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Example 61 with DataValue

use of org.hisp.dhis.dxf2.events.event.DataValue in project dhis2-core by dhis2.

the class JdbcEventStore method getEvents.

// -------------------------------------------------------------------------
// EventStore implementation
// -------------------------------------------------------------------------
@Override
public List<Event> getEvents(EventSearchParams params, List<OrganisationUnit> organisationUnits, Map<String, Set<String>> psdesWithSkipSyncTrue) {
    User user = currentUserService.getCurrentUser();
    setAccessiblePrograms(user, params);
    Map<String, Event> eventUidToEventMap = new HashMap<>(params.getPageSizeWithDefault());
    List<Event> events = new ArrayList<>();
    List<Long> relationshipIds = new ArrayList<>();
    final Gson gson = new Gson();
    String sql = buildSql(params, organisationUnits, user);
    SqlRowSet rowSet = jdbcTemplate.queryForRowSet(sql);
    log.debug("Event query SQL: " + sql);
    Set<String> notes = new HashSet<>();
    while (rowSet.next()) {
        if (rowSet.getString("psi_uid") == null || (params.getCategoryOptionCombo() == null && !isSuper(user) && !userHasAccess(rowSet))) {
            continue;
        }
        String psiUid = rowSet.getString("psi_uid");
        Event event;
        if (!eventUidToEventMap.containsKey(psiUid)) {
            validateIdentifiersPresence(rowSet, params.getIdSchemes(), true);
            event = new Event();
            eventUidToEventMap.put(psiUid, event);
            if (!params.isSkipEventId()) {
                event.setUid(psiUid);
                event.setEvent(psiUid);
            }
            event.setTrackedEntityInstance(rowSet.getString("tei_uid"));
            event.setStatus(EventStatus.valueOf(rowSet.getString("psi_status")));
            ProgramType programType = ProgramType.fromValue(rowSet.getString("p_type"));
            event.setProgram(rowSet.getString("p_identifier"));
            event.setProgramType(programType);
            event.setProgramStage(rowSet.getString("ps_identifier"));
            event.setOrgUnit(rowSet.getString("ou_identifier"));
            event.setDeleted(rowSet.getBoolean("psi_deleted"));
            if (programType != ProgramType.WITHOUT_REGISTRATION) {
                event.setEnrollment(rowSet.getString("pi_uid"));
                event.setEnrollmentStatus(EnrollmentStatus.fromProgramStatus(ProgramStatus.valueOf(rowSet.getString("pi_status"))));
                event.setFollowup(rowSet.getBoolean("pi_followup"));
            }
            if (params.getCategoryOptionCombo() == null && !isSuper(user)) {
                event.setOptionSize(rowSet.getInt("option_size"));
            }
            event.setAttributeOptionCombo(rowSet.getString("coc_identifier"));
            event.setAttributeCategoryOptions(rowSet.getString("deco_uid"));
            event.setTrackedEntityInstance(rowSet.getString("tei_uid"));
            event.setStoredBy(rowSet.getString("psi_storedby"));
            event.setOrgUnitName(rowSet.getString("ou_name"));
            event.setDueDate(DateUtils.getIso8601NoTz(rowSet.getDate("psi_duedate")));
            event.setEventDate(DateUtils.getIso8601NoTz(rowSet.getDate("psi_executiondate")));
            event.setCreated(DateUtils.getIso8601NoTz(rowSet.getDate("psi_created")));
            event.setCreatedByUserInfo(jsonToUserInfo(rowSet.getString("psi_createdbyuserinfo"), jsonMapper));
            event.setLastUpdated(DateUtils.getIso8601NoTz(rowSet.getDate("psi_lastupdated")));
            event.setLastUpdatedByUserInfo(jsonToUserInfo(rowSet.getString("psi_lastupdatedbyuserinfo"), jsonMapper));
            event.setCompletedBy(rowSet.getString("psi_completedby"));
            event.setCompletedDate(DateUtils.getIso8601NoTz(rowSet.getDate("psi_completeddate")));
            if (rowSet.getObject("psi_geometry") != null) {
                try {
                    Geometry geom = new WKTReader().read(rowSet.getString("psi_geometry"));
                    event.setGeometry(geom);
                } catch (ParseException e) {
                    log.error("Unable to read geometry for event '" + event.getUid() + "': ", e);
                }
            }
