use of org.hl7.fhir.dstu2016may.model.RiskAssessment in project org.hl7.fhir.core by hapifhir.
the class RdfParser method composeRiskAssessmentRiskAssessmentPredictionComponent.
protected void composeRiskAssessmentRiskAssessmentPredictionComponent(Complex parent, String parentType, String name, RiskAssessment.RiskAssessmentPredictionComponent element, int index) {
if (element == null)
return;
Complex t;
if (Utilities.noString(parentType))
t = parent;
else {
t = parent.predicate("fhir:" + parentType + '.' + name);
}
composeBackboneElement(t, "prediction", name, element, index);
if (element.hasOutcome())
composeCodeableConcept(t, "RiskAssessment", "outcome", element.getOutcome(), -1);
if (element.hasProbability())
composeType(t, "RiskAssessment", "probability", element.getProbability(), -1);
if (element.hasQualitativeRisk())
composeCodeableConcept(t, "RiskAssessment", "qualitativeRisk", element.getQualitativeRisk(), -1);
if (element.hasRelativeRiskElement())
composeDecimal(t, "RiskAssessment", "relativeRisk", element.getRelativeRiskElement(), -1);
if (element.hasWhen())
composeType(t, "RiskAssessment", "when", element.getWhen(), -1);
if (element.hasRationaleElement())
composeString(t, "RiskAssessment", "rationale", element.getRationaleElement(), -1);
}
use of org.hl7.fhir.dstu2016may.model.RiskAssessment in project org.hl7.fhir.core by hapifhir.
the class RdfParser method composeRiskAssessment.
protected void composeRiskAssessment(Complex parent, String parentType, String name, RiskAssessment element, int index) {
if (element == null)
return;
Complex t;
if (Utilities.noString(parentType))
t = parent;
else {
t = parent.predicate("fhir:" + parentType + '.' + name);
}
composeDomainResource(t, "RiskAssessment", name, element, index);
for (int i = 0; i < element.getIdentifier().size(); i++) composeIdentifier(t, "RiskAssessment", "identifier", element.getIdentifier().get(i), i);
if (element.hasBasedOn())
composeReference(t, "RiskAssessment", "basedOn", element.getBasedOn(), -1);
if (element.hasParent())
composeReference(t, "RiskAssessment", "parent", element.getParent(), -1);
if (element.hasStatusElement())
composeEnum(t, "RiskAssessment", "status", element.getStatusElement(), -1);
if (element.hasMethod())
composeCodeableConcept(t, "RiskAssessment", "method", element.getMethod(), -1);
if (element.hasCode())
composeCodeableConcept(t, "RiskAssessment", "code", element.getCode(), -1);
if (element.hasSubject())
composeReference(t, "RiskAssessment", "subject", element.getSubject(), -1);
if (element.hasEncounter())
composeReference(t, "RiskAssessment", "encounter", element.getEncounter(), -1);
if (element.hasOccurrence())
composeType(t, "RiskAssessment", "occurrence", element.getOccurrence(), -1);
if (element.hasCondition())
composeReference(t, "RiskAssessment", "condition", element.getCondition(), -1);
if (element.hasPerformer())
composeReference(t, "RiskAssessment", "performer", element.getPerformer(), -1);
for (int i = 0; i < element.getReasonCode().size(); i++) composeCodeableConcept(t, "RiskAssessment", "reasonCode", element.getReasonCode().get(i), i);
for (int i = 0; i < element.getReasonReference().size(); i++) composeReference(t, "RiskAssessment", "reasonReference", element.getReasonReference().get(i), i);
for (int i = 0; i < element.getBasis().size(); i++) composeReference(t, "RiskAssessment", "basis", element.getBasis().get(i), i);
for (int i = 0; i < element.getPrediction().size(); i++) composeRiskAssessmentRiskAssessmentPredictionComponent(t, "RiskAssessment", "prediction", element.getPrediction().get(i), i);
if (element.hasMitigationElement())
composeString(t, "RiskAssessment", "mitigation", element.getMitigationElement(), -1);
for (int i = 0; i < element.getNote().size(); i++) composeAnnotation(t, "RiskAssessment", "note", element.getNote().get(i), i);
}
use of org.hl7.fhir.dstu2016may.model.RiskAssessment in project org.hl7.fhir.core by hapifhir.
the class TurtleTests method test_riskassessment_example_population.
@Test
public void test_riskassessment_example_population() throws FileNotFoundException, IOException, Exception {
System.out.println("riskassessment-example-population.ttl");
new Turtle().parse(TextFile.fileToString("C:\\work\\org.hl7.fhir\\build\\publish\\riskassessment-example-population.ttl"));
}
use of org.hl7.fhir.dstu2016may.model.RiskAssessment in project himss_2021_sepsis_detection by redhat-na-ssa.
the class RiskAssessmentService method createRiskAssessment.
private RiskAssessment createRiskAssessment(Patient patient, String sepsisResponse, String observationId, String correlationKey) {
RiskAssessment assessment = new RiskAssessment();
Reference ref = new Reference();
ref.setReference(patient.getId());
assessment.setSubject(ref);
assessment.addIdentifier().setValue(correlationKey);
assessment.setBasedOn(new Reference("Observation/" + observationId));
assessment.setStatus(RiskAssessmentStatus.PRELIMINARY);
Coding coding = new Coding("http://browser.ihtsdotools.org/", "AIMODEL", "Inference of Sepsis");
CodeableConcept concept = new CodeableConcept(coding);
assessment.setCode(concept);
RiskAssessmentPredictionComponent component = new RiskAssessmentPredictionComponent();
String display = "Not Detected";
if (sepsisResponse.equals("1"))
display = "Detected";
component.setOutcome(new CodeableConcept(new Coding("http://browser.ihtsdotools.org/", "1", display)));
List<RiskAssessmentPredictionComponent> predictionsList = new ArrayList<RiskAssessmentPredictionComponent>();
predictionsList.add(component);
assessment.setPrediction(predictionsList);
return assessment;
}
use of org.hl7.fhir.dstu2016may.model.RiskAssessment in project himss_2021_sepsis_detection by redhat-na-ssa.
the class RiskAssessmentUtil method getCode.
public static String getCode(RiskAssessment rAssessment) {
RiskAssessmentPredictionComponent raPredictionComponent = rAssessment.getPredictionFirstRep();
Property cProp = raPredictionComponent.getOutcome().getChildByName("coding");
Coding coding = (Coding) cProp.getValues().get(0);
String code = coding.getCode();
log.info("getCode() code = " + code);
return code;
}
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