use of org.hl7.fhir.dstu2.model.StringType in project cqf-ruler by DBCG.
the class Session method resolveActions.
private void resolveActions(List<PlanDefinition.PlanDefinitionActionComponent> actions, Context context, String patientId, RequestGroupBuilder requestGroupBuilder, List<RequestGroup.RequestGroupActionComponent> actionComponents, RequestDetails theRequest) {
for (PlanDefinition.PlanDefinitionActionComponent action : actions) {
boolean conditionsMet = true;
for (PlanDefinition.PlanDefinitionActionConditionComponent condition : action.getCondition()) {
if (condition.getKind() == PlanDefinition.ActionConditionKind.APPLICABILITY) {
if (!condition.hasExpression()) {
continue;
}
if (condition.hasExpression() && !condition.getExpression().hasExpression()) {
continue;
}
Object result = context.resolveExpressionRef(condition.getExpression().getExpression()).getExpression().evaluate(context);
if (!(result instanceof Boolean)) {
continue;
}
if (!(Boolean) result) {
conditionsMet = false;
}
}
if (conditionsMet) {
RequestGroupActionBuilder actionBuilder = new RequestGroupActionBuilder();
if (action.hasTitle()) {
actionBuilder.buildTitle(action.getTitle());
}
if (action.hasDescription()) {
actionBuilder.buildDescripition(action.getDescription());
}
// source
if (action.hasDocumentation()) {
RelatedArtifact artifact = action.getDocumentationFirstRep();
RelatedArtifactBuilder artifactBuilder = new RelatedArtifactBuilder();
if (artifact.hasDisplay()) {
artifactBuilder.buildDisplay(artifact.getDisplay());
}
if (artifact.hasUrl()) {
artifactBuilder.buildUrl(artifact.getUrl());
}
if (artifact.hasDocument() && artifact.getDocument().hasUrl()) {
AttachmentBuilder attachmentBuilder = new AttachmentBuilder();
attachmentBuilder.buildUrl(artifact.getDocument().getUrl());
artifactBuilder.buildDocument(attachmentBuilder.build());
}
actionBuilder.buildDocumentation(Collections.singletonList(artifactBuilder.build()));
}
// TODO - uuid
if (action.hasPrefix()) {
actionBuilder.buildPrefix(action.getPrefix());
}
if (action.hasType()) {
actionBuilder.buildType(action.getType());
}
if (action.hasDefinition()) {
if (action.getDefinitionCanonicalType().getValue().contains("ActivityDefinition")) {
ActivityDefinition activityDefinition = this.activityDefinitionDao.read(new IdType("ActivityDefinition", action.getDefinitionCanonicalType().getId()));
if (activityDefinition.hasDescription()) {
actionBuilder.buildDescripition(activityDefinition.getDescription());
}
try {
this.activityDefinitionApplyProvider.apply(theRequest, new IdType(action.getDefinitionCanonicalType().getId()), patientId, null, null, null, null, null, null, null, null).setId(UUID.randomUUID().toString());
} catch (FHIRException e) {
throw new RuntimeException("Error applying ActivityDefinition " + e.getMessage());
}
Parameters inParams = new Parameters();
inParams.addParameter().setName("patient").setValue(new StringType(patientId));
Parameters outParams = this.fhirContext.newRestfulGenericClient(theRequest.getFhirServerBase()).operation().onInstance(new IdDt("ActivityDefinition", action.getDefinition().getId())).named("$apply").withParameters(inParams).useHttpGet().execute();
List<Parameters.ParametersParameterComponent> response = outParams.getParameter();
Resource resource = response.get(0).getResource().setId(UUID.randomUUID().toString());
actionBuilder.buildResourceTarget(resource);
actionBuilder.buildResource(new ReferenceBuilder().buildReference(resource.getId()).build());
}
}
// on here...
if (action.hasDynamicValue()) {
for (PlanDefinition.PlanDefinitionActionDynamicValueComponent dynamicValue : action.getDynamicValue()) {
if (dynamicValue.hasPath() && dynamicValue.hasExpression()) {
if (dynamicValue.getPath().endsWith("title")) {
// summary
String title = (String) context.resolveExpressionRef(dynamicValue.getExpression().getExpression()).evaluate(context);
actionBuilder.buildTitle(title);
} else if (dynamicValue.getPath().endsWith("description")) {
// detail
String description = (String) context.resolveExpressionRef(dynamicValue.getExpression().getExpression()).evaluate(context);
actionBuilder.buildDescripition(description);
} else if (dynamicValue.getPath().endsWith("extension")) {
// indicator
String extension = (String) context.resolveExpressionRef(dynamicValue.getExpression().getExpression()).evaluate(context);
actionBuilder.buildExtension(extension);
}
}
}
}
if (!actionBuilder.build().isEmpty()) {
actionComponents.add(actionBuilder.build());
}
if (action.hasAction()) {
resolveActions(action.getAction(), context, patientId, requestGroupBuilder, actionComponents, theRequest);
}
}
}
}
requestGroupBuilder.buildAction(new ArrayList<>(actionComponents));
}
use of org.hl7.fhir.dstu2.model.StringType in project cqf-ruler by DBCG.
the class MeasureEvaluateProviderIT method testMeasureEvaluate.