            if (rowSet.getObject("user_assigned") != null) {
                event.setAssignedUser(rowSet.getString("user_assigned"));
                event.setAssignedUserUsername(rowSet.getString("user_assigned_username"));
                event.setAssignedUserDisplayName(rowSet.getString("user_assigned_name"));
            }
            events.add(event);
        } else {
            event = eventUidToEventMap.get(psiUid);
            String attributeCategoryCombination = event.getAttributeCategoryOptions();
            String currentAttributeCategoryCombination = rowSet.getString("deco_uid");
            if (!attributeCategoryCombination.contains(currentAttributeCategoryCombination)) {
                event.setAttributeCategoryOptions(attributeCategoryCombination + ";" + currentAttributeCategoryCombination);
            }
        }
        if (!StringUtils.isEmpty(rowSet.getString("psi_eventdatavalues"))) {
            Set<EventDataValue> eventDataValues = convertEventDataValueJsonIntoSet(rowSet.getString("psi_eventdatavalues"));
            for (EventDataValue dv : eventDataValues) {
                DataValue dataValue = convertEventDataValueIntoDtoDataValue(dv);
                if (params.isSynchronizationQuery()) {
                    if (psdesWithSkipSyncTrue.containsKey(rowSet.getString("ps_uid")) && psdesWithSkipSyncTrue.get(rowSet.getString("ps_uid")).contains(dv.getDataElement())) {
                        dataValue.setSkipSynchronization(true);
                    } else {
                        dataValue.setSkipSynchronization(false);
                    }
                }
                event.getDataValues().add(dataValue);
            }
        }
        if (rowSet.getString("psinote_value") != null && !notes.contains(rowSet.getString("psinote_id"))) {
            Note note = new Note();
            note.setNote(rowSet.getString("psinote_uid"));
            note.setValue(rowSet.getString("psinote_value"));
            note.setStoredDate(DateUtils.getIso8601NoTz(rowSet.getDate("psinote_storeddate")));
            note.setStoredBy(rowSet.getString("psinote_storedby"));
            if (rowSet.getObject("usernote_id") != null) {
                note.setLastUpdatedBy(UserInfoSnapshot.of(rowSet.getLong("usernote_id"), rowSet.getString("usernote_code"), rowSet.getString("usernote_uid"), rowSet.getString("usernote_username"), rowSet.getString("userinfo_firstname"), rowSet.getString("userinfo_surname")));
            }
            note.setLastUpdated(rowSet.getDate("psinote_lastupdated"));
            event.getNotes().add(note);
            notes.add(rowSet.getString("psinote_id"));
        }
        if (params.isIncludeRelationships() && rowSet.getObject("psi_rl") != null) {
            PGobject pGobject = (PGobject) rowSet.getObject("psi_rl");
            if (pGobject != null) {
                String value = pGobject.getValue();
                relationshipIds.addAll(Lists.newArrayList(gson.fromJson(value, Long[].class)));
            }
        }
    }
    final Multimap<String, Relationship> map = eventStore.getRelationshipsByIds(relationshipIds);
    if (!map.isEmpty()) {
        events.forEach(e -> e.getRelationships().addAll(map.get(e.getEvent())));
    }
    IdSchemes idSchemes = ObjectUtils.firstNonNull(params.getIdSchemes(), new IdSchemes());
    IdScheme dataElementIdScheme = idSchemes.getDataElementIdScheme();
    if (dataElementIdScheme != IdScheme.ID && dataElementIdScheme != IdScheme.UID) {
        CachingMap<String, String> dataElementUidToIdentifierCache = new CachingMap<>();
        List<Collection<DataValue>> dataValuesList = events.stream().map(Event::getDataValues).collect(Collectors.toList());
        populateCache(dataElementIdScheme, dataValuesList, dataElementUidToIdentifierCache);
        convertDataValuesIdentifiers(dataElementIdScheme, dataValuesList, dataElementUidToIdentifierCache);
    }
    if (params.getCategoryOptionCombo() == null && !isSuper(user)) {
        return events.stream().filter(ev -> ev.getAttributeCategoryOptions() != null && splitToArray(ev.getAttributeCategoryOptions(), TextUtils.SEMICOLON).size() == ev.getOptionSize()).collect(Collectors.toList());
    }
    return events;
}
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Example 62 with DataValue

