURCE_PATH + "/" + importSummary.getReference());
                }
            }
        }
        webMessageService.send(WebMessageUtils.importSummaries(importSummaries), response, request);
    } else {
        TaskId taskId = new TaskId(TaskCategory.EVENT_IMPORT, currentUserService.getCurrentUser());
        List<Event> events = eventService.getEventsJson(inputStream);
        scheduler.executeTask(new ImportEventTask(events, eventService, importOptions, taskId));
        response.setHeader("Location", ContextUtils.getRootPath(request) + "/system/tasks/" + TaskCategory.EVENT_IMPORT);
        response.setStatus(HttpServletResponse.SC_NO_CONTENT);
    }
}

Example 35 with ImportOptions

use of org.hisp.dhis.dxf2.common.ImportOptions in project dhis2-core by dhis2.

the class EnrollmentController method postEnrollmentXml.

@RequestMapping(value = "", method = RequestMethod.POST, consumes = MediaType.APPLICATION_XML_VALUE, produces = MediaType.APPLICATION_XML_VALUE)
@PreAuthorize("hasRole('ALL') or hasRole('F_PROGRAM_ENROLLMENT')")
public void postEnrollmentXml(@RequestParam(defaultValue = "CREATE") ImportStrategy strategy, ImportOptions importOptions, HttpServletRequest request, HttpServletResponse response) throws IOException {
    importOptions.setStrategy(strategy);
    InputStream inputStream = StreamUtils.wrapAndCheckCompressionFormat(request.getInputStream());
    ImportSummaries importSummaries = enrollmentService.addEnrollmentsXml(inputStream, importOptions);
    importSummaries.setImportOptions(importOptions);
    response.setContentType(MediaType.APPLICATION_XML_VALUE);
    if (importSummaries.getImportSummaries().size() == 1) {
        ImportSummary importSummary = importSummaries.getImportSummaries().get(0);
        importSummary.setImportOptions(importOptions);
        if (!importSummary.getStatus().equals(ImportStatus.ERROR)) {
            response.setHeader("Location", getResourcePath(request, importSummary));
        }
    }
    response.setStatus(HttpServletResponse.SC_CREATED);
    webMessageService.send(WebMessageUtils.importSummaries(importSummaries), response, request);
}