@Test
public void testMeasureEvaluate() throws Exception {
String bundleAsText = stringFromResource("Exm105Fhir3Measure.json");
Bundle bundle = (Bundle) getFhirContext().newJsonParser().parseResource(bundleAsText);
getClient().transaction().withBundle(bundle).execute();
Parameters params = new Parameters();
params.addParameter().setName("periodStart").setValue(new StringType("2019-01-01"));
params.addParameter().setName("periodEnd").setValue(new StringType("2020-01-01"));
params.addParameter().setName("reportType").setValue(new StringType("individual"));
params.addParameter().setName("subject").setValue(new StringType("Patient/denom-EXM105-FHIR3"));
params.addParameter().setName("lastReceivedOn").setValue(new StringType("2019-12-12"));
MeasureReport returnMeasureReport = getClient().operation().onInstance(new IdType("Measure", "measure-EXM105-FHIR3-8.0.000")).named("$evaluate-measure").withParameters(params).returnResourceType(MeasureReport.class).execute();
assertNotNull(returnMeasureReport);
// System.out.println("Resource:"+this.getFhirContext().newJsonParser().setPrettyPrint(true).encodeResourceToString(returnMeasureReport));
}
use of org.hl7.fhir.dstu2.model.StringType in project cqf-ruler by DBCG.
the class MeasureEvaluateProviderIT method testMeasureEvaluateWithAdditionalData.
@Test
public void testMeasureEvaluateWithAdditionalData() throws Exception {
String mainBundleAsText = stringFromResource("Exm105FhirR3MeasurePartBundle.json");
Bundle bundle = (Bundle) getFhirContext().newJsonParser().parseResource(mainBundleAsText);
getClient().transaction().withBundle(bundle).execute();
String additionalBundleAsText = stringFromResource("Exm105FhirR3MeasureAdditionalData.json");
Bundle additionalData = (Bundle) getFhirContext().newJsonParser().parseResource(additionalBundleAsText);
Parameters params = new Parameters();
params.addParameter().setName("periodStart").setValue(new StringType("2019-01-01"));
params.addParameter().setName("periodEnd").setValue(new StringType("2020-01-01"));
params.addParameter().setName("reportType").setValue(new StringType("individual"));
params.addParameter().setName("subject").setValue(new StringType("Patient/denom-EXM105-FHIR3"));
params.addParameter().setName("lastReceivedOn").setValue(new StringType("2019-12-12"));
params.addParameter().setName("additionalData").setResource(additionalData);
MeasureReport returnMeasureReport = getClient().operation().onInstance(new IdType("Measure", "measure-EXM105-FHIR3-8.0.000")).named("$evaluate-measure").withParameters(params).returnResourceType(MeasureReport.class).execute();
assertNotNull(returnMeasureReport);
}
use of org.hl7.fhir.dstu2.model.StringType in project cqf-ruler by DBCG.
the class SubmitDataProviderIT method testSubmitDataNoId.
@Test
public void testSubmitDataNoId() {
// Create a MR and a resource
MeasureReport mr = newResource(MeasureReport.class).setMeasure(new Reference("Measure/123"));
Observation obs = newResource(Observation.class).setValue(new StringType("ABC"));
// Submit it
mySubmitDataProvider.submitData(new SystemRequestDetails(), new IdType("Measure", "123"), mr, Lists.newArrayList(obs));
// Check if they made it to the db
Observation savedObs = search(Observation.class, Searches.all()).single();
assertNotNull(savedObs);
assertEquals("ABC", savedObs.getValue().primitiveValue());
MeasureReport savedMr = search(MeasureReport.class, Searches.all()).single();
assertNotNull(savedMr);
assertEquals("Measure/123", savedMr.getMeasure().getReference());
}
use of org.hl7.fhir.dstu2.model.StringType in project cqf-ruler by DBCG.
the class Patients method jane_doe.
public static Patient jane_doe() {
Patient patient = new Patient();
patient.setId("jane-doe");
patient.setName(Arrays.asList(new HumanName().setFamily("Doe").setGiven(Arrays.asList(new StringType("Jane")))));
patient.setBirthDate(new Date());
patient.setGender(AdministrativeGender.FEMALE);
Extension usCoreRace = new Extension();
usCoreRace.setUrl(EXT_URL_US_CORE_RACE).addExtension().setUrl(OMB_CATEGORY).setValue(new Coding().setSystem(URL_SYSTEM_RACE).setCode(OMB_CATEGORY_RACE_BLACK).setDisplay(BLACK_OR_AFRICAN_AMERICAN));
patient.getExtension().add(usCoreRace);
return patient;
}
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