use of org.hisp.dhis.dxf2.events.event.DataValue in project dhis2-core by dhis2.

the class DefaultCsvEventService method writeEvents.

@Override
public void writeEvents(OutputStream outputStream, List<Event> events, boolean withHeader) throws IOException {
    ObjectWriter writer = CSV_MAPPER.writer(CSV_SCHEMA.withUseHeader(withHeader));
    List<CsvEventDataValue> dataValues = new ArrayList<>();
    for (Event event : events) {
        CsvEventDataValue templateDataValue = new CsvEventDataValue();
        templateDataValue.setEvent(event.getEvent());
        templateDataValue.setStatus(event.getStatus() != null ? event.getStatus().name() : null);
        templateDataValue.setProgram(event.getProgram());
        templateDataValue.setProgramStage(event.getProgramStage());
        templateDataValue.setEnrollment(event.getEnrollment());
        templateDataValue.setOrgUnit(event.getOrgUnit());
        templateDataValue.setEventDate(event.getEventDate());
        templateDataValue.setDueDate(event.getDueDate());
        templateDataValue.setStoredBy(event.getStoredBy());
        templateDataValue.setCompletedDate(event.getCompletedDate());
        templateDataValue.setCompletedBy(event.getCompletedBy());
        if (event.getGeometry() != null) {
            templateDataValue.setGeometry(event.getGeometry().toText());
            if (event.getGeometry().getGeometryType().equals("Point")) {
                templateDataValue.setLongitude(event.getGeometry().getCoordinate().x);
                templateDataValue.setLatitude(event.getGeometry().getCoordinate().y);
            }
        }
        for (DataValue value : event.getDataValues()) {
            CsvEventDataValue dataValue = new CsvEventDataValue(templateDataValue);
            dataValue.setDataElement(value.getDataElement());
            dataValue.setValue(value.getValue());
            dataValue.setProvidedElsewhere(value.getProvidedElsewhere());
            if (value.getStoredBy() != null) {
                dataValue.setStoredBy(value.getStoredBy());
            }
            dataValues.add(dataValue);
        }
    }
    writer.writeValue(outputStream, dataValues);
}
Also used : DataValue(org.hisp.dhis.dxf2.events.event.DataValue) ArrayList(java.util.ArrayList) ObjectWriter(com.fasterxml.jackson.databind.ObjectWriter) Event(org.hisp.dhis.dxf2.events.event.Event)

Example 63 with DataValue

use of org.hisp.dhis.dxf2.events.event.DataValue in project dhis2-core by dhis2.

the class AbstractUserInfoPreProcessor method process.

@Override
public void process(Event event, WorkContext workContext) {
    User user = findUserFromImportOptions(workContext.getImportOptions()).orElseGet(() -> getUser(workContext));
    if (user != null) {
        UserInfoSnapshot userInfo = UserInfoSnapshot.from(user);
        updateEventUserInfo(event, userInfo);
        Set<String> updatableDataValues = Optional.ofNullable(event).map(Event::getDataValues).orElse(Collections.emptySet()).stream().map(DataValue::getDataElement).collect(Collectors.toSet());
        Set<EventDataValue> eventDataValuesToUpdate = getWorkContextDataValueMapEntry(workContext, event.getUid()).stream().filter(eventDataValue -> updatableDataValues.contains(eventDataValue.getDataElement())).collect(Collectors.toSet());
        updateDataValuesUserInfo(getExistingPsi(workContext, event.getUid()), eventDataValuesToUpdate, userInfo);
    }
}
Also used : EventImporterUserService(org.hisp.dhis.dxf2.events.importer.EventImporterUserService) DataValue(org.hisp.dhis.dxf2.events.event.DataValue) ServiceDelegator(org.hisp.dhis.dxf2.events.importer.ServiceDelegator) UserInfoSnapshot(org.hisp.dhis.program.UserInfoSnapshot) Set(java.util.Set) ProgramStageInstance(org.hisp.dhis.program.ProgramStageInstance) Collectors(java.util.stream.Collectors) ImportOptions(org.hisp.dhis.dxf2.common.ImportOptions) Event(org.hisp.dhis.dxf2.events.event.Event) Processor(org.hisp.dhis.dxf2.events.importer.Processor) WorkContext(org.hisp.dhis.dxf2.events.importer.context.WorkContext) EventDataValue(org.hisp.dhis.eventdatavalue.EventDataValue) Optional(java.util.Optional) User(org.hisp.dhis.user.User) Collections(java.util.Collections) User(org.hisp.dhis.user.User) UserInfoSnapshot(org.hisp.dhis.program.UserInfoSnapshot) Event(org.hisp.dhis.dxf2.events.event.Event) EventDataValue(org.hisp.dhis.eventdatavalue.EventDataValue)

Example 64 with DataValue

use of org.hisp.dhis.dxf2.events.event.DataValue in project dhis2-core by dhis2.

the class EventStoredByPreProcessor method process.

@Override
public void process(Event event, WorkContext ctx) {
    final String storedBy = EventUtils.getValidUsername(event.getStoredBy(), ctx.getImportOptions());
    event.setStoredBy(storedBy);
    Set<DataValue> dataValues = event.getDataValues();
    for (DataValue dataValue : dataValues) {
        dataValue.setStoredBy(storedBy);
    }
}
Also used : DataValue(org.hisp.dhis.dxf2.events.event.DataValue)

Example 65 with DataValue

use of org.hisp.dhis.dxf2.events.event.DataValue in project dhis2-core by dhis2.

the class FilteredDataValueCheck method check.

@Override
public ImportSummary check(ImmutableEvent event, WorkContext ctx) {
    final Set<String> eventDataValuesUids = Optional.ofNullable(event).map(ImmutableEvent::getDataValues).orElse(Collections.emptySet()).stream().map(DataValue::getDataElement).collect(Collectors.toSet());
    final ImportSummary importSummary = new ImportSummary();
    if (!eventDataValuesUids.isEmpty() && Objects.nonNull(event) && StringUtils.isNotBlank(event.getProgramStage())) {
        Set<String> filteredEventDataValuesUids = getFilteredDataValues(event.getDataValues(), getDataElementUidsFromProgramStage(event.getProgramStage(), ctx)).stream().map(DataValue::getDataElement).collect(Collectors.toSet());
        Set<String> ignoredDataValues = eventDataValuesUids.stream().filter(uid -> !filteredEventDataValuesUids.contains(uid)).collect(Collectors.toSet());
        if (!ignoredDataValues.isEmpty()) {
            importSummary.setStatus(ImportStatus.WARNING);
            importSummary.setReference(event.getUid());
            importSummary.setDescription("Data Values " + ignoredDataValues.stream().collect(Collectors.joining(",", "[", "]")) + " ignored because " + "not defined in program stage " + event.getProgramStage());
            importSummary.incrementImported();
        }
    }
    return importSummary;
}
Also used : DataValue(org.hisp.dhis.dxf2.events.event.DataValue) Set(java.util.Set) Collectors(java.util.stream.Collectors) StringUtils(org.apache.commons.lang3.StringUtils) Objects(java.util.Objects) WorkContext(org.hisp.dhis.dxf2.events.importer.context.WorkContext) Component(org.springframework.stereotype.Component) ImportSummary(org.hisp.dhis.dxf2.importsummary.ImportSummary) FilteringOutUndeclaredDataElementsProcessor.getDataElementUidsFromProgramStage(org.hisp.dhis.dxf2.events.importer.shared.preprocess.FilteringOutUndeclaredDataElementsProcessor.getDataElementUidsFromProgramStage) ImmutableEvent(org.hisp.dhis.dxf2.events.importer.shared.ImmutableEvent) Checker(org.hisp.dhis.dxf2.events.importer.Checker) Optional(java.util.Optional) Collections(java.util.Collections) ImportStatus(org.hisp.dhis.dxf2.importsummary.ImportStatus) FilteringOutUndeclaredDataElementsProcessor.getFilteredDataValues(org.hisp.dhis.dxf2.events.importer.shared.preprocess.FilteringOutUndeclaredDataElementsProcessor.getFilteredDataValues) ImportSummary(org.hisp.dhis.dxf2.importsummary.ImportSummary) ImmutableEvent(org.hisp.dhis.dxf2.events.importer.shared.ImmutableEvent)

Aggregations

Test (org.junit.jupiter.api.Test)58 ImportSummary (org.hisp.dhis.dxf2.importsummary.ImportSummary)33 DataValue (org.hisp.dhis.dxf2.datavalue.DataValue)32 DataValue (org.hisp.dhis.datavalue.DataValue)31 DataSetContext (org.hisp.dhis.dxf2.datavalueset.ImportContext.DataSetContext)29 DataValueContext (org.hisp.dhis.dxf2.datavalueset.ImportContext.DataValueContext)28 DataElement (org.hisp.dhis.dataelement.DataElement)26 DataValue (org.hisp.dhis.dxf2.events.event.DataValue)26 TransactionalIntegrationTest (org.hisp.dhis.TransactionalIntegrationTest)21 Event (org.hisp.dhis.dxf2.events.event.Event)20 ClassPathResource (org.springframework.core.io.ClassPathResource)20 OrganisationUnit (org.hisp.dhis.organisationunit.OrganisationUnit)16 Period (org.hisp.dhis.period.Period)16 ImportOptions (org.hisp.dhis.dxf2.common.ImportOptions)11 WebMessageException (org.hisp.dhis.dxf2.webmessage.WebMessageException)11 ArrayList (java.util.ArrayList)10 Date (java.util.Date)10 ArgumentMatchers.anyString (org.mockito.ArgumentMatchers.anyString)9 CategoryOptionCombo (org.hisp.dhis.category.CategoryOptionCombo)8 User (org.hisp.dhis.user.User)8